; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Csor.00g059140 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g059140
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionMannan endo-1,4-beta-mannosidase
Genome locationCsor_Chr03:6768859..6770202
RNA-Seq ExpressionCsor.00g059140
SyntenyCsor.00g059140
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0007163 - establishment or maintenance of cell polarity (biological process)
GO:0016477 - cell migration (biological process)
GO:0051017 - actin filament bundle assembly (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0015629 - actin cytoskeleton (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016985 - mannan endo-1,4-beta-mannosidase activity (molecular function)
GO:0051015 - actin filament binding (molecular function)
InterPro domainsIPR008999 - Actin-crosslinking
IPR010431 - Fascin
IPR017853 - Glycoside hydrolase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604049.1 hypothetical protein SDJN03_04658, partial [Cucurbita argyrosperma subsp. sororia]4.89e-145100Show/hide
Query:  MELVFTKWVSAFLLCCCLISSKAFSVEGILGDDKVRGVNLGGWLVIEGWIKPSLFQGIPNGDMLDGDQVQLRSVTLQKFVSAENGGGTGVAVNRDVASSW
        MELVFTKWVSAFLLCCCLISSKAFSVEGILGDDKVRGVNLGGWLVIEGWIKPSLFQGIPNGDMLDGDQVQLRSVTLQKFVSAENGGGTGVAVNRDVASSW
Subjt:  MELVFTKWVSAFLLCCCLISSKAFSVEGILGDDKVRGVNLGGWLVIEGWIKPSLFQGIPNGDMLDGDQVQLRSVTLQKFVSAENGGGTGVAVNRDVASSW

Query:  ETFRLWRVSASEFQFRTVLGQFLTCDALGCSATAQSPRNSETFFVERKDNRVHLKLQTGAYLQAMITNQLTADYPGKPGWDDNAATFEMIVWKTSSLARN
        ETFRLWRVSASEFQFRTVLGQFLTCDALGCSATAQSPRNSETFFVERKDNRVHLKLQTGAYLQAMITNQLTADYPGKPGWDDNAATFEMIVWKTSSLARN
Subjt:  ETFRLWRVSASEFQFRTVLGQFLTCDALGCSATAQSPRNSETFFVERKDNRVHLKLQTGAYLQAMITNQLTADYPGKPGWDDNAATFEMIVWKTSSLARN

KAG7034215.1 hypothetical protein SDJN02_03942, partial [Cucurbita argyrosperma subsp. argyrosperma]3.54e-137100Show/hide
Query:  MELVFTKWVSAFLLCCCLISSKAFSVEGILGDDKVRGVNLGGWLVIEGWIKPSLFQGIPNGDMLDGDQVQLRSVTLQKFVSAENGGGTGVAVNRDVASSW
        MELVFTKWVSAFLLCCCLISSKAFSVEGILGDDKVRGVNLGGWLVIEGWIKPSLFQGIPNGDMLDGDQVQLRSVTLQKFVSAENGGGTGVAVNRDVASSW
Subjt:  MELVFTKWVSAFLLCCCLISSKAFSVEGILGDDKVRGVNLGGWLVIEGWIKPSLFQGIPNGDMLDGDQVQLRSVTLQKFVSAENGGGTGVAVNRDVASSW

Query:  ETFRLWRVSASEFQFRTVLGQFLTCDALGCSATAQSPRNSETFFVERKDNRVHLKLQTGAYLQAMITNQLTADYPGKPGWDDNAATFEMIV
        ETFRLWRVSASEFQFRTVLGQFLTCDALGCSATAQSPRNSETFFVERKDNRVHLKLQTGAYLQAMITNQLTADYPGKPGWDDNAATFEMIV
Subjt:  ETFRLWRVSASEFQFRTVLGQFLTCDALGCSATAQSPRNSETFFVERKDNRVHLKLQTGAYLQAMITNQLTADYPGKPGWDDNAATFEMIV

