; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Csor.00g046460 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g046460
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Descriptionpeptidyl-tRNA hydrolase, chloroplastic
Genome locationCsor_Chr18:166564..167435
RNA-Seq ExpressionCsor.00g046460
SyntenyCsor.00g046460
Gene Ontology termsGO:0004045 - aminoacyl-tRNA hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572895.1 Peptidyl-tRNA hydrolase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.55e-79100Show/hide
Query:  MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSLSLNPPSLHIFSSMTSSITASMSTSSPLAPDLLALEENKPAPPPKPWLIVGLGNPGKKYERTRHSVR
        MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSLSLNPPSLHIFSSMTSSITASMSTSSPLAPDLLALEENKPAPPPKPWLIVGLGNPGKKYERTRHSVR
Subjt:  MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSLSLNPPSLHIFSSMTSSITASMSTSSPLAPDLLALEENKPAPPPKPWLIVGLGNPGKKYERTRHSVR

Query:  FEMVDAVAVVEGISMSSASFKALIG
        FEMVDAVAVVEGISMSSASFKALIG
Subjt:  FEMVDAVAVVEGISMSSASFKALIG

KAG6572896.1 Peptidyl-tRNA hydrolase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.19e-7799.2Show/hide
Query:  MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSLSLNPPSLHIFSSMTSSITASMSTSSPLAPDLLALEENKPAPPPKPWLIVGLGNPGKKYERTRHSVR
        MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSLSLNP SLHIFSSMTSSITASMSTSSPLAPDLLALEENKPAPPPKPWLIVGLGNPGKKYERTRHSVR
Subjt:  MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSLSLNPPSLHIFSSMTSSITASMSTSSPLAPDLLALEENKPAPPPKPWLIVGLGNPGKKYERTRHSVR

Query:  FEMVDAVAVVEGISMSSASFKALIG
        FEMVDAVAVVEGISMSSASFKALIG
Subjt:  FEMVDAVAVVEGISMSSASFKALIG

KAG6572934.1 Peptidyl-tRNA hydrolase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.25e-7497.6Show/hide
Query:  MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSLSLNPPSLHIFSSMTSSITASMSTSSPLAPDLLALEENKPAPPPKPWLIVGLGNPGKKYERTRHSVR
        MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSLSLNPPSLHIFSSMTSSITASMSTSSPLAPDLLALEENKPAPPPKPWLIVGLGNPGKKYERTRH+V 
Subjt:  MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSLSLNPPSLHIFSSMTSSITASMSTSSPLAPDLLALEENKPAPPPKPWLIVGLGNPGKKYERTRHSVR

Query:  FEMVDAVAVVEGISMSSASFKALIG
        FEMVDAVA VEGISMSSASFKALIG
Subjt:  FEMVDAVAVVEGISMSSASFKALIG

XP_022954859.1 peptidyl-tRNA hydrolase, chloroplastic-like isoform X2 [Cucurbita moschata]4.35e-7596.8Show/hide
Query:  MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSLSLNPPSLHIFSSMTSSITASMSTSSPLAPDLLALEENKPAPPPKPWLIVGLGNPGKKYERTRHSVR
        MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSLSLNPPSLHIFSSMTSS TASMSTSSPLAPDLLA+EENKPAPPPKPWLIVGLGNPGKKYERTRH+V 
Subjt:  MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSLSLNPPSLHIFSSMTSSITASMSTSSPLAPDLLALEENKPAPPPKPWLIVGLGNPGKKYERTRHSVR

Query:  FEMVDAVAVVEGISMSSASFKALIG
        FEMVDAVAVVEGISMSSASFKALIG
Subjt:  FEMVDAVAVVEGISMSSASFKALIG

XP_022955054.1 peptidyl-tRNA hydrolase, chloroplastic-like isoform X1 [Cucurbita moschata]1.69e-7798.4Show/hide
Query:  MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSLSLNPPSLHIFSSMTSSITASMSTSSPLAPDLLALEENKPAPPPKPWLIVGLGNPGKKYERTRHSVR
        MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSLSLNPPSLHIFSSMTSSITASMSTSSPLAPDLLALEENKPAPPPKPWLIVGLGNPGKKYERTRHSV 
Subjt:  MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSLSLNPPSLHIFSSMTSSITASMSTSSPLAPDLLALEENKPAPPPKPWLIVGLGNPGKKYERTRHSVR

