; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Csor.00g044210 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g044210
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Descriptioncentromere protein S isoform X2
Genome locationCsor_Chr18:1516319..1518164
RNA-Seq ExpressionCsor.00g044210
SyntenyCsor.00g044210
Gene Ontology termsGO:0000712 - resolution of meiotic recombination intermediates (biological process)
GO:0006312 - mitotic recombination (biological process)
GO:0007129 - synapsis (biological process)
GO:0031297 - replication fork processing (biological process)
GO:0036297 - interstrand cross-link repair (biological process)
GO:0043240 - Fanconi anaemia nuclear complex (cellular component)
GO:0071821 - FANCM-MHF complex (cellular component)
GO:0003682 - chromatin binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR009072 - Histone-fold
IPR029003 - CENP-S/Mhf1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573152.1 Protein MHF1-like protein, partial [Cucurbita argyrosperma subsp. sororia]4.28e-81100Show/hide
Query:  METGMEEDDSTAELLRDRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSVHRNEHLAASLSSFCHELK
        METGMEEDDSTAELLRDRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSVHRNEHLAASLSSFCHELK
Subjt:  METGMEEDDSTAELLRDRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSVHRNEHLAASLSSFCHELK

Query:  TKEPQSERKRKKAPKKEDKSAIHITDA
        TKEPQSERKRKKAPKKEDKSAIHITDA
Subjt:  TKEPQSERKRKKAPKKEDKSAIHITDA

KAG7012337.1 Protein MHF1-like protein [Cucurbita argyrosperma subsp. argyrosperma]1.01e-7998.43Show/hide
Query:  METGMEEDDSTAELLRDRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSVHRNEHLAASLSSFCHELK
        METGMEEDDSTAELLRDRFRLSAI IAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILS HRNEHLAASLSSFCHELK
Subjt:  METGMEEDDSTAELLRDRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSVHRNEHLAASLSSFCHELK

Query:  TKEPQSERKRKKAPKKEDKSAIHITDA
        TKEPQSERKRKKAPKKEDKSAIHITDA
Subjt:  TKEPQSERKRKKAPKKEDKSAIHITDA

XP_004154006.1 protein MHF1 homolog isoform X2 [Cucumis sativus]2.32e-6582.17Show/hide
Query:  METGMEEDDSTAELLRDRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSVHRNEHLAASLSSFCHELK
        METGMEEDDS +ELLRDRFRLS+ISIAEAEA +SGMEIS PVMTCVA+LAFKYTKQLAKDLELFA H GRKSVNTEDVIL+ HRNEHLAA L+S C++LK
Subjt:  METGMEEDDSTAELLRDRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSVHRNEHLAASLSSFCHELK

Query:  TKEPQSERKRKKAPKKEDKS--AIHITDA
        TKEPQSERKRKKAPKK+D+   A+HI DA
Subjt:  TKEPQSERKRKKAPKKEDKS--AIHITDA

XP_022955266.1 protein MHF1 homolog [Cucurbita moschata]2.04e-7998.43Show/hide
Query:  METGMEEDDSTAELLRDRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSVHRNEHLAASLSSFCHELK
        METGMEEDDSTAELLR RFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILS HRNEHLAASLSSFCHELK
Subjt:  METGMEEDDSTAELLRDRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSVHRNEHLAASLSSFCHELK

Query:  TKEPQSERKRKKAPKKEDKSAIHITDA
        TKEPQSERKRKKAPKKEDKSAIHITDA
Subjt:  TKEPQSERKRKKAPKKEDKSAIHITDA

XP_022994496.1 protein MHF1 homolog [Cucurbita maxima]1.74e-8099.21Show/hide
Query:  METGMEEDDSTAELLRDRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSVHRNEHLAASLSSFCHELK
        METGMEEDDSTAELLRDRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILS HRNEHLAASLSSFCHELK
Subjt:  METGMEEDDSTAELLRDRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSVHRNEHLAASLSSFCHELK

Query:  TKEPQSERKRKKAPKKEDKSAIHITDA
        TKEPQSERKRKKAPKKEDKSAIHITDA
Subjt:  TKEPQSERKRKKAPKKEDKSAIHITDA

TrEMBL top hitse value%identityAlignment
A0A0A0LR97 Uncharacterized protein1.12e-6582.17Show/hide
Query:  METGMEEDDSTAELLRDRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSVHRNEHLAASLSSFCHELK
        METGMEEDDS +ELLRDRFRLS+ISIAEAEA +SGMEIS PVMTCVA+LAFKYTKQLAKDLELFA H GRKSVNTEDVIL+ HRNEHLAA L+S C++LK
Subjt:  METGMEEDDSTAELLRDRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSVHRNEHLAASLSSFCHELK

Query:  TKEPQSERKRKKAPKKEDKS--AIHITDA
        TKEPQSERKRKKAPKK+D+   A+HI DA
Subjt:  TKEPQSERKRKKAPKKEDKS--AIHITDA

A0A1S3B173 centromere protein S isoform X22.53e-6279.07Show/hide
Query:  METGMEEDDSTAELLRDRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSVHRNEHLAASLSSFCHELK
        MET MEEDDS +ELLRDRFRLS ISIAEAEA +SGMEIS PVMTCVA+LAFK+TKQLAKDLELFA H GRKSVNTEDVIL+ HRNEHLAA L+S C++LK
Subjt:  METGMEEDDSTAELLRDRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSVHRNEHLAASLSSFCHELK

Query:  TKEPQSERKRKKAPKKEDKS--AIHITDA
         KEPQSERKRKKAPKK+D+   A+HI +A
Subjt:  TKEPQSERKRKKAPKKEDKS--AIHITDA

A0A5D3BHQ8 Centromere protein S isoform X22.53e-6279.07Show/hide
Query:  METGMEEDDSTAELLRDRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSVHRNEHLAASLSSFCHELK
        MET MEEDDS +ELLRDRFRLS ISIAEAEA +SGMEIS PVMTCVA+LAFK+TKQLAKDLELFA H GRKSVNTEDVIL+ HRNEHLAA L+S C++LK
Subjt:  METGMEEDDSTAELLRDRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSVHRNEHLAASLSSFCHELK

Query:  TKEPQSERKRKKAPKKEDKS--AIHITDA
         KEPQSERKRKKAPKK+D+   A+HI +A
Subjt:  TKEPQSERKRKKAPKKEDKS--AIHITDA

A0A6J1GTB4 protein MHF1 homolog9.87e-8098.43Show/hide
Query:  METGMEEDDSTAELLRDRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSVHRNEHLAASLSSFCHELK
        METGMEEDDSTAELLR RFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILS HRNEHLAASLSSFCHELK
Subjt:  METGMEEDDSTAELLRDRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSVHRNEHLAASLSSFCHELK

Query:  TKEPQSERKRKKAPKKEDKSAIHITDA
        TKEPQSERKRKKAPKKEDKSAIHITDA
Subjt:  TKEPQSERKRKKAPKKEDKSAIHITDA

A0A6J1JZB0 protein MHF1 homolog8.44e-8199.21Show/hide
Query:  METGMEEDDSTAELLRDRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSVHRNEHLAASLSSFCHELK
        METGMEEDDSTAELLRDRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILS HRNEHLAASLSSFCHELK
Subjt:  METGMEEDDSTAELLRDRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSVHRNEHLAASLSSFCHELK

Query:  TKEPQSERKRKKAPKKEDKSAIHITDA
        TKEPQSERKRKKAPKKEDKSAIHITDA
Subjt:  TKEPQSERKRKKAPKKEDKSAIHITDA

SwissProt top hitse value%identityAlignment
O74807 Inner kinetochore subunit mhf12.2e-0533.03Show/hide
Query:  MEEDDSTAELL---RDRFRLSAISIAEAEAKRSGMEISVPVMTC--VAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSVHRNEHLAASLSSFCHE-
        MEE+   AE+    ++    +A  + E+E++     + V  + C  V E+ ++  + LAKD+E FA H GRK+V  +DV+L   RNE L   +++F  E 
Subjt:  MEEDDSTAELL---RDRFRLSAISIAEAEAKRSGMEISVPVMTC--VAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSVHRNEHLAASLSSFCHE-

Query:  LKTKEPQSE
        +K+K+ + E
Subjt:  LKTKEPQSE

Q2TBR7 Centromere protein S2.9e-0527.48Show/hide
Query:  MEEDDSTAELLRDRF--RLSAI------SIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSVHRNEHLAASLSSFC
        MEE++ + E  R  +  RL A        + E  A    M+ S   +  ++E+ F   +  AKDLE+FA H  R ++NTEDV L   R+  L   ++   
Subjt:  MEEDDSTAELLRDRF--RLSAI------SIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSVHRNEHLAASLSSFC

Query:  HELKTKEPQSERKRKKAPKKEDKSAIHITDA
         ++     + + K+KK  + E+++++   +A
Subjt:  HELKTKEPQSERKRKKAPKKEDKSAIHITDA

Q6NRI8 Centromere protein S2.0e-0628.57Show/hide
Query:  METGMEEDDSTAELLRDRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSVHRNEHLAASLSSFCHELK
        M  G EE  S  + L+        S+ +  A    ++ S   +  ++E+ F+  +  AKDLE+FA H  R ++N +DV L   R+  L A +S    E+ 
Subjt:  METGMEEDDSTAELLRDRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSVHRNEHLAASLSSFCHELK

Query:  TKEPQSERKRKK
            + + K+KK
Subjt:  TKEPQSERKRKK

Q8N2Z9 Centromere protein S9.9e-0633.87Show/hide
Query:  MEEDDSTAELLRDRF--RLSAI------SIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSVHRNEHLAASLSSFC
        MEE+  T E  R  +  RL A        + E  A    M+ S   +  ++EL F+  +  AKDLE+FA H  R ++NTEDV L   R+  L   ++   
Subjt:  MEEDDSTAELLRDRF--RLSAI------SIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSVHRNEHLAASLSSFC

Query:  HELKTKEPQSERKRKKAPKKEDKS
         E+   +   ERK +K  K ED S
Subjt:  HELKTKEPQSERKRKKAPKKEDKS

Q9FI55 Protein MHF1 homolog4.9e-3770.69Show/hide
Query:  EDDSTAELLRDRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSVHRNEHLAASLSSFCHELKTKEPQS
        E+ S  +L+RDRFRLSAISIAEAEAK++GMEI  PV+ CVA+LAFKY + +AKDLELFAHH GRK VN +DV+LS HRN++LAASL S C+ELK KEPQS
Subjt:  EDDSTAELLRDRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSVHRNEHLAASLSSFCHELKTKEPQS

Query:  ERKRKK-APKKEDKSA
        ERKRKK + KKEDK++
Subjt:  ERKRKK-APKKEDKSA

Arabidopsis top hitse value%identityAlignment
AT5G50930.1 Histone superfamily protein3.5e-3870.69Show/hide
Query:  EDDSTAELLRDRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSVHRNEHLAASLSSFCHELKTKEPQS
        E+ S  +L+RDRFRLSAISIAEAEAK++GMEI  PV+ CVA+LAFKY + +AKDLELFAHH GRK VN +DV+LS HRN++LAASL S C+ELK KEPQS
Subjt:  EDDSTAELLRDRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSVHRNEHLAASLSSFCHELKTKEPQS

Query:  ERKRKK-APKKEDKSA
        ERKRKK + KKEDK++
Subjt:  ERKRKK-APKKEDKSA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGACTGGGATGGAAGAAGACGACTCCACGGCCGAACTCTTGAGGGACCGATTCCGACTGTCCGCCATTTCTATCGCTGAAGCTGAAGCGAAGAGAAGCGGGATGGA
AATCTCTGTACCGGTGATGACTTGTGTCGCTGAGTTAGCGTTCAAATATACAAAACAGTTGGCAAAGGACCTTGAGTTATTTGCTCATCATGGTGGTCGGAAATCTGTGA
ATACGGAAGACGTCATACTCTCAGTTCATAGAAACGAGCATCTGGCTGCCTCATTGTCGTCCTTCTGCCATGAACTAAAGACAAAAGAACCTCAAAGTGAGAGAAAGCGG
AAAAAGGCACCGAAAAAGGAAGATAAAAGTGCAATACATATTACTGACGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGACTGGGATGGAAGAAGACGACTCCACGGCCGAACTCTTGAGGGACCGATTCCGACTGTCCGCCATTTCTATCGCTGAAGCTGAAGCGAAGAGAAGCGGGATGGA
AATCTCTGTACCGGTGATGACTTGTGTCGCTGAGTTAGCGTTCAAATATACAAAACAGTTGGCAAAGGACCTTGAGTTATTTGCTCATCATGGTGGTCGGAAATCTGTGA
ATACGGAAGACGTCATACTCTCAGTTCATAGAAACGAGCATCTGGCTGCCTCATTGTCGTCCTTCTGCCATGAACTAAAGACAAAAGAACCTCAAAGTGAGAGAAAGCGG
AAAAAGGCACCGAAAAAGGAAGATAAAAGTGCAATACATATTACTGACGCATAA
Protein sequenceShow/hide protein sequence
METGMEEDDSTAELLRDRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSVHRNEHLAASLSSFCHELKTKEPQSERKR
KKAPKKEDKSAIHITDA