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Csor.00g024320 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g024320
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Descriptionclassical arabinogalactan protein 9-like
Genome locationCsor_Chr04:4366750..4367283
RNA-Seq ExpressionCsor.00g024320
SyntenyCsor.00g024320
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053440.1 classical arabinogalactan protein 9 [Cucumis melo var. makuwa]3.70e-4569.61Show/hide
Query:  MKMGIQFLMVLACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPPPATPPPATTPPPATPPPATPPPATPPPATPPSATPPSQPPATPPTSP---A
        MKMG QF+M LA  ATS MAQAPGAAPAQPP+TPAVPPPSTPPPAASPPPATPPPAT      PPPATPPPATPPPA+ P ++PPSQPPA+PPTSP   +
Subjt:  MKMGIQFLMVLACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPPPATPPPATTPPPATPPPATPPPATPPPATPPSATPPSQPPATPPTSP---A

Query:  PTSSPTPPPKEGPASSPSPSPSPSPSTASPPSPPTEGNVPSGAPGPNAPPPP-EDNGAVSISRVAMVGSAVSGVLLAMVFA
        P+S PT PPKEGP S P         T+SPPSPP EGNVP+ +PGP+ PPPP E NGA S+SR  MVG AV+G  LAM+FA
Subjt:  PTSSPTPPPKEGPASSPSPSPSPSPSTASPPSPPTEGNVPSGAPGPNAPPPP-EDNGAVSISRVAMVGSAVSGVLLAMVFA

KAG6600667.1 hypothetical protein SDJN03_05900, partial [Cucurbita argyrosperma subsp. sororia]8.38e-87100Show/hide
Query:  MKMGIQFLMVLACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPPPATPPPATTPPPATPPPATPPPATPPPATPPSATPPSQPPATPPTSPAPTS
        MKMGIQFLMVLACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPPPATPPPATTPPPATPPPATPPPATPPPATPPSATPPSQPPATPPTSPAPTS
Subjt:  MKMGIQFLMVLACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPPPATPPPATTPPPATPPPATPPPATPPPATPPSATPPSQPPATPPTSPAPTS

Query:  SPTPPPKEGPASSPSPSPSPSPSTASPPSPPTEGNVPSGAPGPNAPPPPEDNGAVSISRVAMVGSAVSGVLLAMVFA
        SPTPPPKEGPASSPSPSPSPSPSTASPPSPPTEGNVPSGAPGPNAPPPPEDNGAVSISRVAMVGSAVSGVLLAMVFA
Subjt:  SPTPPPKEGPASSPSPSPSPSPSTASPPSPPTEGNVPSGAPGPNAPPPPEDNGAVSISRVAMVGSAVSGVLLAMVFA

XP_022941756.1 classical arabinogalactan protein 9-like [Cucurbita moschata]2.13e-6280.79Show/hide
Query:  MKMGIQFLMVLACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPPPATPPPATTPPPATPPPATPPPATPPPATPPSATPPSQPPATPPTSPAPTS
        MKMGIQFLM+LACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPPPATPP AT                      P ++PPSQPPATPPTSPAPTS
Subjt:  MKMGIQFLMVLACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPPPATPPPATTPPPATPPPATPPPATPPPATPPSATPPSQPPATPPTSPAPTS

Query:  SPTPPPKEGPASSPSPSPSPSPSTASPPSPPTEGNVPSGAPGPNAPPPPEDNGAVSISRVAMVGSAVSGVLLAMVFA
        SPT PPKEGPASSPSPS      TASPPSPPTEGNVPSGAPGPNAPPPPEDNGAVSISRVAMVGSAVSGVLLAMVFA
Subjt:  SPTPPPKEGPASSPSPSPSPSPSTASPPSPPTEGNVPSGAPGPNAPPPPEDNGAVSISRVAMVGSAVSGVLLAMVFA

XP_022984561.1 classical arabinogalactan protein 4-like [Cucurbita maxima]1.05e-4571.91Show/hide
Query:  MKMGIQFLMVLACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPPPATPPPATTPPPATPPPATPPPATPPPATPPSATPPSQPPATPPTSPAPTS
        MKMG QF+MVLA  ATSSMAQAPGAAPAQPPTTPAVPPPSTPPP  +P  ATPPPA TPPPATPPPA     TPPP+ PPS+ PP+QPPA+PPTSP    
Subjt:  MKMGIQFLMVLACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPPPATPPPATTPPPATPPPATPPPATPPPATPPSATPPSQPPATPPTSPAPTS

Query:  SPTPPPKEGPASSPSPSPSPSPSTASPPSPPTEGNVPSGAPGPNAPPPPE-DNGAVSISRVAMVGSAVSGVLLAMVFA
          TPPPKEGPASSP+PS      +ASPPSPP+EG VPS +PGPN+PPPP  DNGA ++SR  MVG AV+G LLAMVFA
Subjt:  SPTPPPKEGPASSPSPSPSPSPSTASPPSPPTEGNVPSGAPGPNAPPPPE-DNGAVSISRVAMVGSAVSGVLLAMVFA

