; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Csor.00g060470 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g060470
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionTransmembrane protein
Genome locationCsor_Chr03:6192239..6192832
RNA-Seq ExpressionCsor.00g060470
SyntenyCsor.00g060470
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603917.1 hypothetical protein SDJN03_04526, partial [Cucurbita argyrosperma subsp. sororia]3.30e-137100Show/hide
Query:  MDKATPPVEVLTAQQEAMEATSLHRFLASKPPLLTIDPHKFSLTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPPTITPPETVDVRFRKRSRRR
        MDKATPPVEVLTAQQEAMEATSLHRFLASKPPLLTIDPHKFSLTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPPTITPPETVDVRFRKRSRRR
Subjt:  MDKATPPVEVLTAQQEAMEATSLHRFLASKPPLLTIDPHKFSLTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPPTITPPETVDVRFRKRSRRR

Query:  SKQESEDGAAMGNVRARKAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
        SKQESEDGAAMGNVRARKAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
Subjt:  SKQESEDGAAMGNVRARKAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG

XP_022950633.1 uncharacterized protein LOC111453672 [Cucurbita moschata]9.16e-12298.33Show/hide
Query:  MEATSLHRFLASKPPLLTIDPHKFSLTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPPTITPPETVDVRFRKRSRRRSKQESEDGAAMGNVRAR
        MEATSLHRFLASKPPLLTIDPHKFS TSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPP ITPPETVDVRFRKRSRRRSKQESEDGAAMGNV AR
Subjt:  MEATSLHRFLASKPPLLTIDPHKFSLTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPPTITPPETVDVRFRKRSRRRSKQESEDGAAMGNVRAR

Query:  KAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
        KAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
Subjt:  KAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG

XP_022979054.1 uncharacterized protein LOC111478809 [Cucurbita maxima]2.16e-12097.22Show/hide
Query:  MEATSLHRFLASKPPLLTIDPHKFSLTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPPTITPPETVDVRFRKRSRRRSKQESEDGAAMGNVRAR
        ME+TSLHRFLAS+PPLLTI PHKFS TSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPP ITPPETVDVRFRKRSRRRSKQESEDGAAMGNVRAR
Subjt:  MEATSLHRFLASKPPLLTIDPHKFSLTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPPTITPPETVDVRFRKRSRRRSKQESEDGAAMGNVRAR

Query:  KAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
        KAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
Subjt:  KAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG

XP_023522380.1 uncharacterized protein LOC111786303, partial [Cucurbita pepo subsp. pepo]9.80e-10598.73Show/hide
Query:  FSLTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPPTITPPETVDVRFRKRSRRRSKQESEDGAAMGNVRARKAPVEIASKKPKKWEEMDLAEKA
        FS TSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPP ITPPETVDVRFRKRSRRRSKQESEDGAAMGNVRARKAPVEIASKKPKKWEEMDLAEKA
Subjt:  FSLTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPPTITPPETVDVRFRKRSRRRSKQESEDGAAMGNVRARKAPVEIASKKPKKWEEMDLAEKA

Query:  TELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
        TELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
Subjt:  TELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG

XP_023544554.1 uncharacterized protein LOC111804097 [Cucurbita pepo subsp. pepo]7.85e-12398.89Show/hide
Query:  MEATSLHRFLASKPPLLTIDPHKFSLTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPPTITPPETVDVRFRKRSRRRSKQESEDGAAMGNVRAR
        MEATSLHRFLASKPPLLTIDPHKFS TSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPP ITPPETVDVRFRKRSRRRSKQESEDGAAMGNVRAR
Subjt:  MEATSLHRFLASKPPLLTIDPHKFSLTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPPTITPPETVDVRFRKRSRRRSKQESEDGAAMGNVRAR

Query:  KAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
        KAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
Subjt:  KAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG

TrEMBL top hitse value%identityAlignment
A0A0A0KME2 Uncharacterized protein1.83e-10479.19Show/hide
Query:  MDKATPPVEVLTAQQEAMEATSLHRFLASKPPLLTIDPHKFSLTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPPTITPPETVDVRFRKRSRRR
        MDKATP  E    + E ME+ SLH+ LASKPPL TI+P KFS TSQ Q+FF +LRHQ+PLRIKPINAT TDGD+APPQVPP ITPPETV+VRFRKRSRRR
Subjt:  MDKATPPVEVLTAQQEAMEATSLHRFLASKPPLLTIDPHKFSLTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPPTITPPETVDVRFRKRSRRR

Query:  SKQESEDGAAMGNVRARKAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
        SKQE EDGAAMGN R RKA  E+ S K KKWEEM +AEK  E+YMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTS+FKG
Subjt:  SKQESEDGAAMGNVRARKAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG

A0A1S3B215 uncharacterized protein LOC1034851196.02e-10283.33Show/hide
Query:  MEATSLHRFLASKPPLLTIDPHKFSLTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPPTITPPETVDVRFRKRSRRRSKQESEDGAAMGNVRAR
        ME+ SLH+ LASKPPL TI+P KFS TSQ Q+FF SLR Q+PLRIKPINATDTDGD+APPQVPP ITPPETV+VRFRKRSRRRSK+E EDGAAMGN R R
Subjt:  MEATSLHRFLASKPPLLTIDPHKFSLTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPPTITPPETVDVRFRKRSRRRSKQESEDGAAMGNVRAR

Query:  KAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
        KA VE++S K KKWEEM + EKA ELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTS+FKG
Subjt:  KAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG

A0A5A7SKL6 Putative transmembrane protein6.02e-10283.33Show/hide
Query:  MEATSLHRFLASKPPLLTIDPHKFSLTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPPTITPPETVDVRFRKRSRRRSKQESEDGAAMGNVRAR
        ME+ SLH+ LASKPPL TI+P KFS TSQ Q+FF SLR Q+PLRIKPINATDTDGD+APPQVPP ITPPETV+VRFRKRSRRRSK+E EDGAAMGN R R
Subjt:  MEATSLHRFLASKPPLLTIDPHKFSLTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPPTITPPETVDVRFRKRSRRRSKQESEDGAAMGNVRAR

Query:  KAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
        KA VE++S K KKWEEM + EKA ELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTS+FKG
Subjt:  KAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG

A0A6J1GFF1 uncharacterized protein LOC1114536724.44e-12298.33Show/hide
Query:  MEATSLHRFLASKPPLLTIDPHKFSLTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPPTITPPETVDVRFRKRSRRRSKQESEDGAAMGNVRAR
        MEATSLHRFLASKPPLLTIDPHKFS TSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPP ITPPETVDVRFRKRSRRRSKQESEDGAAMGNV AR
Subjt:  MEATSLHRFLASKPPLLTIDPHKFSLTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPPTITPPETVDVRFRKRSRRRSKQESEDGAAMGNVRAR

Query:  KAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
        KAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
Subjt:  KAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG

A0A6J1IVM3 uncharacterized protein LOC1114788091.04e-12097.22Show/hide
Query:  MEATSLHRFLASKPPLLTIDPHKFSLTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPPTITPPETVDVRFRKRSRRRSKQESEDGAAMGNVRAR
        ME+TSLHRFLAS+PPLLTI PHKFS TSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPP ITPPETVDVRFRKRSRRRSKQESEDGAAMGNVRAR
Subjt:  MEATSLHRFLASKPPLLTIDPHKFSLTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPPTITPPETVDVRFRKRSRRRSKQESEDGAAMGNVRAR

Query:  KAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
        KAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
Subjt:  KAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G17972.1 unknown protein6.3e-3146.89Show/hide
Query:  SLHRFLASKPPLLTIDPHKFSLTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPPTITPP-ETVDVRFRKRSRRRSKQESEDGAAMGNVRARKAP
        SLH FLA    ++ +    ++ T     F L   H+   R   IN  ++ GD         IT P + V++RF++ SRR+ ++E   G   G    +K  
Subjt:  SLHRFLASKPPLLTIDPHKFSLTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPPTITPP-ETVDVRFRKRSRRRSKQESEDGAAMGNVRARKAP

Query:  VEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
        V+      K WEEM L EKA ELY+GEKGLLFWLNK AYASI+I+IGGWI FRFVGP+ NLYQLDTPPL P +I KG
Subjt:  VEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAAAGCAACTCCGCCAGTCGAAGTGCTCACTGCTCAGCAAGAAGCCATGGAAGCGACCAGTCTCCACCGATTTCTGGCGTCTAAACCGCCGCTCTTGACC
ATCGATCCACATAAATTCTCCCTTACATCTCAGAATCAGGTATTCTTTCTATCTCTACGCCATCAACAGCCTCTCAGGATCAAACCGATCAACGCCACGGACACC
GACGGCGACAGCGCGCCACCGCAGGTTCCGCCGACAATAACGCCTCCGGAGACGGTTGATGTTCGGTTTCGGAAGAGGTCGAGAAGACGATCGAAACAGGAGAGC
GAGGATGGAGCGGCGATGGGGAATGTGCGGGCGAGAAAGGCGCCGGTGGAGATTGCTTCCAAGAAGCCTAAGAAATGGGAGGAGATGGACTTGGCGGAGAAGGCG
ACGGAGCTGTATATGGGAGAGAAGGGTTTGTTGTTTTGGCTAAACAAGTTTGCTTATGCTTCCATTTTTATCATGATTGGTGGTTGGATTGTGTTCCGATTTGTT
GGGCCTTCGCTCAATCTTTACCAGTTGGATACTCCACCATTATCTCCGACTTCCATTTTCAAGGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATAAAGCAACTCCGCCAGTCGAAGTGCTCACTGCTCAGCAAGAAGCCATGGAAGCGACCAGTCTCCACCGATTTCTGGCGTCTAAACCGCCGCTCTTGACC
ATCGATCCACATAAATTCTCCCTTACATCTCAGAATCAGGTATTCTTTCTATCTCTACGCCATCAACAGCCTCTCAGGATCAAACCGATCAACGCCACGGACACC
GACGGCGACAGCGCGCCACCGCAGGTTCCGCCGACAATAACGCCTCCGGAGACGGTTGATGTTCGGTTTCGGAAGAGGTCGAGAAGACGATCGAAACAGGAGAGC
GAGGATGGAGCGGCGATGGGGAATGTGCGGGCGAGAAAGGCGCCGGTGGAGATTGCTTCCAAGAAGCCTAAGAAATGGGAGGAGATGGACTTGGCGGAGAAGGCG
ACGGAGCTGTATATGGGAGAGAAGGGTTTGTTGTTTTGGCTAAACAAGTTTGCTTATGCTTCCATTTTTATCATGATTGGTGGTTGGATTGTGTTCCGATTTGTT
GGGCCTTCGCTCAATCTTTACCAGTTGGATACTCCACCATTATCTCCGACTTCCATTTTCAAGGGCTGA
Protein sequenceShow/hide protein sequence
MDKATPPVEVLTAQQEAMEATSLHRFLASKPPLLTIDPHKFSLTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPPTITPPETVDVRFRKRSRRRSKQES
EDGAAMGNVRARKAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG