; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Csor.00g012010 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g012010
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionselT-like protein
Genome locationCsor_Chr02:4637313..4638507
RNA-Seq ExpressionCsor.00g012010
SyntenyCsor.00g012010
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605410.1 hypothetical protein SDJN03_02727, partial [Cucurbita argyrosperma subsp. sororia]7.24e-69100Show/hide
Query:  MDRGILVLAFLVLQLSVSFESDDCGQFHSDDCGQFHSDANVEFESDTERYDLIKLSSPCSDRVTSMSIKLLVQEHFPGIIVTLSHYPPAQPILLLRNLYQ
        MDRGILVLAFLVLQLSVSFESDDCGQFHSDDCGQFHSDANVEFESDTERYDLIKLSSPCSDRVTSMSIKLLVQEHFPGIIVTLSHYPPAQPILLLRNLYQ
Subjt:  MDRGILVLAFLVLQLSVSFESDDCGQFHSDDCGQFHSDANVEFESDTERYDLIKLSSPCSDRVTSMSIKLLVQEHFPGIIVTLSHYPPAQPILLLRNLYQ

Query:  LHKY
        LHKY
Subjt:  LHKY

KAG7035360.1 hypothetical protein SDJN02_02155, partial [Cucurbita argyrosperma subsp. argyrosperma]1.23e-2576.56Show/hide
Query:  FESDDCGQFHSDDCGQFHSDANVEFESDTERYDLIKLSSPCSDRVT-------SMSIKLLVQEH
        FESDDCGQFHSDDCGQFHSDANVEFESDTERYDLIKLSSPCSDR +       S ++ L V+EH
Subjt:  FESDDCGQFHSDDCGQFHSDANVEFESDTERYDLIKLSSPCSDRVT-------SMSIKLLVQEH

XP_022148433.1 selT-like protein [Momordica charantia]1.37e-0678.38Show/hide
Query:  LIKLSSPCSDRVTSMSIKLLVQEHFPGIIVTLSHYPP
        LIK SS CS R TSMSIKLLV E+FPGI VTLSH+PP
Subjt:  LIKLSSPCSDRVTSMSIKLLVQEHFPGIIVTLSHYPP

TrEMBL top hitse value%identityAlignment
A0A6J1D431 selT-like protein6.62e-0778.38Show/hide
Query:  LIKLSSPCSDRVTSMSIKLLVQEHFPGIIVTLSHYPP
        LIK SS CS R TSMSIKLLV E+FPGI VTLSH+PP
Subjt:  LIKLSSPCSDRVTSMSIKLLVQEHFPGIIVTLSHYPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCGAGGAATATTGGTTCTTGCATTTCTGGTGCTTCAGTTATCTGTTTCGTTTGAATCAGACGATTGCGGCCAGTTTCATTCAGACGATTGCGGCCAGTTTCATTC
AGACGCAAATGTAGAGTTTGAATCAGACACAGAGAGATACGATCTCATCAAACTCAGCTCTCCGTGCTCTGATAGAGTGACCTCCATGTCGATTAAGTTGCTGGTGCAGG
AACATTTTCCTGGAATCATTGTTACTCTTTCTCATTATCCTCCGGCTCAGCCAATTCTATTGCTTCGAAACCTATATCAACTGCACAAATATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATCGAGGAATATTGGTTCTTGCATTTCTGGTGCTTCAGTTATCTGTTTCGTTTGAATCAGACGATTGCGGCCAGTTTCATTCAGACGATTGCGGCCAGTTTCATTC
AGACGCAAATGTAGAGTTTGAATCAGACACAGAGAGATACGATCTCATCAAACTCAGCTCTCCGTGCTCTGATAGAGTGACCTCCATGTCGATTAAGTTGCTGGTGCAGG
AACATTTTCCTGGAATCATTGTTACTCTTTCTCATTATCCTCCGGCTCAGCCAATTCTATTGCTTCGAAACCTATATCAACTGCACAAATATTGA
Protein sequenceShow/hide protein sequence
MDRGILVLAFLVLQLSVSFESDDCGQFHSDDCGQFHSDANVEFESDTERYDLIKLSSPCSDRVTSMSIKLLVQEHFPGIIVTLSHYPPAQPILLLRNLYQLHKY