Query:  FEMVDAVAVVEGISMSSASFKALIG
        FEMVDAVAVVEGISMSS SFKALIG
Subjt:  FEMVDAVAVVEGISMSSASFKALIG

TrEMBL top hitse value%identityAlignment
A0A6J1GS97 peptidyl-tRNA hydrolase, chloroplastic-like isoform X18.60e-7596.8Show/hide
Query:  MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSLSLNPPSLHIFSSMTSSITASMSTSSPLAPDLLALEENKPAPPPKPWLIVGLGNPGKKYERTRHSVR
        MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSLSLNPPSLHIFSSMTSS TASMSTSSPLAPDLLA+EENKPAPPPKPWLIVGLGNPGKKYERTRH+V 
Subjt:  MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSLSLNPPSLHIFSSMTSSITASMSTSSPLAPDLLALEENKPAPPPKPWLIVGLGNPGKKYERTRHSVR

Query:  FEMVDAVAVVEGISMSSASFKALIG
        FEMVDAVAVVEGISMSSASFKALIG
Subjt:  FEMVDAVAVVEGISMSSASFKALIG

A0A6J1GTK7 peptidyl-tRNA hydrolase, chloroplastic-like isoform X22.11e-7596.8Show/hide
Query:  MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSLSLNPPSLHIFSSMTSSITASMSTSSPLAPDLLALEENKPAPPPKPWLIVGLGNPGKKYERTRHSVR
        MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSLSLNPPSLHIFSSMTSS TASMSTSSPLAPDLLA+EENKPAPPPKPWLIVGLGNPGKKYERTRH+V 
Subjt:  MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSLSLNPPSLHIFSSMTSSITASMSTSSPLAPDLLALEENKPAPPPKPWLIVGLGNPGKKYERTRHSVR

Query:  FEMVDAVAVVEGISMSSASFKALIG
        FEMVDAVAVVEGISMSSASFKALIG
Subjt:  FEMVDAVAVVEGISMSSASFKALIG

A0A6J1GUU4 peptidyl-tRNA hydrolase, chloroplastic-like isoform X18.18e-7898.4Show/hide
Query:  MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSLSLNPPSLHIFSSMTSSITASMSTSSPLAPDLLALEENKPAPPPKPWLIVGLGNPGKKYERTRHSVR
        MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSLSLNPPSLHIFSSMTSSITASMSTSSPLAPDLLALEENKPAPPPKPWLIVGLGNPGKKYERTRHSV 
Subjt:  MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSLSLNPPSLHIFSSMTSSITASMSTSSPLAPDLLALEENKPAPPPKPWLIVGLGNPGKKYERTRHSVR

Query:  FEMVDAVAVVEGISMSSASFKALIG
        FEMVDAVAVVEGISMSS SFKALIG
Subjt:  FEMVDAVAVVEGISMSSASFKALIG

A0A6J1JZW9 peptidyl-tRNA hydrolase, chloroplastic-like isoform X17.41e-7392.8Show/hide
Query:  MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSLSLNPPSLHIFSSMTSSITASMSTSSPLAPDLLALEENKPAPPPKPWLIVGLGNPGKKYERTRHSVR
        MNIAASLSSLAALRLP+CLHCF TFRTPISFPSLSLNPPSLHIFSSMTSSITASMSTSSPLAPD LA+EE KPAPPPKPWLIVGLGNPGKKYERTRH+V 
Subjt:  MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSLSLNPPSLHIFSSMTSSITASMSTSSPLAPDLLALEENKPAPPPKPWLIVGLGNPGKKYERTRHSVR

