; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Csor.00g044390 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g044390
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionProtein transport protein Sec61 subunit gamma
Genome locationCsor_Chr18:1393042..1395407
RNA-Seq ExpressionCsor.00g044390
SyntenyCsor.00g044390
Gene Ontology termsGO:0031204 - posttranslational protein targeting to membrane, translocation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0071261 - Ssh1 translocon complex (cellular component)
GO:0008320 - protein transmembrane transporter activity (molecular function)
InterPro domainsIPR001901 - Protein translocase complex, SecE/Sec61-gamma subunit
IPR008158 - Protein translocase SEC61 complex, gamma subunit
IPR023391 - Protein translocase SecE domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573134.1 Protein transport protein Sec61 subunit gamma, partial [Cucurbita argyrosperma subsp. sororia]3.18e-39100Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFIRSYDEVRRVMVAGGHV
        MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFIRSYDEVRRVMVAGGHV
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFIRSYDEVRRVMVAGGHV
KAG6584155.1 Protein transport protein Sec61 subunit gamma, partial [Cucurbita argyrosperma subsp. sororia]1.38e-2789.83Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFIR-SYDEVRR
        MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGF+   +DEVR+
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFIR-SYDEVRR
RWR75919.1 protein transport protein Sec61 subunit gamma [Cinnamomum micranthum f. kanehirae]1.61e-2698Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFI
        MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGF+
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFI
XP_008439824.1 PREDICTED: protein transport protein Sec61 subunit gamma [Cucumis melo]1.61e-2698Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFI
        MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGF+
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFI
XP_020681682.1 protein transport protein Sec61 subunit gamma-1 [Dendrobium catenatum]1.61e-2698Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFI
        MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGF+
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFI
TrEMBL top hitse value%identityAlignment
A0A2I0BCE0 Protein transport protein Sec61 subunit gamma-27.79e-2798Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFI
        MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGF+
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFI
A0A3S3PYH4 Protein transport protein Sec61 subunit gamma7.79e-2798Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFI
        MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGF+
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFI
A0A5D3BJ11 Protein transport protein Sec61 subunit gamma7.79e-2798Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFI
        MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGF+
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFI
A0A6J1GT74 protein transport protein Sec61 subunit gamma7.79e-2798Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFI
        MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGF+
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFI
A0A6J1JW08 protein transport protein Sec61 subunit gamma7.79e-2798Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFI
        MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGF+
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFI
SwissProt top hitse value%identityAlignment
P0DI74 Protein transport protein Sec61 subunit gamma-11.6e-2092Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFI
        MDA+DSVVDPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGF+
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFI
P0DI75 Protein transport protein Sec61 subunit gamma-21.6e-2092Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFI
        MDA+DSVVDPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGF+
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFI
P38385 Protein transport protein Sec61 subunit gamma1.3e-2096Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFI
        MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVA RTAIGFVVMGF+
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFI
Q7Z1B8 Protein transport protein Sec61 subunit gamma1.9e-1370Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFI
        MD V   ++P R+FAKDS+RLVKRC KPDRKEF K+AV TAIGF +MGFI
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFI
Q9SMP2 Protein transport protein Sec61 subunit gamma-32.0e-1884Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFI
        M+A+DS +DPLR+FAK SVRLV+RCHKPDRKEFTKVAVRTAIGFVVMGF+
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFI
Arabidopsis top hitse value%identityAlignment
AT3G48570.1 secE/sec61-gamma protein transport protein1.4e-1984Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFI
        M+A+DS +DPLR+FAK SVRLV+RCHKPDRKEFTKVAVRTAIGFVVMGF+
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFI
AT4G24920.1 secE/sec61-gamma protein transport protein1.2e-2192Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFI
        MDA+DSVVDPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGF+
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFI
AT5G50460.1 secE/sec61-gamma protein transport protein1.2e-2192Show/hide
Query:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFI
        MDA+DSVVDPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGF+
Subjt:  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCCGTAGATTCTGTCGTTGATCCTCTCAGAGAGTTCGCCAAGGACAGCGTTCGTCTCGTTAAGAGATGTCATAAACCCGATCGGAAAGAATTCACTAAGGTTGC
CGTCCGTACCGCTATCGGTTTCGTTGTGATGGGATTCATTAGGTCATATGATGAAGTACGTAGGGTGATGGTAGCTGGCGGTCACGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGCCGTAGATTCTGTCGTTGATCCTCTCAGAGAGTTCGCCAAGGACAGCGTTCGTCTCGTTAAGAGATGTCATAAACCCGATCGGAAAGAATTCACTAAGGTTGC
CGTCCGTACCGCTATCGGTTTCGTTGTGATGGGATTCATTAGGTCATATGATGAAGTACGTAGGGTGATGGTAGCTGGCGGTCACGTTTAG
Protein sequenceShow/hide protein sequence
MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFIRSYDEVRRVMVAGGHV