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Csor.00g016560 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g016560
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionEncodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich).
Genome locationCsor_Chr13:572086..575756
RNA-Seq ExpressionCsor.00g016560
SyntenyCsor.00g016560
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583402.1 hypothetical protein SDJN03_19334, partial [Cucurbita argyrosperma subsp. sororia]6.60e-124100Show/hide
Query:  MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS
        MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS
Subjt:  MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS

Query:  PSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGTDKDDCLALVAHEFPPIFQGIHNEAAQWSFELDLRYIVYTISN
        PSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGTDKDDCLALVAHEFPPIFQGIHNEAAQWSFELDLRYIVYTISN
Subjt:  PSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGTDKDDCLALVAHEFPPIFQGIHNEAAQWSFELDLRYIVYTISN

KAG7019166.1 hypothetical protein SDJN02_18124 [Cucurbita argyrosperma subsp. argyrosperma]7.12e-11989.74Show/hide
Query:  MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS
        MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS
Subjt:  MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS

Query:  PSPAPT--------------------LKKSGGEDDPNGNNFQPASRGNWWQGTDKDDCLALVAHEFPPIFQGIHNEAAQWSFELDLRYIVYTISN
        PSPAPT                    LKKSGGEDDPNGNNFQPASRGNWWQGTDKDDCLALVAHEFPPIFQGIHNEAAQWSFELDLRYIVYTISN
Subjt:  PSPAPT--------------------LKKSGGEDDPNGNNFQPASRGNWWQGTDKDDCLALVAHEFPPIFQGIHNEAAQWSFELDLRYIVYTISN

XP_022964980.1 uncharacterized protein LOC111464929 [Cucurbita moschata]1.16e-8899.25Show/hide
Query:  MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS
        MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS
Subjt:  MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS

Query:  PSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGT
        PSPAPTLKKSGGEDDPNGNNFQPASRGNWWQG+
Subjt:  PSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGT

XP_022970583.1 uncharacterized protein LOC111469517 [Cucurbita maxima]1.36e-8798.5Show/hide
Query:  MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS
        MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAG S
Subjt:  MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS

Query:  PSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGT
        PSPAPTLKKSGGEDDPNGNNFQPASRGNWWQG+
Subjt:  PSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGT

XP_038894691.1 uncharacterized protein LOC120083160 [Benincasa hispida]2.76e-7387.22Show/hide
Query:  MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS
        MEGKSKGYQASSFVADLFDVKEPP +S+S VFAAIF SPQKG GRNSSSSGDWLKQ NGNQP H RQGNSG SLEPCHLSSSLYYGGQDGYSQAPSAG S
Subjt:  MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS

Query:  PSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGT
        P   PT+KKSGGEDDPNGNN QPASRGNWWQG+
Subjt:  PSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGT

TrEMBL top hitse value%identityAlignment
A0A0A0LXG9 Uncharacterized protein1.14e-6882.35Show/hide
Query:  MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS
        MEGKSKGYQASSFVADLFDVKE P +S+S  FA IFPSPQKG GRNSSSS DWLKQ NG+QP H RQGNSGGSLEPCHLSSSLYYGGQDGYSQA SAG S
Subjt:  MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS

Query:  PSPAP--TLKKSGGE-DDPNGNNFQPASRGNWWQGT
        P P P  T+KKSGG+ DDPNGNN QPASRGNWWQG+
Subjt:  PSPAP--TLKKSGGE-DDPNGNNFQPASRGNWWQGT

A0A1S3C5M6 uncharacterized protein LOC1034971234.84e-7083.09Show/hide
Query:  MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS
        MEGKSKGYQ SSFVADLFDVKE P +S+S  FA IFPSPQKG GRNSSSS DWLKQ NGNQP H RQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAG S
Subjt:  MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS

Query:  PSPAP--TLKKSGGE-DDPNGNNFQPASRGNWWQGT
        P P P  T+KKSGG+ DDPNGNN QPASRGNWWQG+
Subjt:  PSPAP--TLKKSGGE-DDPNGNNFQPASRGNWWQGT

A0A5D3BEB7 Uncharacterized protein4.84e-7083.09Show/hide
Query:  MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS
        MEGKSKGYQ SSFVADLFDVKE P +S+S  FA IFPSPQKG GRNSSSS DWLKQ NGNQP H RQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAG S
Subjt:  MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS

Query:  PSPAP--TLKKSGGE-DDPNGNNFQPASRGNWWQGT
        P P P  T+KKSGG+ DDPNGNN QPASRGNWWQG+
Subjt:  PSPAP--TLKKSGGE-DDPNGNNFQPASRGNWWQGT

A0A6J1HJ44 uncharacterized protein LOC1114649295.63e-8999.25Show/hide
Query:  MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS
        MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS
Subjt:  MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS

Query:  PSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGT
        PSPAPTLKKSGGEDDPNGNNFQPASRGNWWQG+
Subjt:  PSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGT

A0A6J1I4B7 uncharacterized protein LOC1114695176.57e-8898.5Show/hide
Query:  MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS
        MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAG S
Subjt:  MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLS

Query:  PSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGT
        PSPAPTLKKSGGEDDPNGNNFQPASRGNWWQG+
Subjt:  PSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G39855.2 unknown protein1.7e-0634.17Show/hide
Query:  STSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLE-----------PCHLSSSLYYGGQDGYSQAPSAGLSPSPAPTLKKSGGE
        S+S++ +F +IFP P      N +S     K    N  +   +G    + E           PC+LSSS+YYGGQD YS       S +     KK G E
Subjt:  STSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLE-----------PCHLSSSLYYGGQDGYSQAPSAGLSPSPAPTLKKSGGE

Query:  DDPNGNNFQPASRGNWWQGT
         D      + ASRGNWW+G+
Subjt:  DDPNGNNFQPASRGNWWQGT

AT3G55646.1 unknown protein1.1e-0736.24Show/hide
Query:  EGKSKGYQASSFVADL--FD------VKEPPSTSSSEVFAAIFPSP---QKGGGRNSSSSGDWLKQANGN---QPSHARQGNSGGSLE---PCHLSSSLY
        + K K   ASS  + L  FD      V    S+S++ +F +IFP P   Q G   + +S G  +K  + N   + S+ ++  S  + E   PCHLSSSLY
Subjt:  EGKSKGYQASSFVADL--FD------VKEPPSTSSSEVFAAIFPSP---QKGGGRNSSSSGDWLKQANGN---QPSHARQGNSGGSLE---PCHLSSSLY

Query:  YGGQDGYSQAPSAGLSPSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGT
        YGGQ+ YS       + +   T KK G E D      + ASRGNWW+G+
Subjt:  YGGQDGYSQAPSAGLSPSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGT

AT5G02020.1 Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich).8.2e-1440.65Show/hide
Query:  MEGKSK------GYQASSFVADLFDVKEPPST-SSSEVFAAIFPSPQKGGGRNS-----SSSGDW---LKQANGNQPSHARQGNSGGS-------LEPCH
        MEG+ K         +SS  ++LF  +E PS+ SSS +  +IFP P K  GR S      + G W     +  GN   +  Q  + GS       ++PCH
Subjt:  MEGKSK------GYQASSFVADLFDVKEPPST-SSSEVFAAIFPSPQKGGGRNS-----SSSGDW---LKQANGNQPSHARQGNSGGS-------LEPCH

Query:  LSSSLYYGGQDGYSQAPSAGLSPSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGT
        LSSS+YYGG D Y Q P    S S   T KK GGEDD        ASRGNWWQG+
Subjt:  LSSSLYYGGQDGYSQAPSAGLSPSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGT

AT5G02020.2 Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich).7.4e-0737.39Show/hide
Query:  MEGKSK------GYQASSFVADLFDVKEPPST-SSSEVFAAIFPSPQKGGGRNS-----SSSGDW---LKQANGNQPSHARQGNSGGS-------LEPCH
        MEG+ K         +SS  ++LF  +E PS+ SSS +  +IFP P K  GR S      + G W     +  GN   +  Q  + GS       ++PCH
Subjt:  MEGKSK------GYQASSFVADLFDVKEPPST-SSSEVFAAIFPSPQKGGGRNS-----SSSGDW---LKQANGNQPSHARQGNSGGS-------LEPCH

Query:  LSSSLYYGGQDGYSQ
        LSSS+YYGG D Y Q
Subjt:  LSSSLYYGGQDGYSQ

AT5G59080.1 unknown protein5.3e-2145.65Show/hide
Query:  MEGK----SKGYQASSFVADLFDVKEP-PSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAP
        MEGK    S    +SSF A+LF  K+P P +SSS +F+ +FP P KG  R+ S+S     QA   +  +A++      +EPCHLSSSLYYGGQD Y+++ 
Subjt:  MEGK----SKGYQASSFVADLFDVKEP-PSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAP

Query:  SAGLSPSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGT
        +    P P    ++  GEDD NG N Q  SRGNWWQG+
Subjt:  SAGLSPSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGAAAGTCTAAAGGGTATCAAGCCTCCTCTTTCGTTGCTGATCTTTTCGATGTCAAGGAGCCGCCATCAACTTCTTCATCAGAAGTCTTTGCAGCAATC
TTTCCTTCTCCACAGAAGGGGGGAGGCAGGAATTCTTCTAGCTCTGGGGATTGGCTAAAACAGGCCAATGGAAATCAACCATCCCACGCCAGACAAGGAAATTCA
GGAGGGAGCTTGGAGCCTTGTCATCTGAGTTCATCTCTATACTATGGAGGACAAGATGGTTACTCCCAGGCCCCATCAGCTGGACTATCCCCATCCCCTGCCCCC
ACTTTGAAGAAAAGTGGGGGAGAAGATGATCCAAATGGAAACAACTTCCAACCTGCTTCTAGGGGAAATTGGTGGCAAGGTACAGATAAAGACGACTGCCTTGCC
TTGGTGGCGCATGAATTCCCTCCTATTTTCCAAGGAATTCATAACGAAGCTGCGCAGTGGAGCTTTGAGTTGGATTTACGTTACATTGTGTATACCATTTCAAAT
TAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGGAAAGTCTAAAGGGTATCAAGCCTCCTCTTTCGTTGCTGATCTTTTCGATGTCAAGGAGCCGCCATCAACTTCTTCATCAGAAGTCTTTGCAGCAATC
TTTCCTTCTCCACAGAAGGGGGGAGGCAGGAATTCTTCTAGCTCTGGGGATTGGCTAAAACAGGCCAATGGAAATCAACCATCCCACGCCAGACAAGGAAATTCA
GGAGGGAGCTTGGAGCCTTGTCATCTGAGTTCATCTCTATACTATGGAGGACAAGATGGTTACTCCCAGGCCCCATCAGCTGGACTATCCCCATCCCCTGCCCCC
ACTTTGAAGAAAAGTGGGGGAGAAGATGATCCAAATGGAAACAACTTCCAACCTGCTTCTAGGGGAAATTGGTGGCAAGGTACAGATAAAGACGACTGCCTTGCC
TTGGTGGCGCATGAATTCCCTCCTATTTTCCAAGGAATTCATAACGAAGCTGCGCAGTGGAGCTTTGAGTTGGATTTACGTTACATTGTGTATACCATTTCAAAT
TAA
Protein sequenceShow/hide protein sequence
MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLSPSPAP
TLKKSGGEDDPNGNNFQPASRGNWWQGTDKDDCLALVAHEFPPIFQGIHNEAAQWSFELDLRYIVYTISN