XP_022949769.1 probable glucan 1,3-beta-glucosidase A isoform X1 [Cucurbita moschata]3.01e-13299.48Show/hide
Query:  MELVFTKWVSAFLLCCCLISSKAFSVEGILGDDKVRGVNLGGWLVIEGWIKPSLFQGIPNGDMLDGDQVQLRSVTLQKFVSAENGGGTGVAVNRDVASSW
        MELVFTKWVSAFLLCCCLISSKAFSVEGILGDDKVRGVNLGGWLVIEGWIKPSLF+GIPNGDMLDGDQVQLRSVTLQKFVSAENGGGTGVAVNRDVASSW
Subjt:  MELVFTKWVSAFLLCCCLISSKAFSVEGILGDDKVRGVNLGGWLVIEGWIKPSLFQGIPNGDMLDGDQVQLRSVTLQKFVSAENGGGTGVAVNRDVASSW

Query:  ETFRLWRVSASEFQFRTVLGQFLTCDALGCSATAQSPRNSETFFVERKDNRVHLKLQTGAYLQAMITNQLTADYPGKPGWDDNAATFEMIV
        ETFRLWRVSASEFQFRTVLGQFLTCDALGCSATAQSPRNSETFFVERKDNRVHLKLQTGAYLQAMITNQLTADYPGKPGWDDNAATFEMIV
Subjt:  ETFRLWRVSASEFQFRTVLGQFLTCDALGCSATAQSPRNSETFFVERKDNRVHLKLQTGAYLQAMITNQLTADYPGKPGWDDNAATFEMIV

XP_022949770.1 probable glucan 1,3-beta-glucosidase A isoform X2 [Cucurbita moschata]1.29e-13299.48Show/hide
Query:  MELVFTKWVSAFLLCCCLISSKAFSVEGILGDDKVRGVNLGGWLVIEGWIKPSLFQGIPNGDMLDGDQVQLRSVTLQKFVSAENGGGTGVAVNRDVASSW
        MELVFTKWVSAFLLCCCLISSKAFSVEGILGDDKVRGVNLGGWLVIEGWIKPSLF+GIPNGDMLDGDQVQLRSVTLQKFVSAENGGGTGVAVNRDVASSW
Subjt:  MELVFTKWVSAFLLCCCLISSKAFSVEGILGDDKVRGVNLGGWLVIEGWIKPSLFQGIPNGDMLDGDQVQLRSVTLQKFVSAENGGGTGVAVNRDVASSW

Query:  ETFRLWRVSASEFQFRTVLGQFLTCDALGCSATAQSPRNSETFFVERKDNRVHLKLQTGAYLQAMITNQLTADYPGKPGWDDNAATFEMIV
        ETFRLWRVSASEFQFRTVLGQFLTCDALGCSATAQSPRNSETFFVERKDNRVHLKLQTGAYLQAMITNQLTADYPGKPGWDDNAATFEMIV
Subjt:  ETFRLWRVSASEFQFRTVLGQFLTCDALGCSATAQSPRNSETFFVERKDNRVHLKLQTGAYLQAMITNQLTADYPGKPGWDDNAATFEMIV

XP_023544214.1 probable glucan 1,3-beta-glucosidase A isoform X2 [Cucurbita pepo subsp. pepo]1.96e-12996.86Show/hide
Query:  MELVFTKWVSAFLLCCCLISSKAFSVEGILGDDKVRGVNLGGWLVIEGWIKPSLFQGIPNGDMLDGDQVQLRSVTLQKFVSAENGGGTGVAVNRDVASSW
        MEL+FTKWVSAFLLCCCLISSKAFSVEGILGDDKVRGVNLGGWLVIEGWIKPSLF+GIPNGDMLDGDQVQLRSVTLQKFVSAENGGGTGVAVNRDVASSW
Subjt:  MELVFTKWVSAFLLCCCLISSKAFSVEGILGDDKVRGVNLGGWLVIEGWIKPSLFQGIPNGDMLDGDQVQLRSVTLQKFVSAENGGGTGVAVNRDVASSW

Query:  ETFRLWRVSASEFQFRTVLGQFLTCDALGCSATAQSPRNSETFFVERKDNRVHLKLQTGAYLQAMITNQLTADYPGKPGWDDNAATFEMIV
        ETFRLWRVSASEFQFRTVLGQFLTCDA GCSATA SP NSETFFVERKDNRVHLKL+TGAYLQAMITNQLTADYPGKPGWDDNAATFEMIV
Subjt:  ETFRLWRVSASEFQFRTVLGQFLTCDALGCSATAQSPRNSETFFVERKDNRVHLKLQTGAYLQAMITNQLTADYPGKPGWDDNAATFEMIV