Query:  FEMVDAVAVVEGISMSSASFKALIG
        FEM+DAVA VEGISMSSASFKALIG
Subjt:  FEMVDAVAVVEGISMSSASFKALIG

A0A6J1K317 peptidyl-tRNA hydrolase, chloroplastic isoform X34.42e-7292.8Show/hide
Query:  MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSLSLNPPSLHIFSSMTSSITASMSTSSPLAPDLLALEENKPAPPPKPWLIVGLGNPGKKYERTRHSVR
        MNIAASLSSLAALRLP+CLHCF TFRTPISFPSLSLNPPSLHIFSSMTSSITASMSTSSPLAPD LA+EE KPAPPPKPWLIVGLGNPGKKYERTRH+V 
Subjt:  MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSLSLNPPSLHIFSSMTSSITASMSTSSPLAPDLLALEENKPAPPPKPWLIVGLGNPGKKYERTRHSVR

Query:  FEMVDAVAVVEGISMSSASFKALIG
        FEM+DAVA VEGISMSSASFKALIG
Subjt:  FEMVDAVAVVEGISMSSASFKALIG

SwissProt top hitse value%identityAlignment
Q10LI6 CRS2-like protein, chloroplastic1.5e-0959.57Show/hide
Query:  PWLIVGLGNPGKKYERTRHSVRFEMVDAVAVVEGISMSSASFKALIG
        PWL VGLGNPG+KY+ TRH+V F+M+D  A  +GIS++   FKAL G
Subjt:  PWLIVGLGNPGKKYERTRHSVRFEMVDAVAVVEGISMSSASFKALIG

Q5N9Q7 Peptidyl-tRNA hydrolase, mitochondrial1.1e-1266.67Show/hide
Query:  KPWLIVGLGNPGKKYERTRHSVRFEMVDAVAVVEGISMSSASFKALIG
        KPWL VGLGNPGK Y+ TRH+V FEM+D +A  EGIS+SS  FKA++G
Subjt:  KPWLIVGLGNPGKKYERTRHSVRFEMVDAVAVVEGISMSSASFKALIG

Q5ZCL8 Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic8.5e-1061.7Show/hide
Query:  PWLIVGLGNPGKKYERTRHSVRFEMVDAVAVVEGISMSSASFKALIG
        PWLI GLGNPG KY  TRH+V FEMVD +A  EGI+M++   K+L+G
Subjt:  PWLIVGLGNPGKKYERTRHSVRFEMVDAVAVVEGISMSSASFKALIG

Q8GW64 Peptidyl-tRNA hydrolase, chloroplastic6.1e-1656.63Show/hide
Query:  SSMTSSITASMSTSSPLAPDLLALEENKPAPPP--KPWLIVGLGNPGKKYERTRHSVRFEMVDAVAVVEGISMSSASFKALIG
        SS + S +++  +S P +  L AL  +KP  PP   PWLIVGLGNPGKKY+ TRH+V FEMVDA+A  EGISM++ +FKAL G
Subjt:  SSMTSSITASMSTSSPLAPDLLALEENKPAPPP--KPWLIVGLGNPGKKYERTRHSVRFEMVDAVAVVEGISMSSASFKALIG

Q9LF14 Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic2.9e-1063.83Show/hide
Query:  PWLIVGLGNPGKKYERTRHSVRFEMVDAVAVVEGISMSSASFKALIG
        PWLIVGLGNPG KY  TRH+V FEM+D +A  EG+ M++   KALIG
Subjt:  PWLIVGLGNPGKKYERTRHSVRFEMVDAVAVVEGISMSSASFKALIG

Arabidopsis top hitse value%identityAlignment
AT1G18440.1 Peptidyl-tRNA hydrolase family protein4.3e-1756.63Show/hide
Query:  SSMTSSITASMSTSSPLAPDLLALEENKPAPPP--KPWLIVGLGNPGKKYERTRHSVRFEMVDAVAVVEGISMSSASFKALIG
        SS + S +++  +S P +  L AL  +KP  PP   PWLIVGLGNPGKKY+ TRH+V FEMVDA+A  EGISM++ +FKAL G
Subjt:  SSMTSSITASMSTSSPLAPDLLALEENKPAPPP--KPWLIVGLGNPGKKYERTRHSVRFEMVDAVAVVEGISMSSASFKALIG

