; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Csor.00g043280 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g043280
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionRING/U-box superfamily protein
Genome locationCsor_Chr04:10297066..10298361
RNA-Seq ExpressionCsor.00g043280
SyntenyCsor.00g043280
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601676.1 hypothetical protein SDJN03_06909, partial [Cucurbita argyrosperma subsp. sororia]1.45e-121100Show/hide
Query:  MGDLDETMSPYTSAETSERARQVDTSSGFCCEPSTCLPLPPAMSPRQLWEHELSHDSWSRRDFRQQFLELYVSSLFPCLLSFWVKSVESKLQQRMSNPTE
        MGDLDETMSPYTSAETSERARQVDTSSGFCCEPSTCLPLPPAMSPRQLWEHELSHDSWSRRDFRQQFLELYVSSLFPCLLSFWVKSVESKLQQRMSNPTE
Subjt:  MGDLDETMSPYTSAETSERARQVDTSSGFCCEPSTCLPLPPAMSPRQLWEHELSHDSWSRRDFRQQFLELYVSSLFPCLLSFWVKSVESKLQQRMSNPTE

Query:  MLETCMDMQLELQRSIKQEVSSLALNRTNGSEMRAHVHMFKMCYELVKAREKVSDVSCAYSGSDSCLLFMTN
        MLETCMDMQLELQRSIKQEVSSLALNRTNGSEMRAHVHMFKMCYELVKAREKVSDVSCAYSGSDSCLLFMTN
Subjt:  MLETCMDMQLELQRSIKQEVSSLALNRTNGSEMRAHVHMFKMCYELVKAREKVSDVSCAYSGSDSCLLFMTN

KAG6606023.1 Protein neuralized, partial [Cucurbita argyrosperma subsp. sororia]1.05e-3362.12Show/hide
Query:  GDLDETMSPYTSAETS-ERARQVDTSSGFCCEPSTCLPLPPAMSPRQLWEHELSHDSWSRRDFRQQFLELYVSSLFPCLLSFWVKSVESKLQQRMSNPTE
        GDLDE +SPYTSAE   E  RQ    +G        LPLPPAM  RQLW+HELSHDSWSRRDFRQQF      + +  +    +    S+LQQRMSN   
Subjt:  GDLDETMSPYTSAETS-ERARQVDTSSGFCCEPSTCLPLPPAMSPRQLWEHELSHDSWSRRDFRQQFLELYVSSLFPCLLSFWVKSVESKLQQRMSNPTE

Query:  MLETCMDMQLELQRSIKQEVSSLALNRTNGSE
        MLETCMDMQLELQRSIKQEVSS ALNRT+GSE
Subjt:  MLETCMDMQLELQRSIKQEVSSLALNRTNGSE

KAG7035972.1 hypothetical protein SDJN02_02772, partial [Cucurbita argyrosperma subsp. argyrosperma]4.58e-3362.12Show/hide
Query:  GDLDETMSPYTSAETS-ERARQVDTSSGFCCEPSTCLPLPPAMSPRQLWEHELSHDSWSRRDFRQQFLELYVSSLFPCLLSFWVKSVESKLQQRMSNPTE
        GDLDE +SPYTSAE   E  RQ    +G        LPLPPAM  RQLW+HELSHDSWSRRDFRQQF      + +  +    +    S+LQQRMSN   
Subjt:  GDLDETMSPYTSAETS-ERARQVDTSSGFCCEPSTCLPLPPAMSPRQLWEHELSHDSWSRRDFRQQFLELYVSSLFPCLLSFWVKSVESKLQQRMSNPTE

Query:  MLETCMDMQLELQRSIKQEVSSLALNRTNGSE
        MLETCMDMQLELQRSIKQEVSS ALNRT+GSE
Subjt:  MLETCMDMQLELQRSIKQEVSSLALNRTNGSE

XP_022957802.1 uncharacterized protein LOC111459234 [Cucurbita moschata]4.58e-3362.12Show/hide
Query:  GDLDETMSPYTSAETS-ERARQVDTSSGFCCEPSTCLPLPPAMSPRQLWEHELSHDSWSRRDFRQQFLELYVSSLFPCLLSFWVKSVESKLQQRMSNPTE
        GDLDE +SPYTSAE   E  RQ    +G        LPLPPAM  RQLW+HELSHDSWSRRDFRQQF      + +  +    +    S+LQQRMSN   
Subjt:  GDLDETMSPYTSAETS-ERARQVDTSSGFCCEPSTCLPLPPAMSPRQLWEHELSHDSWSRRDFRQQFLELYVSSLFPCLLSFWVKSVESKLQQRMSNPTE

Query:  MLETCMDMQLELQRSIKQEVSSLALNRTNGSE
        MLETCMDMQLELQRSIKQEVSS ALNRT+GSE
Subjt:  MLETCMDMQLELQRSIKQEVSSLALNRTNGSE

XP_023541427.1 uncharacterized protein LOC111801613 [Cucurbita pepo subsp. pepo]1.13e-3463.64Show/hide
Query:  GDLDETMSPYTSAETS-ERARQVDTSSGFCCEPSTCLPLPPAMSPRQLWEHELSHDSWSRRDFRQQFLELYVSSLFPCLLSFWVKSVESKLQQRMSNPTE
        GDLDE MSPYTSAE   E  RQ    +G        LPLPPAM PRQLW+HELSHDSWSRRDFRQQF      + +  +    +    S+LQQRMSN   
Subjt:  GDLDETMSPYTSAETS-ERARQVDTSSGFCCEPSTCLPLPPAMSPRQLWEHELSHDSWSRRDFRQQFLELYVSSLFPCLLSFWVKSVESKLQQRMSNPTE

Query:  MLETCMDMQLELQRSIKQEVSSLALNRTNGSE
        MLETCMDMQLELQRSIKQEVSS ALNRT+GSE
Subjt:  MLETCMDMQLELQRSIKQEVSSLALNRTNGSE

TrEMBL top hitse value%identityAlignment
A0A6J1CG48 uncharacterized protein LOC111011121 isoform X31.01e-2756.49Show/hide
Query:  DLDETMSPYTSAETS-ERARQVDTSSGFCCEPSTCLPLPPAMSPRQLWEHELSHDSWSRRDFRQQFLELYVSSLFPCLLSFWVKSVESKLQQRMSNPTEM
        DLDE + PYTSAE   E  RQ +  +      S  LPLPP +  RQLW+HELS+DSWSR DFRQQF      + +  +    +    S+LQQRMSN   M
Subjt:  DLDETMSPYTSAETS-ERARQVDTSSGFCCEPSTCLPLPPAMSPRQLWEHELSHDSWSRRDFRQQFLELYVSSLFPCLLSFWVKSVESKLQQRMSNPTEM

Query:  LETCMDMQLELQRSIKQEVSSLALNRTNGSE
        LE CMDMQLELQRSIKQEVSS ALNR  GSE
Subjt:  LETCMDMQLELQRSIKQEVSSLALNRTNGSE

A0A6J1H1A5 uncharacterized protein LOC1114592342.22e-3362.12Show/hide
Query:  GDLDETMSPYTSAETS-ERARQVDTSSGFCCEPSTCLPLPPAMSPRQLWEHELSHDSWSRRDFRQQFLELYVSSLFPCLLSFWVKSVESKLQQRMSNPTE
        GDLDE +SPYTSAE   E  RQ    +G        LPLPPAM  RQLW+HELSHDSWSRRDFRQQF      + +  +    +    S+LQQRMSN   
Subjt:  GDLDETMSPYTSAETS-ERARQVDTSSGFCCEPSTCLPLPPAMSPRQLWEHELSHDSWSRRDFRQQFLELYVSSLFPCLLSFWVKSVESKLQQRMSNPTE

Query:  MLETCMDMQLELQRSIKQEVSSLALNRTNGSE
        MLETCMDMQLELQRSIKQEVSS ALNRT+GSE
Subjt:  MLETCMDMQLELQRSIKQEVSSLALNRTNGSE

A0A6J1JDJ8 uncharacterized protein LOC1114840631.16e-2856.49Show/hide
Query:  DLDETMSPYTSAETS-ERARQVDTSSGFCCEPSTCLPLPPAMSPRQLWEHELSHDSWSRRDFRQQFLELYVSSLFPCLLSFWVKSVESKLQQRMSNPTEM
        D+DET+ PYTSAE   E  RQ +  +G     S  LP+PP +  RQLW+HELS+ SW RRDF QQF      + +  +    +    S+LQQRMSN   M
Subjt:  DLDETMSPYTSAETS-ERARQVDTSSGFCCEPSTCLPLPPAMSPRQLWEHELSHDSWSRRDFRQQFLELYVSSLFPCLLSFWVKSVESKLQQRMSNPTEM