TrEMBL top hitse value%identityAlignment
A0A6J1GDQ7 Mannan endo-1,4-beta-mannosidase6.25e-13399.48Show/hide
Query:  MELVFTKWVSAFLLCCCLISSKAFSVEGILGDDKVRGVNLGGWLVIEGWIKPSLFQGIPNGDMLDGDQVQLRSVTLQKFVSAENGGGTGVAVNRDVASSW
        MELVFTKWVSAFLLCCCLISSKAFSVEGILGDDKVRGVNLGGWLVIEGWIKPSLF+GIPNGDMLDGDQVQLRSVTLQKFVSAENGGGTGVAVNRDVASSW
Subjt:  MELVFTKWVSAFLLCCCLISSKAFSVEGILGDDKVRGVNLGGWLVIEGWIKPSLFQGIPNGDMLDGDQVQLRSVTLQKFVSAENGGGTGVAVNRDVASSW

Query:  ETFRLWRVSASEFQFRTVLGQFLTCDALGCSATAQSPRNSETFFVERKDNRVHLKLQTGAYLQAMITNQLTADYPGKPGWDDNAATFEMIV
        ETFRLWRVSASEFQFRTVLGQFLTCDALGCSATAQSPRNSETFFVERKDNRVHLKLQTGAYLQAMITNQLTADYPGKPGWDDNAATFEMIV
Subjt:  ETFRLWRVSASEFQFRTVLGQFLTCDALGCSATAQSPRNSETFFVERKDNRVHLKLQTGAYLQAMITNQLTADYPGKPGWDDNAATFEMIV

A0A6J1GDW7 Mannan endo-1,4-beta-mannosidase1.46e-13299.48Show/hide
Query:  MELVFTKWVSAFLLCCCLISSKAFSVEGILGDDKVRGVNLGGWLVIEGWIKPSLFQGIPNGDMLDGDQVQLRSVTLQKFVSAENGGGTGVAVNRDVASSW
        MELVFTKWVSAFLLCCCLISSKAFSVEGILGDDKVRGVNLGGWLVIEGWIKPSLF+GIPNGDMLDGDQVQLRSVTLQKFVSAENGGGTGVAVNRDVASSW
Subjt:  MELVFTKWVSAFLLCCCLISSKAFSVEGILGDDKVRGVNLGGWLVIEGWIKPSLFQGIPNGDMLDGDQVQLRSVTLQKFVSAENGGGTGVAVNRDVASSW

Query:  ETFRLWRVSASEFQFRTVLGQFLTCDALGCSATAQSPRNSETFFVERKDNRVHLKLQTGAYLQAMITNQLTADYPGKPGWDDNAATFEMIV
        ETFRLWRVSASEFQFRTVLGQFLTCDALGCSATAQSPRNSETFFVERKDNRVHLKLQTGAYLQAMITNQLTADYPGKPGWDDNAATFEMIV
Subjt:  ETFRLWRVSASEFQFRTVLGQFLTCDALGCSATAQSPRNSETFFVERKDNRVHLKLQTGAYLQAMITNQLTADYPGKPGWDDNAATFEMIV

A0A6J1IMQ7 Mannan endo-1,4-beta-mannosidase1.01e-12695.29Show/hide
Query:  MELVFTKWVSAFLLCCCLISSKAFSVEGILGDDKVRGVNLGGWLVIEGWIKPSLFQGIPNGDMLDGDQVQLRSVTLQKFVSAENGGGTGVAVNRDVASSW
        MELVFTKWVSAF LCCCLISSKAFSVEGILGD+KVRGVNLGGWLVIEGWIKPSLF+GIPNGDMLDG+QVQL SVTL+KFVSAENGGGTGVAV+RDVASSW
Subjt:  MELVFTKWVSAFLLCCCLISSKAFSVEGILGDDKVRGVNLGGWLVIEGWIKPSLFQGIPNGDMLDGDQVQLRSVTLQKFVSAENGGGTGVAVNRDVASSW

Query:  ETFRLWRVSASEFQFRTVLGQFLTCDALGCSATAQSPRNSETFFVERKDNRVHLKLQTGAYLQAMITNQLTADYPGKPGWDDNAATFEMIV
        ETFRLWRVSASEFQFRTVLGQFL CDALGCSATAQSPRNSETFFVERKDNRVHLKL+TGAYLQAMITNQLTADYPGKPGWDDNAATFEMIV
Subjt:  ETFRLWRVSASEFQFRTVLGQFLTCDALGCSATAQSPRNSETFFVERKDNRVHLKLQTGAYLQAMITNQLTADYPGKPGWDDNAATFEMIV

A0A6J1IQ61 Mannan endo-1,4-beta-mannosidase2.02e-12193.72Show/hide
Query:  MELVFTKWVSAFLLCCCLISSKAFSVEGILGDDKVRGVNLGGWLVIEGWIKPSLFQGIPNGDMLDGDQVQLRSVTLQKFVSAENGGGTGVAVNRDVASSW
        MELVFTKWVSAF LCCCLISSKAFSVEGILGD+KVRGVNLGGWLVIEGWIKPSLF+GIPNGDML    VQL SVTL+KFVSAENGGGTGVAV+RDVASSW
Subjt:  MELVFTKWVSAFLLCCCLISSKAFSVEGILGDDKVRGVNLGGWLVIEGWIKPSLFQGIPNGDMLDGDQVQLRSVTLQKFVSAENGGGTGVAVNRDVASSW

Query:  ETFRLWRVSASEFQFRTVLGQFLTCDALGCSATAQSPRNSETFFVERKDNRVHLKLQTGAYLQAMITNQLTADYPGKPGWDDNAATFEMIV
        ETFRLWRVSASEFQFRTVLGQFL CDALGCSATAQSPRNSETFFVERKDNRVHLKL+TGAYLQAMITNQLTADYPGKPGWDDNAATFEMIV
Subjt:  ETFRLWRVSASEFQFRTVLGQFLTCDALGCSATAQSPRNSETFFVERKDNRVHLKLQTGAYLQAMITNQLTADYPGKPGWDDNAATFEMIV

A0A6J1IU40 Mannan endo-1,4-beta-mannosidase2.33e-12695.29Show/hide
Query:  MELVFTKWVSAFLLCCCLISSKAFSVEGILGDDKVRGVNLGGWLVIEGWIKPSLFQGIPNGDMLDGDQVQLRSVTLQKFVSAENGGGTGVAVNRDVASSW
        MELVFTKWVSAF LCCCLISSKAFSVEGILGD+KVRGVNLGGWLVIEGWIKPSLF+GIPNGDMLDG+QVQL SVTL+KFVSAENGGGTGVAV+RDVASSW
Subjt:  MELVFTKWVSAFLLCCCLISSKAFSVEGILGDDKVRGVNLGGWLVIEGWIKPSLFQGIPNGDMLDGDQVQLRSVTLQKFVSAENGGGTGVAVNRDVASSW

Query:  ETFRLWRVSASEFQFRTVLGQFLTCDALGCSATAQSPRNSETFFVERKDNRVHLKLQTGAYLQAMITNQLTADYPGKPGWDDNAATFEMIV
        ETFRLWRVSASEFQFRTVLGQFL CDALGCSATAQSPRNSETFFVERKDNRVHLKL+TGAYLQAMITNQLTADYPGKPGWDDNAATFEMIV
Subjt:  ETFRLWRVSASEFQFRTVLGQFLTCDALGCSATAQSPRNSETFFVERKDNRVHLKLQTGAYLQAMITNQLTADYPGKPGWDDNAATFEMIV

SwissProt top hitse value%identityAlignment
D4AJL7 Probable glucan 1,3-beta-glucosidase ARB_044676.5e-0468Show/hide
Query:  DDKVRGVNLGGWLVIEGWIKPSLFQ
        DD +RGVNLGGWLV+E WI P +F+
Subjt:  DDKVRGVNLGGWLVIEGWIKPSLFQ

O93983 Glucan 1,3-beta-glucosidase 25.0e-0462.07Show/hide
Query:  DDKVRGVNLGGWLVIEGWIKPSLFQGIPN
        +DK+RGVNLGGW V+E +I PSLF+   N
Subjt:  DDKVRGVNLGGWLVIEGWIKPSLFQGIPN

Q12725 Glucan 1,3-beta-glucosidase2.9e-0459.38Show/hide
Query:  GDDKVRGVNLGGWLVIEGWIKPSLFQGIPNGD
        G +KV GVNLGGW V+E +I PSLF+   N D
Subjt:  GDDKVRGVNLGGWLVIEGWIKPSLFQGIPNGD

Q5B5X8 Probable glucan 1,3-beta-glucosidase A3.8e-0482.61Show/hide
Query:  DKVRGVNLGGWLVIEGWIKPSLF
        +KVRGVNLGGWLV+E WI PSLF
Subjt:  DKVRGVNLGGWLVIEGWIKPSLF

Q96V64 Glucan 1,3-beta-glucosidase3.5e-0562.86Show/hide
Query:  DDKVRGVNLGGWLVIEGWIKPSLFQGIPN-GDMLD
        + KVRGVNLGGW V+E WI PS+FQ   N GD++D
Subjt:  DDKVRGVNLGGWLVIEGWIKPSLFQGIPN-GDMLD

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACTTGTTTTCACGAAATGGGTATCGGCGTTTCTTCTCTGCTGTTGTCTTATCTCCTCTAAAGCATTTTCAGTGGAGGGAATTCTTGGGGATGATAAAGTCAGAGG
AGTGAACTTAGGAGGATGGTTGGTGATTGAAGGTTGGATTAAACCTTCCCTTTTCCAAGGCATCCCCAATGGGGACATGCTAGATGGAGATCAGGTTCAATTGAGGTCCG
TAACATTGCAGAAGTTCGTTAGCGCTGAGAATGGAGGAGGCACAGGTGTTGCAGTCAATAGAGATGTTGCATCTTCATGGGAAACCTTCAGGTTATGGAGAGTTTCTGCA
TCAGAATTTCAATTCCGTACTGTCCTCGGGCAGTTTCTAACATGTGATGCCTTGGGATGCTCTGCAACAGCTCAATCGCCCAGGAACTCTGAAACTTTCTTTGTTGAAAG
AAAAGACAACAGAGTGCACCTAAAACTTCAGACTGGAGCCTATCTACAGGCTATGATAACAAATCAGCTGACAGCTGACTATCCAGGGAAGCCAGGATGGGATGACAATG
CTGCCACTTTTGAAATGATTGTATGGAAAACATCCAGCCTTGCTCGGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAACTTGTTTTCACGAAATGGGTATCGGCGTTTCTTCTCTGCTGTTGTCTTATCTCCTCTAAAGCATTTTCAGTGGAGGGAATTCTTGGGGATGATAAAGTCAGAGG
AGTGAACTTAGGAGGATGGTTGGTGATTGAAGGTTGGATTAAACCTTCCCTTTTCCAAGGCATCCCCAATGGGGACATGCTAGATGGAGATCAGGTTCAATTGAGGTCCG
TAACATTGCAGAAGTTCGTTAGCGCTGAGAATGGAGGAGGCACAGGTGTTGCAGTCAATAGAGATGTTGCATCTTCATGGGAAACCTTCAGGTTATGGAGAGTTTCTGCA
TCAGAATTTCAATTCCGTACTGTCCTCGGGCAGTTTCTAACATGTGATGCCTTGGGATGCTCTGCAACAGCTCAATCGCCCAGGAACTCTGAAACTTTCTTTGTTGAAAG
AAAAGACAACAGAGTGCACCTAAAACTTCAGACTGGAGCCTATCTACAGGCTATGATAACAAATCAGCTGACAGCTGACTATCCAGGGAAGCCAGGATGGGATGACAATG
CTGCCACTTTTGAAATGATTGTATGGAAAACATCCAGCCTTGCTCGGAATTGA
Protein sequenceShow/hide protein sequence
MELVFTKWVSAFLLCCCLISSKAFSVEGILGDDKVRGVNLGGWLVIEGWIKPSLFQGIPNGDMLDGDQVQLRSVTLQKFVSAENGGGTGVAVNRDVASSWETFRLWRVSA
SEFQFRTVLGQFLTCDALGCSATAQSPRNSETFFVERKDNRVHLKLQTGAYLQAMITNQLTADYPGKPGWDDNAATFEMIVWKTSSLARN