AT5G16140.1 Peptidyl-tRNA hydrolase family protein2.1e-1163.83Show/hide
Query:  PWLIVGLGNPGKKYERTRHSVRFEMVDAVAVVEGISMSSASFKALIG
        PWLIVGLGNPG KY  TRH+V FEM+D +A  EG+ M++   KALIG
Subjt:  PWLIVGLGNPGKKYERTRHSVRFEMVDAVAVVEGISMSSASFKALIG

AT5G16140.2 Peptidyl-tRNA hydrolase family protein2.1e-1163.83Show/hide
Query:  PWLIVGLGNPGKKYERTRHSVRFEMVDAVAVVEGISMSSASFKALIG
        PWLIVGLGNPG KY  TRH+V FEM+D +A  EG+ M++   KALIG
Subjt:  PWLIVGLGNPGKKYERTRHSVRFEMVDAVAVVEGISMSSASFKALIG

AT5G19830.1 Peptidyl-tRNA hydrolase family protein2.3e-1054.17Show/hide
Query:  KPWLIVGLGNPGKKYERTRHSVRFEMVDAVAVVEGISMSSASFKALIG
        +PWL +GLGNPG KY+ TRH++ FEM+D  A   GI M+  +FKA++G
Subjt:  KPWLIVGLGNPGKKYERTRHSVRFEMVDAVAVVEGISMSSASFKALIG

AT5G38290.2 Peptidyl-tRNA hydrolase family protein3.3e-0940.82Show/hide
Query:  SFPSLSLNPPSLHIFSSMTSSIT--ASMSTSSPLAPDLLALEENKPAPPPKPWLIVGLGNPGKKYERTRHSVRFEMVDAVAVVEGISMSSASFKALIG
        S P  S   P  + FS   S+    +S+  S P++ + L   E        PWLIVGLGNPG KY  TRH++ FEM+D +A    ISM++   KAL+G
Subjt:  SFPSLSLNPPSLHIFSSMTSSIT--ASMSTSSPLAPDLLALEENKPAPPPKPWLIVGLGNPGKKYERTRHSVRFEMVDAVAVVEGISMSSASFKALIG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATATTGCTGCTTCTCTATCTTCACTCGCCGCCCTGCGCCTTCCTGTTTGTCTCCATTGTTTCCGAACCTTCAGAACACCCATTTCCTTCCCTTCTCTATCC
TTAAATCCCCCAAGTTTGCATATCTTTTCGTCGATGACTTCTTCCATTACTGCGTCCATGTCCACTTCCTCACCTCTGGCCCCCGATCTGCTCGCTTTGGAGGAG
AACAAGCCCGCGCCGCCGCCCAAGCCATGGCTGATCGTTGGCCTTGGGAATCCCGGGAAGAAGTATGAACGCACGCGCCACAGTGTCCGCTTTGAGATGGTGGAT
GCTGTTGCTGTGGTTGAAGGGATATCCATGAGTAGTGCTTCCTTCAAAGCTCTGATCGGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATATTGCTGCTTCTCTATCTTCACTCGCCGCCCTGCGCCTTCCTGTTTGTCTCCATTGTTTCCGAACCTTCAGAACACCCATTTCCTTCCCTTCTCTATCC
TTAAATCCCCCAAGTTTGCATATCTTTTCGTCGATGACTTCTTCCATTACTGCGTCCATGTCCACTTCCTCACCTCTGGCCCCCGATCTGCTCGCTTTGGAGGAG
AACAAGCCCGCGCCGCCGCCCAAGCCATGGCTGATCGTTGGCCTTGGGAATCCCGGGAAGAAGTATGAACGCACGCGCCACAGTGTCCGCTTTGAGATGGTGGAT
GCTGTTGCTGTGGTTGAAGGGATATCCATGAGTAGTGCTTCCTTCAAAGCTCTGATCGGGTAA
Protein sequenceShow/hide protein sequence
MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSLSLNPPSLHIFSSMTSSITASMSTSSPLAPDLLALEENKPAPPPKPWLIVGLGNPGKKYERTRHSVRFEMVD
AVAVVEGISMSSASFKALIG