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Csor.00g044320 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g044320
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionDUF4408 domain-containing protein
Genome locationCsor_Chr18:1439042..1439560
RNA-Seq ExpressionCsor.00g044320
SyntenyCsor.00g044320
Gene Ontology termsGO:0008643 - carbohydrate transport (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573141.1 hypothetical protein SDJN03_27028, partial [Cucurbita argyrosperma subsp. sororia]1.28e-115100Show/hide
Query:  MEALSSKIPLTMALTNIKTRSSMITNILCFLVALFFILLLFLPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDFFADNLCFYDGTLIVGGDE
        MEALSSKIPLTMALTNIKTRSSMITNILCFLVALFFILLLFLPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDFFADNLCFYDGTLIVGGDE
Subjt:  MEALSSKIPLTMALTNIKTRSSMITNILCFLVALFFILLLFLPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDFFADNLCFYDGTLIVGGDE

Query:  NRGLKICHDDDEWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKKALKCLTNRVNG
        NRGLKICHDDDEWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKKALKCLTNRVNG
Subjt:  NRGLKICHDDDEWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKKALKCLTNRVNG

KAG7012326.1 hypothetical protein SDJN02_25078, partial [Cucurbita argyrosperma subsp. argyrosperma]1.82e-108100Show/hide
Query:  MALTNIKTRSSMITNILCFLVALFFILLLFLPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDFFADNLCFYDGTLIVGGDENRGLKICHDDD
        MALTNIKTRSSMITNILCFLVALFFILLLFLPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDFFADNLCFYDGTLIVGGDENRGLKICHDDD
Subjt:  MALTNIKTRSSMITNILCFLVALFFILLLFLPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDFFADNLCFYDGTLIVGGDENRGLKICHDDD

Query:  EWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKKALKCLTNRVNG
        EWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKKALKCLTNRVNG
Subjt:  EWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKKALKCLTNRVNG

KGN64433.2 hypothetical protein Csa_013667 [Cucumis sativus]5.09e-3256.29Show/hide
Query:  MALTNIKTRSS----------MITNIL---CFLVALFFIL---LLFLPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDFFADNLCFYDG---
        M LT I+T SS          +I NIL   CFL AL +IL    LF P SNY INFPTP  VFI+GNLIVV+LIGESKVF+S + D F  ++CFYDG   
Subjt:  MALTNIKTRSS----------MITNIL---CFLVALFFIL---LLFLPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDFFADNLCFYDG---

Query:  -TLIVGGDENRGLKICHDDDEWEMGLENCEDLSKRADDFIARVNMQREIEA
         TL+  GD  R  +   ++DEWE+   N E+LSKRADDFIARVNMQR+IEA
Subjt:  -TLIVGGDENRGLKICHDDDEWEMGLENCEDLSKRADDFIARVNMQREIEA

XP_008446247.1 PREDICTED: uncharacterized protein LOC103489033 [Cucumis melo]5.42e-3848.54Show/hide
Query:  TNIKTRSSMITNILC--FLVALFFILLLFLPLS------------------NYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDFFADNLCFYDG--
        +N    +++I NIL   FL ALF  LL  +PL                   NY INFPTP  VFI+GNLIVV+LIGESK+F+S + D F  ++CFY G  
Subjt:  TNIKTRSSMITNILC--FLVALFFILLLFLPLS------------------NYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDFFADNLCFYDG--

Query:  --TLIVGGDENRGLKICHDDDEWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKK
          T +  GD+ R  +   ++DEWE+   N E+LSKRADDFIARVNMQR+IEA ++ +CC++ TTK +YRKK
Subjt:  --TLIVGGDENRGLKICHDDDEWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKK

XP_011660360.1 uncharacterized protein LOC105436383 [Cucumis sativus]1.55e-4154.12Show/hide
Query:  MALTNIKTRSS----------MITNIL---CFLVALFFIL---LLFLPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDFFADNLCFYDG---
        M LT I+T SS          +I NIL   CFL AL +IL    LF P SNY INFPTP  VFI+GNLIVV+LIGESKVF+S + D F  ++CFYDG   
Subjt:  MALTNIKTRSS----------MITNIL---CFLVALFFIL---LLFLPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDFFADNLCFYDG---

Query:  -TLIVGGDENRGLKICHDDDEWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKK
         TL+  GD  R  +   ++DEWE+   N E+LSKRADDFIARVNMQR+IEA ++ +CC++ T K +Y KK
Subjt:  -TLIVGGDENRGLKICHDDDEWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKK

TrEMBL top hitse value%identityAlignment
A0A0A0LWQ9 Uncharacterized protein7.51e-4254.12Show/hide
Query:  MALTNIKTRSS----------MITNIL---CFLVALFFIL---LLFLPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDFFADNLCFYDG---
        M LT I+T SS          +I NIL   CFL AL +IL    LF P SNY INFPTP  VFI+GNLIVV+LIGESKVF+S + D F  ++CFYDG   
Subjt:  MALTNIKTRSS----------MITNIL---CFLVALFFIL---LLFLPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDFFADNLCFYDG---

Query:  -TLIVGGDENRGLKICHDDDEWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKK
         TL+  GD  R  +   ++DEWE+   N E+LSKRADDFIARVNMQR+IEA ++ +CC++ T K +Y KK
Subjt:  -TLIVGGDENRGLKICHDDDEWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKK

A0A1S3BFF3 uncharacterized protein LOC1034890332.62e-3848.54Show/hide
Query:  TNIKTRSSMITNILC--FLVALFFILLLFLPLS------------------NYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDFFADNLCFYDG--
        +N    +++I NIL   FL ALF  LL  +PL                   NY INFPTP  VFI+GNLIVV+LIGESK+F+S + D F  ++CFY G  
Subjt:  TNIKTRSSMITNILC--FLVALFFILLLFLPLS------------------NYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDFFADNLCFYDG--

Query:  --TLIVGGDENRGLKICHDDDEWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKK
          T +  GD+ R  +   ++DEWE+   N E+LSKRADDFIARVNMQR+IEA ++ +CC++ TTK +YRKK
Subjt:  --TLIVGGDENRGLKICHDDDEWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKK

A0A5A7UM42 Protoheme IX farnesyltransferase2.62e-3848.54Show/hide
Query:  TNIKTRSSMITNILC--FLVALFFILLLFLPLS------------------NYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDFFADNLCFYDG--
        +N    +++I NIL   FL ALF  LL  +PL                   NY INFPTP  VFI+GNLIVV+LIGESK+F+S + D F  ++CFY G  
Subjt:  TNIKTRSSMITNILC--FLVALFFILLLFLPLS------------------NYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDFFADNLCFYDG--

Query:  --TLIVGGDENRGLKICHDDDEWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKK
          T +  GD+ R  +   ++DEWE+   N E+LSKRADDFIARVNMQR+IEA ++ +CC++ TTK +YRKK
Subjt:  --TLIVGGDENRGLKICHDDDEWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKK

A0A6J1CA01 uncharacterized protein LOC1110088103.97e-2445.83Show/hide
Query:  NIKTRSSMITNILCFLVAL-----FFILLLFLPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDFFADNL--CFYDGTL---IVG---GDENR
        NI   + + + +L FL AL     FFI    LP    S N PT  SVF++GNLIV VL+GESK+F+ K+ D   D+   C +DG+     +G    D + 
Subjt:  NIKTRSSMITNILCFLVAL-----FFILLLFLPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDFFADNL--CFYDGTL---IVG---GDENR

Query:  GLKICHDDDEWEMG-LENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKKALKCLTNR
        G +I    DEWEM  L + E+LS+RADDFIARVNMQR+IEA+IL + CE  T   KYR++ + CL  R
Subjt:  GLKICHDDDEWEMG-LENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKKALKCLTNR

V4TA27 DUF4408 domain-containing protein1.75e-1237.06Show/hide
Query:  LFLPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSS--------DFFADNL----------CFYDGTLIVGGD--ENRGLKICHDDDEWEMGLEN
        LF+ L    +   +P  +F +GNLI+++LIGESK FAS+SS        D+ + +           C  +     G D  EN  ++   D++E E+G EN
Subjt:  LFLPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSS--------DFFADNL----------CFYDGTLIVGGD--ENRGLKICHDDDEWEMGLEN

Query:  ------------CEDLSKRADDFIARVNMQREIEASILCFCCE
                     E+LSKRADDFIARVN QR +EA +L  C E
Subjt:  ------------CEDLSKRADDFIARVNMQREIEASILCFCCE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCTTTAAGCTCCAAAATCCCATTAACAATGGCTCTTACAAACATCAAAACAAGATCTTCAATGATTACAAACATCCTCTGTTTTCTTGTTGCTCTGTTTTTCAT
CCTCTTATTGTTCCTTCCATTATCCAATTACTCAATAAATTTCCCAACACCCATTTCCGTTTTCATCATCGGCAATCTGATCGTTGTCGTTCTCATTGGAGAATCCAAAG
TTTTTGCTTCAAAAAGTTCGGATTTTTTTGCTGATAATCTCTGTTTTTACGATGGAACATTGATTGTCGGAGGAGATGAAAACAGGGGTTTGAAGATTTGTCATGATGAT
GATGAATGGGAGATGGGTTTGGAGAATTGTGAGGATTTGAGTAAAAGAGCCGATGATTTCATTGCTAGAGTGAATATGCAGAGAGAAATTGAAGCTTCGATACTCTGTTT
TTGTTGTGAATTGAAGACGACGAAGAACAAATATAGAAAGAAAGCTTTGAAATGTTTGACGAATCGTGTCAATGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCTTTAAGCTCCAAAATCCCATTAACAATGGCTCTTACAAACATCAAAACAAGATCTTCAATGATTACAAACATCCTCTGTTTTCTTGTTGCTCTGTTTTTCAT
CCTCTTATTGTTCCTTCCATTATCCAATTACTCAATAAATTTCCCAACACCCATTTCCGTTTTCATCATCGGCAATCTGATCGTTGTCGTTCTCATTGGAGAATCCAAAG
TTTTTGCTTCAAAAAGTTCGGATTTTTTTGCTGATAATCTCTGTTTTTACGATGGAACATTGATTGTCGGAGGAGATGAAAACAGGGGTTTGAAGATTTGTCATGATGAT
GATGAATGGGAGATGGGTTTGGAGAATTGTGAGGATTTGAGTAAAAGAGCCGATGATTTCATTGCTAGAGTGAATATGCAGAGAGAAATTGAAGCTTCGATACTCTGTTT
TTGTTGTGAATTGAAGACGACGAAGAACAAATATAGAAAGAAAGCTTTGAAATGTTTGACGAATCGTGTCAATGGCTGA
Protein sequenceShow/hide protein sequence
MEALSSKIPLTMALTNIKTRSSMITNILCFLVALFFILLLFLPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDFFADNLCFYDGTLIVGGDENRGLKICHDD
DEWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKKALKCLTNRVNG