; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Csor.00g045330 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g045330
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Descriptionsnakin-2-like
Genome locationCsor_Chr18:830946..832324
RNA-Seq ExpressionCsor.00g045330
SyntenyCsor.00g045330
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573040.1 hypothetical protein SDJN03_26927, partial [Cucurbita argyrosperma subsp. sororia]8.39e-53100Show/hide
Query:  MAARFLLLLGVLAFLCLSPASFLHGAPVGFDGNPGGGGGGGMVRRPNERVMTKIAAMWGAFEAEPVLEGVRDVLLALQLRAAGDFR
        MAARFLLLLGVLAFLCLSPASFLHGAPVGFDGNPGGGGGGGMVRRPNERVMTKIAAMWGAFEAEPVLEGVRDVLLALQLRAAGDFR
Subjt:  MAARFLLLLGVLAFLCLSPASFLHGAPVGFDGNPGGGGGGGMVRRPNERVMTKIAAMWGAFEAEPVLEGVRDVLLALQLRAAGDFR

KAG7012229.1 Snakin-2, partial [Cucurbita argyrosperma subsp. argyrosperma]2.68e-2287.93Show/hide
Query:  MAARFLLLLGVLAFLCLSPASFLHGAPVGFDGNPGGGGGGGMVRRPNERVMTKIAAMW
        MAARFLLL GVLAFLCLSPASFLHGAPVGFDGNPGGGGG  MVRRPNERVM KI   W
Subjt:  MAARFLLLLGVLAFLCLSPASFLHGAPVGFDGNPGGGGGGGMVRRPNERVMTKIAAMW

XP_022954950.1 snakin-2-like [Cucurbita moschata]1.54e-2491.53Show/hide
Query:  MAARFLLLLGVLAFLCLSPASFLHGAPVGFDGNP-GGGGGGGMVRRPNERVMTKIAAMW
        MAARFLLL GVLAFLCLSPASFLHGAPVGFDGNP GGGGGGGMVRRPNERVMTKI   W
Subjt:  MAARFLLLLGVLAFLCLSPASFLHGAPVGFDGNP-GGGGGGGMVRRPNERVMTKIAAMW

XP_022994681.1 snakin-2-like [Cucurbita maxima]4.51e-2488.14Show/hide
Query:  MAARFLLLLGVLAFLCLSPASFLHGAPVGFDGNPGGGGGGG-MVRRPNERVMTKIAAMW
        MAARFLLLLGVLAFLCLSPASFLHG  VGFDGNPGGGGGGG  VRRPNERVMTKI   W
Subjt:  MAARFLLLLGVLAFLCLSPASFLHGAPVGFDGNPGGGGGGG-MVRRPNERVMTKIAAMW

XP_023542413.1 snakin-2-like [Cucurbita pepo subsp. pepo]3.91e-2286.21Show/hide
Query:  MAARFLLLLGVLAFLCLSPASFLHGAPVGFDGNPGGGGGGGMVRRPNERVMTKIAAMW
        MAARFLLLLGVLAFLCLSPAS LHGA VGFDGNPGGGGG   VRRPNERVMTKI   W
Subjt:  MAARFLLLLGVLAFLCLSPASFLHGAPVGFDGNPGGGGGGGMVRRPNERVMTKIAAMW

TrEMBL top hitse value%identityAlignment
A0A6J1GTU1 snakin-2-like7.43e-2591.53Show/hide
Query:  MAARFLLLLGVLAFLCLSPASFLHGAPVGFDGNP-GGGGGGGMVRRPNERVMTKIAAMW
        MAARFLLL GVLAFLCLSPASFLHGAPVGFDGNP GGGGGGGMVRRPNERVMTKI   W
Subjt:  MAARFLLLLGVLAFLCLSPASFLHGAPVGFDGNP-GGGGGGGMVRRPNERVMTKIAAMW

A0A6J1JZU9 snakin-2-like2.18e-2488.14Show/hide
Query:  MAARFLLLLGVLAFLCLSPASFLHGAPVGFDGNPGGGGGGG-MVRRPNERVMTKIAAMW
        MAARFLLLLGVLAFLCLSPASFLHG  VGFDGNPGGGGGGG  VRRPNERVMTKI   W
Subjt:  MAARFLLLLGVLAFLCLSPASFLHGAPVGFDGNPGGGGGGG-MVRRPNERVMTKIAAMW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCTCGTTTCCTTCTTCTTCTTGGAGTTCTTGCCTTCCTTTGCCTTTCACCGGCAAGCTTTCTTCATGGTGCGCCGGTGGGCTTCGATGGAAACCCCGGAGGAGG
AGGAGGAGGAGGGATGGTGAGGAGGCCAAACGAGAGGGTGATGACGAAAATAGCGGCGATGTGGGGCGCATTCGAGGCCGAACCGGTGCTTGAGGGTGTGCGGGACGTGC
TGCTTGCGCTGCAACTGCGTGCCGCCGGGGACTTCAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCTCGTTTCCTTCTTCTTCTTGGAGTTCTTGCCTTCCTTTGCCTTTCACCGGCAAGCTTTCTTCATGGTGCGCCGGTGGGCTTCGATGGAAACCCCGGAGGAGG
AGGAGGAGGAGGGATGGTGAGGAGGCCAAACGAGAGGGTGATGACGAAAATAGCGGCGATGTGGGGCGCATTCGAGGCCGAACCGGTGCTTGAGGGTGTGCGGGACGTGC
TGCTTGCGCTGCAACTGCGTGCCGCCGGGGACTTCAGGTAA
Protein sequenceShow/hide protein sequence
MAARFLLLLGVLAFLCLSPASFLHGAPVGFDGNPGGGGGGGMVRRPNERVMTKIAAMWGAFEAEPVLEGVRDVLLALQLRAAGDFR