Query:  LETCMDMQLELQRSIKQEVSSLALNRTNGSE
        LETCMDMQLELQRSIKQEVSS ALNRT GSE
Subjt:  LETCMDMQLELQRSIKQEVSSLALNRTNGSE

A0A6J1K6N1 uncharacterized protein LOC111491630 isoform X21.43e-3261.36Show/hide
Query:  GDLDETMSPYTSAETS-ERARQVDTSSGFCCEPSTCLPLPPAMSPRQLWEHELSHDSWSRRDFRQQFLELYVSSLFPCLLSFWVKSVESKLQQRMSNPTE
        GDLDE MSPYTS E   E  RQ    +G        LPLPPAM PRQLW+HELSHDSWSR DFRQQF      + +  +    +    S+LQQRMSN   
Subjt:  GDLDETMSPYTSAETS-ERARQVDTSSGFCCEPSTCLPLPPAMSPRQLWEHELSHDSWSRRDFRQQFLELYVSSLFPCLLSFWVKSVESKLQQRMSNPTE

Query:  MLETCMDMQLELQRSIKQEVSSLALNRTNGSE
        MLETCMDMQLELQRSIKQEVS  ALNRT GSE
Subjt:  MLETCMDMQLELQRSIKQEVSSLALNRTNGSE

A0A6J1KAM9 uncharacterized protein LOC111491630 isoform X11.46e-3261.36Show/hide
Query:  GDLDETMSPYTSAETS-ERARQVDTSSGFCCEPSTCLPLPPAMSPRQLWEHELSHDSWSRRDFRQQFLELYVSSLFPCLLSFWVKSVESKLQQRMSNPTE
        GDLDE MSPYTS E   E  RQ    +G        LPLPPAM PRQLW+HELSHDSWSR DFRQQF      + +  +    +    S+LQQRMSN   
Subjt:  GDLDETMSPYTSAETS-ERARQVDTSSGFCCEPSTCLPLPPAMSPRQLWEHELSHDSWSRRDFRQQFLELYVSSLFPCLLSFWVKSVESKLQQRMSNPTE

Query:  MLETCMDMQLELQRSIKQEVSSLALNRTNGSE
        MLETCMDMQLELQRSIKQEVS  ALNRT GSE
Subjt:  MLETCMDMQLELQRSIKQEVSSLALNRTNGSE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G27950.1 Ring/U-Box superfamily protein2.3e-0837.01Show/hide
Query:  ETMSPYTSAETSERARQVDTSSG---FCCEPSTCLPLPPAMSPRQ-LWEHELSHDSWSRRDFRQQFLELYVSSLFPCLLSFWVKSVESKLQQRMSNPTEM
        ET S +T     +  +Q D  SG        S  L LP  + P Q  W+H+ SH +W   D  Q  + +   S+    +         ++QQRM N   M
Subjt:  ETMSPYTSAETSERARQVDTSSG---FCCEPSTCLPLPPAMSPRQ-LWEHELSHDSWSRRDFRQQFLELYVSSLFPCLLSFWVKSVESKLQQRMSNPTEM

Query:  LETCMDMQLELQRSIKQEVSSLALNRT
        LE CM+MQLELQRSI+QEVS+ A++R+
Subjt:  LETCMDMQLELQRSIKQEVSSLALNRT

AT5G04460.1 RING/U-box superfamily protein2.8e-1444.44Show/hide
Query:  STCLPLPPAMSPRQLWEHELSHDSWSRRDFRQQFLELYVSSLFPCLLSFWVKSVESKLQQRMSNPTEMLETCMDMQLELQRSIKQEVSSLALNRTNGSE
        S  LP PPA  P+ +W  +L H SWSR    +  +E  V +         ++   ++LQQ MS    MLE CMDMQLELQRS++QEVS+ ALNR+ G +
Subjt:  STCLPLPPAMSPRQLWEHELSHDSWSRRDFRQQFLELYVSSLFPCLLSFWVKSVESKLQQRMSNPTEMLETCMDMQLELQRSIKQEVSSLALNRTNGSE

