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Csor.00g036720 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g036720
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionRPM1-interacting protein 4
Genome locationCsor_Chr09:5442064..5443431
RNA-Seq ExpressionCsor.00g036720
SyntenyCsor.00g036720
Gene Ontology termsNA
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022139562.1 RPM1-interacting protein 4 [Momordica charantia]3.50e-5096.1Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPKKWLCCIQSPPAES
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDA+GR GADP+KAPPKKWLCCIQSPPAES
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPKKWLCCIQSPPAES
XP_022936748.1 uncharacterized protein LOC111443250 [Cucurbita moschata]5.15e-52100Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPKKWLCCIQSPPAES
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPKKWLCCIQSPPAES
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPKKWLCCIQSPPAES
XP_022941007.1 RPM1-interacting protein 4-like [Cucurbita moschata]1.00e-4996.1Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPKKWLCCIQSPPAES
        M DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGR GA+PAKAPPKKWLCCIQSPPAES
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPKKWLCCIQSPPAES
XP_022975420.1 uncharacterized protein LOC111474733 isoform X1 [Cucurbita maxima]5.96e-48100Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPKKWLCCIQS
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPKKWLCCIQS
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPKKWLCCIQS
XP_038897827.1 protein NOI4 [Benincasa hispida]1.43e-4996.1Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPKKWLCCIQSPPAES
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDA GR  ADPAKAPPKKWLCCIQSPPAES
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPKKWLCCIQSPPAES
TrEMBL top hitse value%identityAlignment
A0A6J1CEA3 RPM1-interacting protein 41.69e-5096.1Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPKKWLCCIQSPPAES
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDA+GR GADP+KAPPKKWLCCIQSPPAES
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPKKWLCCIQSPPAES
A0A6J1FE40 uncharacterized protein LOC1114432502.49e-52100Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPKKWLCCIQSPPAES
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPKKWLCCIQSPPAES
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPKKWLCCIQSPPAES
A0A6J1FL74 RPM1-interacting protein 4-like4.86e-5096.1Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPKKWLCCIQSPPAES
        M DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGR GA+PAKAPPKKWLCCIQSPPAES
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPKKWLCCIQSPPAES
A0A6J1ID15 uncharacterized protein LOC111474733 isoform X22.49e-52100Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPKKWLCCIQSPPAES
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPKKWLCCIQSPPAES
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPKKWLCCIQSPPAES
A0A6J1J2H2 RPM1-interacting protein 4-like4.86e-5096.1Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPKKWLCCIQSPPAES
        M DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGR GA+PAKAPPKKWLCCIQSPPAES
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPKKWLCCIQSPPAES
SwissProt top hitse value%identityAlignment
O22633 Protein NOI41.2e-2773.75Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGR---SGADPAKAPPKKWLCCIQSPPAES
        M+DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  ++G     G DP+K  PKKWLCC+Q+P  +S
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGR---SGADPAKAPPKKWLCCIQSPPAES
Q8GYN5 RPM1-interacting protein 46.0e-0654.05Show/hide
Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTG
        +K   +PKFG+WD N+P+SA+G+T IFNK R+E+ +G
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTG
Arabidopsis top hitse value%identityAlignment
AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein6.5e-2468.06Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPKKWLCCIQS
        M DKGRPLPKFGEWDVNDP+SAEGFTVIFNKAR+EKK GGK DSPGK +       +  + P KKW CCI++
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPKKWLCCIQS
AT5G40645.1 RPM1-interacting protein 4 (RIN4) family protein2.1e-1459.38Show/hide
Query:  RPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPKKWLCC
        RPLPKFGEWDVNDP SAEGFTVIF KARD+KKT    ++ G+  +Q R        P KK  CC
Subjt:  RPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPKKWLCC
AT5G55850.1 RPM1-interacting protein 4 (RIN4) family protein2.7e-2268Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGR---SGADPAKAPPKKWLCCIQS
        M+DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  ++G     G DP+K  P K +  + +
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGR---SGADPAKAPPKKWLCCIQS
AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein1.8e-2168.49Show/hide
Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGR---SGADPAKAPPKKWLCCIQS
        DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  ++G     G DP+K  P K +  + +
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGR---SGADPAKAPPKKWLCCIQS
AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein5.7e-2874.36Show/hide
Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGR---SGADPAKAPPKKWLCCIQSPPAES
        DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  ++G     G DP+K  PKKWLCC+Q+P  +S
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGR---SGADPAKAPPKKWLCCIQSPPAES

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGGACAAAGGTCGGCCATTACCAAAGTTTGGTGAGTGGGATGTTAATGATCCGACATCAGCTGAGGGGTTCACCGTGATTTTTAACAAAGCTAGGGATGAGAAGAA
AACAGGCGGCAAACCTGATTCACCTGGAAAAGTTGATGCACAGGGCAGGTCTGGAGCGGATCCTGCCAAGGCACCGCCTAAGAAATGGCTTTGCTGTATCCAAAGTCCCC
CTGCTGAATCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACGGACAAAGGTCGGCCATTACCAAAGTTTGGTGAGTGGGATGTTAATGATCCGACATCAGCTGAGGGGTTCACCGTGATTTTTAACAAAGCTAGGGATGAGAAGAA
AACAGGCGGCAAACCTGATTCACCTGGAAAAGTTGATGCACAGGGCAGGTCTGGAGCGGATCCTGCCAAGGCACCGCCTAAGAAATGGCTTTGCTGTATCCAAAGTCCCC
CTGCTGAATCTTGA
Protein sequenceShow/hide protein sequence
MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPKKWLCCIQSPPAES