CuGenDBv2

Gene ID	Csor.00g044200
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	chromophore lyase CRL, chloroplastic
Genome location	Csor_Chr18:1519532..1523820
RNA-Seq Expression	Csor.00g044200
Synteny	Csor.00g044200
Gene Ontology terms	GO:0000302 - response to reactive oxygen species (biological process) GO:0010020 - chloroplast fission (biological process) GO:0017009 - protein-phycocyanobilin linkage (biological process) GO:0046741 - transport of virus in host, tissue to tissue (biological process) GO:0051302 - regulation of cell division (biological process) GO:0098586 - cellular response to virus (biological process) GO:0009707 - chloroplast outer membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0016829 - lyase activity (molecular function)
InterPro domains	IPR010404 - Chromophore lyase CpcT/CpeT IPR038672 - Chromophore lyase CpcT/CpeT superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6573153.1 Chromophore lyase CRL, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

1.35e-212

100

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Query:  MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAEMVDGSTVLYFEQAF
        MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAEMVDGSTVLYFEQAF
Subjt:  MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAEMVDGSTVLYFEQAF

Query:  SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT
        SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT
Subjt:  SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT

Query:  SEIAILKNNEVHTWERGYDEDGNQAWGTKGPYEFKPAPASSLKDIRLIIVLILFKRAGRILESKQNGSPVDILPSSVSDSGNCTES
        SEIAILKNNEVHTWERGYDEDGNQAWGTKGPYEFKPAPASSLKDIRLIIVLILFKRAGRILESKQNGSPVDILPSSVSDSGNCTES
Subjt:  SEIAILKNNEVHTWERGYDEDGNQAWGTKGPYEFKPAPASSLKDIRLIIVLILFKRAGRILESKQNGSPVDILPSSVSDSGNCTES

KAG7012338.1 Chromophore lyase CRL, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.07e-182

99.18

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Query:  MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAEMVDGSTVLYFEQAF
        MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAEMVDGSTVLYFEQAF
Subjt:  MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAEMVDGSTVLYFEQAF

Query:  SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT
        SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRC YEGSTPPGGFPNSWNGAAYCT
Subjt:  SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT

Query:  SEIAILKNNEVHTWERGYDEDGNQAWGTKGPYEFKPAPASSLKDI
        SEIAILKNNEVHTWERGYDEDGNQAWGTKGPYEFKPAPASSLKD+
Subjt:  SEIAILKNNEVHTWERGYDEDGNQAWGTKGPYEFKPAPASSLKDI

XP_022954685.1 chromophore lyase CRL, chloroplastic-like isoform X2 [Cucurbita moschata]

1.46e-182

99.18

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Query:  MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAEMVDGSTVLYFEQAF
        MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAE+VDGSTVLYFEQAF
Subjt:  MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAEMVDGSTVLYFEQAF

Query:  SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT
        SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT
Subjt:  SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT

Query:  SEIAILKNNEVHTWERGYDEDGNQAWGTKGPYEFKPAPASSLKDI
        SEIAILKNNEVHTWERGYDEDGNQAWGTKGPYEFKPAPASSLKD+
Subjt:  SEIAILKNNEVHTWERGYDEDGNQAWGTKGPYEFKPAPASSLKDI

XP_022994448.1 chromophore lyase CRL, chloroplastic [Cucurbita maxima]

2.07e-182

99.18

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Query:  MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAEMVDGSTVLYFEQAF
        MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAEMVDGSTVLYFEQAF
Subjt:  MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAEMVDGSTVLYFEQAF

Query:  SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT
        SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT
Subjt:  SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT

Query:  SEIAILKNNEVHTWERGYDEDGNQAWGTKGPYEFKPAPASSLKDI
        SEIAILKNNEVHTWERGYDEDGNQ WGTKGPYEFKPAPASSLKD+
Subjt:  SEIAILKNNEVHTWERGYDEDGNQAWGTKGPYEFKPAPASSLKDI

XP_023542740.1 chromophore lyase CRL, chloroplastic-like [Cucurbita pepo subsp. pepo]

5.08e-183

99.59

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Query:  MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAEMVDGSTVLYFEQAF
        MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAEMVDGSTVLYFEQAF
Subjt:  MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAEMVDGSTVLYFEQAF

Query:  SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT
        SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT
Subjt:  SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT

Query:  SEIAILKNNEVHTWERGYDEDGNQAWGTKGPYEFKPAPASSLKDI
        SEIAILKNNEVHTWERGYDEDGNQAWGTKGPYEFKPAPASSLKD+
Subjt:  SEIAILKNNEVHTWERGYDEDGNQAWGTKGPYEFKPAPASSLKDI

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B0Z6 chromophore lyase CRL, chloroplastic