XP_023545089.1 classical arabinogalactan protein 4-like [Cucurbita pepo subsp. pepo]4.72e-7693.3Show/hide
Query:  MGIQFLMVLACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPPPATPPPATTPPPATPPPATPPPATPPPATPPSATPPS----QPPATPPTSPAP
        MGIQFLM+LACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPPPATPPPA TPPPATPPPATPPPATPPPATPPSATPPS    QPPATPPTSPAP
Subjt:  MGIQFLMVLACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPPPATPPPATTPPPATPPPATPPPATPPPATPPSATPPS----QPPATPPTSPAP

Query:  TSSPTPPPKEGPASSPSPSPSPSPSTASPPSPPTEGNVPSGAPGPNAPPPPEDNGAVSISRVAMVGSAVSGVLLAMVFA
        TSSPTPPPKEGPASSPSPS      TASPPSPPTEGNVPSGAPGPNAPPPPEDNGAVSISRVAMVGSAVSGVLLAMVFA
Subjt:  TSSPTPPPKEGPASSPSPSPSPSPSTASPPSPPTEGNVPSGAPGPNAPPPPEDNGAVSISRVAMVGSAVSGVLLAMVFA

TrEMBL top hitse value%identityAlignment
A0A0A0L0L1 Uncharacterized protein1.26e-4570.17Show/hide
Query:  MKMGIQFLMVLACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPPPATPPPATTPPPATPPPATPPPATPPPATPPSATPPSQPPATPPTSP---A
        MKMG QF+M LA  ATS MAQAPGAAPAQPP+TPAVPPPSTPPPAASPPPATPPPAT      PPPATPPPATPPPA+ P ++PPSQPPA+PPTSP   +
Subjt:  MKMGIQFLMVLACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPPPATPPPATTPPPATPPPATPPPATPPPATPPSATPPSQPPATPPTSP---A

Query:  PTSSPTPPPKEGPASSPSPSPSPSPSTASPPSPPTEGNVPSGAPGPNAPPPP-EDNGAVSISRVAMVGSAVSGVLLAMVFA
        P+S PT PPKEGP S P         T+SPPSPP EGNVP+ +PGP+ PPPP E NGA S+SR  MVG AV+G  LAMVFA
Subjt:  PTSSPTPPPKEGPASSPSPSPSPSPSTASPPSPPTEGNVPSGAPGPNAPPPP-EDNGAVSISRVAMVGSAVSGVLLAMVFA

A0A5A7UE17 Classical arabinogalactan protein 91.79e-4569.61Show/hide
Query:  MKMGIQFLMVLACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPPPATPPPATTPPPATPPPATPPPATPPPATPPSATPPSQPPATPPTSP---A
        MKMG QF+M LA  ATS MAQAPGAAPAQPP+TPAVPPPSTPPPAASPPPATPPPAT      PPPATPPPATPPPA+ P ++PPSQPPA+PPTSP   +
Subjt:  MKMGIQFLMVLACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPPPATPPPATTPPPATPPPATPPPATPPPATPPSATPPSQPPATPPTSP---A

Query:  PTSSPTPPPKEGPASSPSPSPSPSPSTASPPSPPTEGNVPSGAPGPNAPPPP-EDNGAVSISRVAMVGSAVSGVLLAMVFA
        P+S PT PPKEGP S P         T+SPPSPP EGNVP+ +PGP+ PPPP E NGA S+SR  MVG AV+G  LAM+FA
Subjt:  PTSSPTPPPKEGPASSPSPSPSPSPSTASPPSPPTEGNVPSGAPGPNAPPPP-EDNGAVSISRVAMVGSAVSGVLLAMVFA

A0A5D3CV77 Vegetative cell wall protein gp11.79e-4569.61Show/hide
Query:  MKMGIQFLMVLACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPPPATPPPATTPPPATPPPATPPPATPPPATPPSATPPSQPPATPPTSP---A
        MKMG QF+M LA  ATS MAQAPGAAPAQPP+TPAVPPPSTPPPAASPPPATPPPAT      PPPATPPPATPPPA+ P ++PPSQPPA+PPTSP   +
Subjt:  MKMGIQFLMVLACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPPPATPPPATTPPPATPPPATPPPATPPPATPPSATPPSQPPATPPTSP---A

Query:  PTSSPTPPPKEGPASSPSPSPSPSPSTASPPSPPTEGNVPSGAPGPNAPPPP-EDNGAVSISRVAMVGSAVSGVLLAMVFA
        P+S PT PPKEGP S P         T+SPPSPP EGNVP+ +PGP+ PPPP E NGA S+SR  MVG AV+G  LAM+FA
Subjt:  PTSSPTPPPKEGPASSPSPSPSPSPSTASPPSPPTEGNVPSGAPGPNAPPPP-EDNGAVSISRVAMVGSAVSGVLLAMVFA

A0A6J1FLZ3 classical arabinogalactan protein 9-like1.03e-6280.79Show/hide
Query:  MKMGIQFLMVLACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPPPATPPPATTPPPATPPPATPPPATPPPATPPSATPPSQPPATPPTSPAPTS
        MKMGIQFLM+LACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPPPATPP AT                      P ++PPSQPPATPPTSPAPTS
Subjt:  MKMGIQFLMVLACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPPPATPPPATTPPPATPPPATPPPATPPPATPPSATPPSQPPATPPTSPAPTS

Query:  SPTPPPKEGPASSPSPSPSPSPSTASPPSPPTEGNVPSGAPGPNAPPPPEDNGAVSISRVAMVGSAVSGVLLAMVFA
        SPT PPKEGPASSPSPS      TASPPSPPTEGNVPSGAPGPNAPPPPEDNGAVSISRVAMVGSAVSGVLLAMVFA
Subjt:  SPTPPPKEGPASSPSPSPSPSPSTASPPSPPTEGNVPSGAPGPNAPPPPEDNGAVSISRVAMVGSAVSGVLLAMVFA

A0A6J1J5L5 classical arabinogalactan protein 4-like5.07e-4671.91Show/hide
Query:  MKMGIQFLMVLACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPPPATPPPATTPPPATPPPATPPPATPPPATPPSATPPSQPPATPPTSPAPTS
        MKMG QF+MVLA  ATSSMAQAPGAAPAQPPTTPAVPPPSTPPP  +P  ATPPPA TPPPATPPPA     TPPP+ PPS+ PP+QPPA+PPTSP    
Subjt:  MKMGIQFLMVLACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPPPATPPPATTPPPATPPPATPPPATPPPATPPSATPPSQPPATPPTSPAPTS

Query:  SPTPPPKEGPASSPSPSPSPSPSTASPPSPPTEGNVPSGAPGPNAPPPPE-DNGAVSISRVAMVGSAVSGVLLAMVFA
          TPPPKEGPASSP+PS      +ASPPSPP+EG VPS +PGPN+PPPP  DNGA ++SR  MVG AV+G LLAMVFA
Subjt:  SPTPPPKEGPASSPSPSPSPSPSTASPPSPPTEGNVPSGAPGPNAPPPPE-DNGAVSISRVAMVGSAVSGVLLAMVFA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATGGGTATTCAATTTCTGATGGTTTTGGCCTGCTTGGCTACTTCTTCTATGGCTCAGGCTCCTGGCGCTGCTCCCGCTCAGCCGCCCACCACCCCGGCTGTTCC
GCCCCCGTCTACTCCTCCTCCAGCTGCCTCCCCACCTCCCGCCACTCCTCCTCCAGCTACCACCCCACCTCCCGCCACCCCTCCTCCTGCAACCCCACCACCGGCCACCC
CACCTCCCGCCACCCCTCCTTCAGCAACCCCACCGAGCCAACCACCAGCCACACCTCCTACATCTCCAGCACCGACCTCCTCTCCAACTCCGCCACCGAAGGAGGGTCCA
GCCTCATCTCCATCTCCATCTCCATCTCCATCTCCATCCACCGCGTCTCCACCATCACCACCCACGGAAGGAAACGTCCCCTCCGGCGCGCCTGGACCCAACGCTCCACC
ACCCCCAGAAGATAATGGCGCAGTCTCCATTAGCCGGGTGGCGATGGTTGGCAGTGCTGTGAGCGGAGTTTTGTTGGCAATGGTGTTCGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGATGGGTATTCAATTTCTGATGGTTTTGGCCTGCTTGGCTACTTCTTCTATGGCTCAGGCTCCTGGCGCTGCTCCCGCTCAGCCGCCCACCACCCCGGCTGTTCC
GCCCCCGTCTACTCCTCCTCCAGCTGCCTCCCCACCTCCCGCCACTCCTCCTCCAGCTACCACCCCACCTCCCGCCACCCCTCCTCCTGCAACCCCACCACCGGCCACCC
CACCTCCCGCCACCCCTCCTTCAGCAACCCCACCGAGCCAACCACCAGCCACACCTCCTACATCTCCAGCACCGACCTCCTCTCCAACTCCGCCACCGAAGGAGGGTCCA
GCCTCATCTCCATCTCCATCTCCATCTCCATCTCCATCCACCGCGTCTCCACCATCACCACCCACGGAAGGAAACGTCCCCTCCGGCGCGCCTGGACCCAACGCTCCACC
ACCCCCAGAAGATAATGGCGCAGTCTCCATTAGCCGGGTGGCGATGGTTGGCAGTGCTGTGAGCGGAGTTTTGTTGGCAATGGTGTTCGCTTAG
Protein sequenceShow/hide protein sequence
MKMGIQFLMVLACLATSSMAQAPGAAPAQPPTTPAVPPPSTPPPAASPPPATPPPATTPPPATPPPATPPPATPPPATPPSATPPSQPPATPPTSPAPTSSPTPPPKEGP
ASSPSPSPSPSPSTASPPSPPTEGNVPSGAPGPNAPPPPEDNGAVSISRVAMVGSAVSGVLLAMVFA