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Csor.00g051380 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g051380
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionPhytosulfokine-beta
Genome locationCsor_Chr12:3312117..3312517
RNA-Seq ExpressionCsor.00g051380
SyntenyCsor.00g051380
Gene Ontology termsGO:0008283 - cell population proliferation (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016020 - membrane (cellular component)
GO:0008083 - growth factor activity (molecular function)
InterPro domainsIPR009438 - Phytosulfokine


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585713.1 Phytosulfokines 3, partial [Cucurbita argyrosperma subsp. sororia]5.45e-2260.71Show/hide
Query:  MSKLVALFSVVALVTMSLLSSS-EARPIATS-TATSLDLNHIAHQVVSEKGHDDVCEGGETKECLAKRTVEAHTDYIYTDDTKS
        MSKLVA+F++ AL+TMS+LSSS EARPI T+ TAT LD++ I HQ    KG +DVC+GGE + CL + T+EAH+DYIYTD   S
Subjt:  MSKLVALFSVVALVTMSLLSSS-EARPIATS-TATSLDLNHIAHQVVSEKGHDDVCEGGETKECLAKRTVEAHTDYIYTDDTKS

KAG6585714.1 Phytosulfokine, partial [Cucurbita argyrosperma subsp. sororia]3.39e-48100Show/hide
Query:  MSKLVALFSVVALVTMSLLSSSEARPIATSTATSLDLNHIAHQVVSEKGHDDVCEGGETKECLAKRTVEAHTDYIYTDDTKS
        MSKLVALFSVVALVTMSLLSSSEARPIATSTATSLDLNHIAHQVVSEKGHDDVCEGGETKECLAKRTVEAHTDYIYTDDTKS
Subjt:  MSKLVALFSVVALVTMSLLSSSEARPIATSTATSLDLNHIAHQVVSEKGHDDVCEGGETKECLAKRTVEAHTDYIYTDDTKS

XP_022131649.1 uncharacterized protein LOC111004777 [Momordica charantia]1.49e-1353.01Show/hide
Query:  MSK-LVALFSVVALVTMSLLSSSEARPIATSTATSLDLNHIAHQVVSEKGHDDVC-EGGETKECLAKRTVEAHTDYIYTDDTK
        MSK L ALF++ AL+TMS+L SS+ARPI T +A S++   IAH    ++ H+D C E  E ++CL +RT+EAHTDYIY+ +TK
Subjt:  MSK-LVALFSVVALVTMSLLSSSEARPIATSTATSLDLNHIAHQVVSEKGHDDVC-EGGETKECLAKRTVEAHTDYIYTDDTK

XP_023538273.1 phytosulfokines-like [Cucurbita pepo subsp. pepo]8.70e-4289.02Show/hide
Query:  MSKLVALFSVVALVTMSLLSSSEARPIATSTATSLDLNHIAHQVVSEKGHDDVCEGGETKECLAKRTVEAHTDYIYTDDTKS
        MSKLV+LFS+VALVTMSLLS SEARPIATSTAT LDLNHIAHQVVSEK HDDVCEGGET ECLA+ T EAHTDYIYTDDTKS
Subjt:  MSKLVALFSVVALVTMSLLSSSEARPIATSTATSLDLNHIAHQVVSEKGHDDVCEGGETKECLAKRTVEAHTDYIYTDDTKS

XP_023546620.1 phytosulfokines-like [Cucurbita pepo subsp. pepo]1.04e-1659.76Show/hide
Query:  MSKLVALFSVVALVTMSLLSSSEARPIATSTATSLDLNHIAHQVVSEKGHDD-VCEGGETKECLAKRTVEAHTDYIYTDDTK
        MSKL ALF++ AL+TMS    SEARPIAT TATS     IA+ VV+E+   D  CEG E  +CL +RT+EAHTDYIY+ DTK
Subjt:  MSKLVALFSVVALVTMSLLSSSEARPIATSTATSLDLNHIAHQVVSEKGHDD-VCEGGETKECLAKRTVEAHTDYIYTDDTK

TrEMBL top hitse value%identityAlignment
A0A118JW21 Phytosulfokine-beta4.30e-0840.28Show/hide
Query:  VALVTMSLLSSSEARPIAT-STATSLDLNHIAHQVVSEKGHDDVCEGGETKECLAKRTVEAHTDYIYTDDTK
        +A++ +S+LS + ARPI T +  T ++ +H   +V   K  +  C G   +ECL +RT+ AH DYIYT +TK
Subjt:  VALVTMSLLSSSEARPIAT-STATSLDLNHIAHQVVSEKGHDDVCEGGETKECLAKRTVEAHTDYIYTDDTK

A0A2U1NSB2 Phytosulfokine-beta5.72e-0842.17Show/hide
Query:  MSKLVALFSVVALVTMSLLSSSEARPIAT----STATSLDLNHIAHQVVSEKGHDDVCEGGETKECLAKRTVEAHTDYIYTDD
        MSK + LF +VAL+  S LS  +ARPI T    +T+       I  +  ++   D+ CEG   +ECL +RT+ AH DYIYT D
Subjt:  MSKLVALFSVVALVTMSLLSSSEARPIAT----STATSLDLNHIAHQVVSEKGHDDVCEGGETKECLAKRTVEAHTDYIYTDD

A0A5P1EI39 Phytosulfokine-alpha3.49e-0741.98Show/hide
Query:  MSKLVALFSVVALVTMSLLSSSEARPIATSTATSLDLNHIAHQVVSEKGHDDVCEGGETKECLAKRTVEAHTDYIYTDDTK
        M K ++L  +  L+++SL  S  ARP+    A S   +H  H++V     D+ CEG E ++CL +RT+ AHTDYIYT D K
Subjt:  MSKLVALFSVVALVTMSLLSSSEARPIATSTATSLDLNHIAHQVVSEKGHDDVCEGGETKECLAKRTVEAHTDYIYTDDTK

A0A6J1BQV2 Phytosulfokine-beta7.21e-1453.01Show/hide
Query:  MSK-LVALFSVVALVTMSLLSSSEARPIATSTATSLDLNHIAHQVVSEKGHDDVC-EGGETKECLAKRTVEAHTDYIYTDDTK
        MSK L ALF++ AL+TMS+L SS+ARPI T +A S++   IAH    ++ H+D C E  E ++CL +RT+EAHTDYIY+ +TK
Subjt:  MSK-LVALFSVVALVTMSLLSSSEARPIATSTATSLDLNHIAHQVVSEKGHDDVC-EGGETKECLAKRTVEAHTDYIYTDDTK

A0A6J1BSJ0 Phytosulfokine-beta4.73e-1152.5Show/hide
Query:  MSKLVALFSVVALV-TMSLLSSSEARPIATSTATSLDLNHIAHQVVSEKGHDDVC-EGGETKECLAKRTVEAHTDYIYTD
        M+KL ALF++VALV TMSLL+SSEARP   + ATS+    I + V  E  + D+C E    ++CL +RT+ AHTDYIYT+
Subjt:  MSKLVALFSVVALV-TMSLLSSSEARPIATSTATSLDLNHIAHQVVSEKGHDDVC-EGGETKECLAKRTVEAHTDYIYTD

SwissProt top hitse value%identityAlignment
Q9FS10 Phytosulfokines2.2e-0639.74Show/hide
Query:  SKLVALFSVVALVTMSLLSSSEARPIATSTATSLDLNHIAHQVVSEKGHDDVCEGGETKECLAKRTVEAHTDYIYTDD
        SK + L  +  L ++SL  +  ARP+  + +T       +  V+ EK HD+ CEG   +ECL +RT+ AH DYIYT D
Subjt:  SKLVALFSVVALVTMSLLSSSEARPIATSTATSLDLNHIAHQVVSEKGHDDVCEGGETKECLAKRTVEAHTDYIYTDD

Arabidopsis top hitse value%identityAlignment
AT3G49780.1 phytosulfokine 4 precursor2.1e-0429.63Show/hide
Query:  MSKLVALFSVVALVTMSLLSSSEARPIATSTATSLDLNHIAHQVVSEKGHDDVCEGGETKECLAKRTVEAHTDYIYTDDTK
        M K   +F +  L+  +L  ++   P   +T T+L   +   ++  +K  ++ C G   +ECL +R++  HTDYIYT + K
Subjt:  MSKLVALFSVVALVTMSLLSSSEARPIATSTATSLDLNHIAHQVVSEKGHDDVCEGGETKECLAKRTVEAHTDYIYTDDTK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAAGCTCGTGGCTCTCTTCTCCGTCGTAGCCCTCGTGACAATGTCCCTTCTCTCCTCCTCCGAAGCTCGTCCCATTGCTACGTCCACCGCCACATCCCTC
GACCTCAACCATATCGCACATCAGGTCGTTTCTGAAAAGGGTCACGACGATGTTTGCGAGGGAGGAGAGACAAAGGAGTGCCTGGCTAAAAGAACGGTAGAGGCT
CATACCGATTACATCTATACCGATGATACCAAGTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAAAGCTCGTGGCTCTCTTCTCCGTCGTAGCCCTCGTGACAATGTCCCTTCTCTCCTCCTCCGAAGCTCGTCCCATTGCTACGTCCACCGCCACATCCCTC
GACCTCAACCATATCGCACATCAGGTCGTTTCTGAAAAGGGTCACGACGATGTTTGCGAGGGAGGAGAGACAAAGGAGTGCCTGGCTAAAAGAACGGTAGAGGCT
CATACCGATTACATCTATACCGATGATACCAAGTCATGA
Protein sequenceShow/hide protein sequence
MSKLVALFSVVALVTMSLLSSSEARPIATSTATSLDLNHIAHQVVSEKGHDDVCEGGETKECLAKRTVEAHTDYIYTDDTKS