6.80e-167

94.17

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Query:  SSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAEMVDGSTVLYFEQAFSRTPQK
        +S+D NNSVGWNRAGGLIMKTLVLVGGAL LKRLTKSTTRWDHAR VSQSLSGEKFSKEQAARDP+NYFNIRM TCPAAEMVDGSTVLYFEQAFSRTPQK
Subjt:  SSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAEMVDGSTVLYFEQAFSRTPQK

Query:  PFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCTSEIAIL
        PFRQRFYTVK CSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLK CDRGKRCLYEGSTPPGGFPNSWNGA+YCTSEIAIL
Subjt:  PFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCTSEIAIL

Query:  KNNEVHTWERGYDEDGNQAWGTK-GPYEFKPAPASSLKDI
        KNNEVHTWERGYDEDGNQ WGTK GPYEFKP PASSLKD+
Subjt:  KNNEVHTWERGYDEDGNQAWGTK-GPYEFKPAPASSLKDI

A0A6J1C7M9 chromophore lyase CRL, chloroplastic

5.39e-169

92.68

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Query:  MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAEMVDGSTVLYFEQAF
        MG +SNS++D N+SVGWNRAGGLIMKTLVLVGGAL LKRLTKSTTRWDHAR VSQSLSGEKFSKEQA+RDP+NYFNIRMTTCPAAEMVDGSTVLYFEQAF
Subjt:  MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAEMVDGSTVLYFEQAF

Query:  SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT
        SRTPQKPFRQRFYTVK CSKEMKCDVELSSYAIR+MEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLK CDRGKRCLYEGSTPPGGFPNSWNGAAYCT
Subjt:  SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT

Query:  SEIAILKNNEVHTWERGYDEDGNQAWGTK-GPYEFKPAPASSLKDI
        SEIAILKNNEVHTWERGYD+DGNQ WGTK GPYEFKP PASSLKD+
Subjt:  SEIAILKNNEVHTWERGYDEDGNQAWGTK-GPYEFKPAPASSLKDI

A0A6J1GRS8 chromophore lyase CRL, chloroplastic-like isoform X1

2.32e-180

97.2

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Query:  MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAEMVDGSTVLYFEQAF
        MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAE+VDGSTVLYFEQAF
Subjt:  MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAEMVDGSTVLYFEQAF

Query:  SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVG-----DIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNG
        SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVG     DIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNG
Subjt:  SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVG-----DIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNG

Query:  AAYCTSEIAILKNNEVHTWERGYDEDGNQAWGTKGPYEFKPAPASSLKDI
        AAYCTSEIAILKNNEVHTWERGYDEDGNQAWGTKGPYEFKPAPASSLKD+
Subjt:  AAYCTSEIAILKNNEVHTWERGYDEDGNQAWGTKGPYEFKPAPASSLKDI

A0A6J1GT34 chromophore lyase CRL, chloroplastic-like isoform X2

7.05e-183

99.18

Show/hide

Query:  MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAEMVDGSTVLYFEQAF
        MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAE+VDGSTVLYFEQAF
Subjt:  MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAEMVDGSTVLYFEQAF

Query:  SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT
        SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT
Subjt:  SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT

Query:  SEIAILKNNEVHTWERGYDEDGNQAWGTKGPYEFKPAPASSLKDI
        SEIAILKNNEVHTWERGYDEDGNQAWGTKGPYEFKPAPASSLKD+
Subjt:  SEIAILKNNEVHTWERGYDEDGNQAWGTKGPYEFKPAPASSLKDI

A0A6J1K575 chromophore lyase CRL, chloroplastic

1.00e-182

99.18

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Query:  MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAEMVDGSTVLYFEQAF
        MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAEMVDGSTVLYFEQAF
Subjt:  MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAEMVDGSTVLYFEQAF

Query:  SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT
        SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT
Subjt:  SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT

Query:  SEIAILKNNEVHTWERGYDEDGNQAWGTKGPYEFKPAPASSLKDI
        SEIAILKNNEVHTWERGYDEDGNQ WGTKGPYEFKPAPASSLKD+
Subjt:  SEIAILKNNEVHTWERGYDEDGNQAWGTKGPYEFKPAPASSLKDI

SwissProt top hits

e value

%identity

Alignment

Q7NNH3 Chromophore lyase CpcT/CpeT 1

2.7e-11

30.6

Show/hide

Query:  LSGEKFSKEQAARDPENYFNIRMTTCPAAEMVDGSTVLYF--EQAFSRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPL-P
        L+G   + +QA  D     ++RMTTC      D S  +Y   EQ  S     P+RQR   +++ +      VE + +   E +     C +   +R + P
Subjt:  LSGEKFSKEQAARDPENYFNIRMTTCPAAEMVDGSTVLYF--EQAFSRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPL-P

Query:  EEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCTSEIAILKNNEVHTWERGYDEDGNQAWGTK-GPYEFK
          + GD      T  ++    G +  Y G+TP GG  ++  GAA  T+EI + K   + T +RG+D  GNQ WG K  PY F+
Subjt:  EEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCTSEIAILKNNEVHTWERGYDEDGNQAWGTK-GPYEFK

Q9FI46 Chromophore lyase CRL, chloroplastic

1.7e-109

74.69

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Query:  MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAEMVDGSTVLYFEQAF
        MG +S  SD  ++S GW+RA GL++KTLVL+GGAL +KRLTKSTTR DHAR VS+SL+GEKF++EQA+RDP+NYFNIRM +CPAAEMVDGS VLY EQAF
Subjt:  MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAEMVDGSTVLYFEQAF

Query:  SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT
         RTPQKPFRQR Y VK C KE+KCDVE+SSYAIR+ EEYKNFCDR KDQRPLPEE++GDI EHLTT+HL CCDRGKRCLYEGST PGGFPNSWNGA+YCT
Subjt:  SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT

Query:  SEIAILKNNEVHTWERGYDEDGNQAWGTK-GPYEFKPAPASSLKD
        S++A+LKNNE+H W+RG+DE+ NQ WG K GPYEFKPA +SS+ +
Subjt:  SEIAILKNNEVHTWERGYDEDGNQAWGTK-GPYEFKPAPASSLKD

Arabidopsis top hits

e value

%identity

Alignment

AT5G51020.1 crumpled leaf

1.2e-110

74.69

Show/hide

Query:  MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAEMVDGSTVLYFEQAF
        MG +S  SD  ++S GW+RA GL++KTLVL+GGAL +KRLTKSTTR DHAR VS+SL+GEKF++EQA+RDP+NYFNIRM +CPAAEMVDGS VLY EQAF
Subjt:  MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAEMVDGSTVLYFEQAF

Query:  SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT
         RTPQKPFRQR Y VK C KE+KCDVE+SSYAIR+ EEYKNFCDR KDQRPLPEE++GDI EHLTT+HL CCDRGKRCLYEGST PGGFPNSWNGA+YCT
Subjt:  SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT

Query:  SEIAILKNNEVHTWERGYDEDGNQAWGTK-GPYEFKPAPASSLKD
        S++A+LKNNE+H W+RG+DE+ NQ WG K GPYEFKPA +SS+ +
Subjt:  SEIAILKNNEVHTWERGYDEDGNQAWGTK-GPYEFKPAPASSLKD

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGGTGCCGATTCGAATTCTAGCGATGATTATAACAACTCAGTTGGATGGAACAGAGCTGGGGGTTTGATTATGAAGACTTTGGTACTGGTCGGAGGCGCCCTTTTCCT
CAAACGTCTTACTAAGTCCACGACGCGATGGGATCATGCCCGCTCCGTTTCTCAGTCTCTTTCCGGCGAGAAGTTTTCGAAGGAGCAAGCGGCTAGGGATCCTGAAAATT
ACTTCAACATCAGAATGACTACGTGCCCTGCAGCAGAAATGGTTGATGGTTCTACGGTGTTGTACTTCGAACAAGCTTTCTCCAGAACTCCTCAAAAACCATTTCGCCAG
AGATTTTATACGGTGAAACTTTGTTCAAAGGAGATGAAATGTGATGTGGAGCTAAGCTCATACGCCATTCGAGAAATGGAGGAGTACAAGAATTTTTGTGATCGCACAAA
AGACCAACGTCCTCTTCCCGAAGAAATAGTTGGGGACATTGCGGAGCATTTAACTACGCTACATCTCAAGTGTTGTGACCGTGGAAAACGTTGCCTCTACGAAGGTTCAA
CTCCACCTGGTGGTTTTCCAAATTCATGGAATGGAGCAGCCTACTGTACTTCAGAAATTGCTATCCTAAAGAATAATGAAGTACATACCTGGGAAAGGGGTTATGACGAA
GATGGAAACCAGGCTTGGGGAACAAAAGGACCTTACGAATTCAAGCCAGCCCCAGCCTCCAGTCTCAAGGACATTCGCCTAATAATTGTTCTTATCTTGTTCAAAAGAGC
CGGTCGAATTCTTGAAAGCAAGCAAAATGGCTCTCCAGTGGACATACTACCAAGCTCAGTTTCAGACTCAGGAAACTGCACGGAATCATAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAEMVDGSTVLYFEQAFSRTPQKPFRQ
RFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCTSEIAILKNNEVHTWERGYDE
DGNQAWGTKGPYEFKPAPASSLKDIRLIIVLILFKRAGRILESKQNGSPVDILPSSVSDSGNCTES

Csor.00g044200 (gene) of Silver-seed gourd (wild; sororia) v1 genome