AT5G04460.2 RING/U-box superfamily protein2.8e-1444.44Show/hide
Query:  STCLPLPPAMSPRQLWEHELSHDSWSRRDFRQQFLELYVSSLFPCLLSFWVKSVESKLQQRMSNPTEMLETCMDMQLELQRSIKQEVSSLALNRTNGSE
        S  LP PPA  P+ +W  +L H SWSR    +  +E  V +         ++   ++LQQ MS    MLE CMDMQLELQRS++QEVS+ ALNR+ G +
Subjt:  STCLPLPPAMSPRQLWEHELSHDSWSRRDFRQQFLELYVSSLFPCLLSFWVKSVESKLQQRMSNPTEMLETCMDMQLELQRSIKQEVSSLALNRTNGSE

AT5G04460.3 RING/U-box superfamily protein2.8e-1444.44Show/hide
Query:  STCLPLPPAMSPRQLWEHELSHDSWSRRDFRQQFLELYVSSLFPCLLSFWVKSVESKLQQRMSNPTEMLETCMDMQLELQRSIKQEVSSLALNRTNGSE
        S  LP PPA  P+ +W  +L H SWSR    +  +E  V +         ++   ++LQQ MS    MLE CMDMQLELQRS++QEVS+ ALNR+ G +
Subjt:  STCLPLPPAMSPRQLWEHELSHDSWSRRDFRQQFLELYVSSLFPCLLSFWVKSVESKLQQRMSNPTEMLETCMDMQLELQRSIKQEVSSLALNRTNGSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGATCTAGACGAGACGATGTCCCCTTACACGTCTGCAGAAACAAGTGAAAGAGCACGACAGGTAGACACGTCAAGCGGGTTCTGTTGCGAGCCATCCACTTGCTT
GCCTCTGCCACCTGCAATGTCCCCTCGGCAACTTTGGGAACATGAATTGAGTCATGATAGTTGGTCAAGACGTGATTTCCGTCAGCAGTTTTTGGAGCTATATGTCTCAT
CATTGTTCCCTTGTTTGTTGTCTTTTTGGGTGAAATCAGTTGAATCAAAGCTGCAGCAGAGGATGAGCAACCCTACAGAGATGTTGGAGACATGCATGGACATGCAACTT
GAGCTGCAGCGCTCAATTAAGCAAGAAGTTTCTTCTTTGGCACTGAACCGAACAAATGGTTCAGAGATGCGGGCACATGTGCACATGTTCAAAATGTGCTACGAGTTGGT
CAAAGCAAGAGAAAAAGTGTCCGACGTGTCATGCGCCTATTCTGGAAGTGATTCGTGCTTACTCTTTATGACGAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGGATCTAGACGAGACGATGTCCCCTTACACGTCTGCAGAAACAAGTGAAAGAGCACGACAGGTAGACACGTCAAGCGGGTTCTGTTGCGAGCCATCCACTTGCTT
GCCTCTGCCACCTGCAATGTCCCCTCGGCAACTTTGGGAACATGAATTGAGTCATGATAGTTGGTCAAGACGTGATTTCCGTCAGCAGTTTTTGGAGCTATATGTCTCAT
CATTGTTCCCTTGTTTGTTGTCTTTTTGGGTGAAATCAGTTGAATCAAAGCTGCAGCAGAGGATGAGCAACCCTACAGAGATGTTGGAGACATGCATGGACATGCAACTT
GAGCTGCAGCGCTCAATTAAGCAAGAAGTTTCTTCTTTGGCACTGAACCGAACAAATGGTTCAGAGATGCGGGCACATGTGCACATGTTCAAAATGTGCTACGAGTTGGT
CAAAGCAAGAGAAAAAGTGTCCGACGTGTCATGCGCCTATTCTGGAAGTGATTCGTGCTTACTCTTTATGACGAATTAG
Protein sequenceShow/hide protein sequence
MGDLDETMSPYTSAETSERARQVDTSSGFCCEPSTCLPLPPAMSPRQLWEHELSHDSWSRRDFRQQFLELYVSSLFPCLLSFWVKSVESKLQQRMSNPTEMLETCMDMQL
ELQRSIKQEVSSLALNRTNGSEMRAHVHMFKMCYELVKAREKVSDVSCAYSGSDSCLLFMTN