; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Csor.00g020800 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g020800
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description40S ribosomal protein S16
Genome locationCsor_Chr04:2493361..2494398
RNA-Seq ExpressionCsor.00g020800
SyntenyCsor.00g020800
Gene Ontology termsGO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0006412 - translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000754 - Ribosomal protein S9
IPR014721 - Ribosomal protein S5 domain 2-type fold, subgroup
IPR020568 - Ribosomal protein S5 domain 2-type fold
IPR020574 - Ribosomal protein S9, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600317.1 40S ribosomal protein S16, partial [Cucurbita argyrosperma subsp. sororia]8.37e-109100Show/hide
Query:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
        MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
Subjt:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE

Query:  QSKKEIKDILSTREASGKGVSRLPKWLLIDLDKFWILSGIAYWSELHHTRWN
        QSKKEIKDILSTREASGKGVSRLPKWLLIDLDKFWILSGIAYWSELHHTRWN
Subjt:  QSKKEIKDILSTREASGKGVSRLPKWLLIDLDKFWILSGIAYWSELHHTRWN

XP_004136973.1 40S ribosomal protein S16 [Cucumis sativus]5.02e-72100Show/hide
Query:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
        MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
Subjt:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE

Query:  QSKKEIKDIL
        QSKKEIKDIL
Subjt:  QSKKEIKDIL

XP_022149351.1 40S ribosomal protein S16-like [Momordica charantia]7.12e-7299.09Show/hide
Query:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
        MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIEL+EPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
Subjt:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE

Query:  QSKKEIKDIL
        QSKKEIKDIL
Subjt:  QSKKEIKDIL

XP_022989000.1 40S ribosomal protein S16-like [Cucurbita maxima]1.44e-7199.09Show/hide
Query:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
        MA+PIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
Subjt:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE

Query:  QSKKEIKDIL
        QSKKEIKDIL
Subjt:  QSKKEIKDIL

XP_040987369.1 40S ribosomal protein S16 [Juglans microcarpa x Juglans regia]2.04e-7198.18Show/hide
Query:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
        MAAP+ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRF+GVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
Subjt:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE

Query:  QSKKEIKDIL
        QSKKEIKDIL
Subjt:  QSKKEIKDIL

TrEMBL top hitse value%identityAlignment
A0A0A0L6F6 Uncharacterized protein2.43e-72100Show/hide
Query:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
        MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
Subjt:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE

Query:  QSKKEIKDIL
        QSKKEIKDIL
Subjt:  QSKKEIKDIL

A0A1S3C210 40S ribosomal protein S162.43e-72100Show/hide
Query:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
        MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
Subjt:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE

Query:  QSKKEIKDIL
        QSKKEIKDIL
Subjt:  QSKKEIKDIL

A0A6J1D637 40S ribosomal protein S162.43e-72100Show/hide
Query:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
        MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
Subjt:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE

Query:  QSKKEIKDIL
        QSKKEIKDIL
Subjt:  QSKKEIKDIL

A0A6J1FW85 40S ribosomal protein S16-like2.43e-72100Show/hide
Query:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
        MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
Subjt:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE

Query:  QSKKEIKDIL
        QSKKEIKDIL
Subjt:  QSKKEIKDIL

A0A6J1J781 40S ribosomal protein S16-like2.43e-72100Show/hide
Query:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
        MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
Subjt:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE

Query:  QSKKEIKDIL
        QSKKEIKDIL
Subjt:  QSKKEIKDIL

SwissProt top hitse value%identityAlignment
O22647 40S ribosomal protein S161.5e-4886.49Show/hide
Query:  MAAP-IESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVD
        MA P  ESVQCFGRKKTAVAVT+CKRGRGLIK+NG PIELV+PEILR+KA+EPILLLGRHRF GVDMRIRV+GGG TSQIYAIRQSIAKALVA+YQKYVD
Subjt:  MAAP-IESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVD

Query:  EQSKKEIKDIL
        EQ+KKE+KDIL
Subjt:  EQSKKEIKDIL

P46293 40S ribosomal protein S164.9e-5296.23Show/hide
Query:  IESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKK
        IESVQCFGRKKTAVAVT+CKRGRGLIKINGCPIELVEPEILRFKA EPILLLGR RF+GVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKK
Subjt:  IESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKK

Query:  EIKDIL
        EIKDIL
Subjt:  EIKDIL

Q42340 40S ribosomal protein S16-31.9e-4886.67Show/hide
Query:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKE
        ESVQCFGRKKTAVAVT+CKRG GLIK+NGCPIEL +PEILRFK +EP+LLLG+HRF+GV+MRIRV GGGHTSQ+YAIRQSIAKALVA+YQKYVDEQSKKE
Subjt:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKE

Query:  IKDIL
        IKDIL
Subjt:  IKDIL

Q9M8X9 40S ribosomal protein S16-26.9e-4682.86Show/hide
Query:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKE
        ESVQCFGRKKTA AVTYCKRG G+IK+NG PIEL +PEILRFK +EP+LLLG+HRF+GVDMRIR  GGG+TS++YAIRQSIAKALVA+YQKYVDEQSKKE
Subjt:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKE

Query:  IKDIL
        IKDIL
Subjt:  IKDIL

Q9SK22 40S ribosomal protein S16-11.5e-4887.62Show/hide
Query:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKE
        ESVQCFGRKKTAVAVT+CKRG GLIK+NGCPIEL +PEILRFK +EPILLLG+HRF+GV+MRIRV GGGHTSQ+YAIRQSIAKALVA+YQKYVDEQSKKE
Subjt:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKE

Query:  IKDIL
        IKDIL
Subjt:  IKDIL

Arabidopsis top hitse value%identityAlignment
AT2G09990.1 Ribosomal protein S5 domain 2-like superfamily protein1.0e-4987.62Show/hide
Query:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKE
        ESVQCFGRKKTAVAVT+CKRG GLIK+NGCPIEL +PEILRFK +EPILLLG+HRF+GV+MRIRV GGGHTSQ+YAIRQSIAKALVA+YQKYVDEQSKKE
Subjt:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKE

Query:  IKDIL
        IKDIL
Subjt:  IKDIL

AT3G04230.1 Ribosomal protein S5 domain 2-like superfamily protein4.9e-4782.86Show/hide
Query:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKE
        ESVQCFGRKKTA AVTYCKRG G+IK+NG PIEL +PEILRFK +EP+LLLG+HRF+GVDMRIR  GGG+TS++YAIRQSIAKALVA+YQKYVDEQSKKE
Subjt:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKE

Query:  IKDIL
        IKDIL
Subjt:  IKDIL

AT5G18380.1 Ribosomal protein S5 domain 2-like superfamily protein1.4e-4986.67Show/hide
Query:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKE
        ESVQCFGRKKTAVAVT+CKRG GLIK+NGCPIEL +PEILRFK +EP+LLLG+HRF+GV+MRIRV GGGHTSQ+YAIRQSIAKALVA+YQKYVDEQSKKE
Subjt:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKE

Query:  IKDIL
        IKDIL
Subjt:  IKDIL

AT5G18380.2 Ribosomal protein S5 domain 2-like superfamily protein1.4e-4986.67Show/hide
Query:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKE
        ESVQCFGRKKTAVAVT+CKRG GLIK+NGCPIEL +PEILRFK +EP+LLLG+HRF+GV+MRIRV GGGHTSQ+YAIRQSIAKALVA+YQKYVDEQSKKE
Subjt:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKE

Query:  IKDIL
        IKDIL
Subjt:  IKDIL

AT5G18380.3 Ribosomal protein S5 domain 2-like superfamily protein1.4e-4986.67Show/hide
Query:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKE
        ESVQCFGRKKTAVAVT+CKRG GLIK+NGCPIEL +PEILRFK +EP+LLLG+HRF+GV+MRIRV GGGHTSQ+YAIRQSIAKALVA+YQKYVDEQSKKE
Subjt:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKE

Query:  IKDIL
        IKDIL
Subjt:  IKDIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCTCCGATCGAATCGGTGCAATGTTTCGGACGCAAGAAGACGGCGGTGGCCGTCACCTACTGCAAACGCGGCAGGGGTTTGATTAAGATCAACGGCTGTCCAAT
CGAGCTTGTTGAGCCAGAGATCTTGCGCTTCAAGGCCTACGAGCCAATCCTCCTCCTTGGACGTCACCGTTTCTCTGGTGTCGATATGCGCATCAGAGTGAAGGGTGGAG
GTCACACCTCGCAGATCTACGCCATCCGTCAGAGTATTGCCAAGGCTCTTGTTGCCTTCTACCAGAAGTACGTGGATGAGCAGAGCAAGAAGGAGATTAAAGACATTCTG
AGTACTAGGGAAGCATCGGGGAAAGGCGTTAGTCGGCTCCCCAAGTGGCTGTTGATTGACTTGGACAAGTTCTGGATCTTGTCTGGCATTGCTTATTGGTCTGAACTCCA
CCATACTCGATGGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCTCCGATCGAATCGGTGCAATGTTTCGGACGCAAGAAGACGGCGGTGGCCGTCACCTACTGCAAACGCGGCAGGGGTTTGATTAAGATCAACGGCTGTCCAAT
CGAGCTTGTTGAGCCAGAGATCTTGCGCTTCAAGGCCTACGAGCCAATCCTCCTCCTTGGACGTCACCGTTTCTCTGGTGTCGATATGCGCATCAGAGTGAAGGGTGGAG
GTCACACCTCGCAGATCTACGCCATCCGTCAGAGTATTGCCAAGGCTCTTGTTGCCTTCTACCAGAAGTACGTGGATGAGCAGAGCAAGAAGGAGATTAAAGACATTCTG
AGTACTAGGGAAGCATCGGGGAAAGGCGTTAGTCGGCTCCCCAAGTGGCTGTTGATTGACTTGGACAAGTTCTGGATCTTGTCTGGCATTGCTTATTGGTCTGAACTCCA
CCATACTCGATGGAATTGA
Protein sequenceShow/hide protein sequence
MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDIL
STREASGKGVSRLPKWLLIDLDKFWILSGIAYWSELHHTRWN