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Csor.00g070480 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g070480
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionCCHC-type domain-containing protein
Genome locationCsor_Chr14:10729563..10729958
RNA-Seq ExpressionCsor.00g070480
SyntenyCsor.00g070480
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581711.1 hypothetical protein SDJN03_21713, partial [Cucurbita argyrosperma subsp. sororia]4.39e-85100Show/hide
Query:  MGDLESIDEYSRKLIIIVNKLRGLDNAVDDIQVVKKLLRSTSAKFLQITSTIEEFNDLKTKSVDKIIGSLKAHEERLQGFGEKNETVLLTRAGWKERENA
        MGDLESIDEYSRKLIIIVNKLRGLDNAVDDIQVVKKLLRSTSAKFLQITSTIEEFNDLKTKSVDKIIGSLKAHEERLQGFGEKNETVLLTRAGWKERENA
Subjt:  MGDLESIDEYSRKLIIIVNKLRGLDNAVDDIQVVKKLLRSTSAKFLQITSTIEEFNDLKTKSVDKIIGSLKAHEERLQGFGEKNETVLLTRAGWKERENA

Query:  KSSKKEWKDQSSSRGGRGWGPGRWRGHARSD
        KSSKKEWKDQSSSRGGRGWGPGRWRGHARSD
Subjt:  KSSKKEWKDQSSSRGGRGWGPGRWRGHARSD

XP_022925457.1 uncharacterized protein LOC111432756 [Cucurbita moschata]2.01e-6384.73Show/hide
Query:  MGDLESIDEYSRKLIIIVNKLRGLDNAVDDIQVVKKLLRSTSAKFLQITSTIEEFNDLKTKSVDKIIGSLKAHEERLQGFGEKNETVLLTRAGWKERENA
        MGD ESIDEYS KL IIVNKLRG  N VDDIQVVKKLLRSTSAKFLQITSTIEEF+ LKTKSVD+IIGSLKAHEERLQGF EK+ETVLLT   WKERE A
Subjt:  MGDLESIDEYSRKLIIIVNKLRGLDNAVDDIQVVKKLLRSTSAKFLQITSTIEEFNDLKTKSVDKIIGSLKAHEERLQGFGEKNETVLLTRAGWKERENA

Query:  KSSKKEWKDQSSSRGGRGWGPGRWRGHARSD
        KSSKKEWKDQ SSRG RGWG GRWRG  RSD
Subjt:  KSSKKEWKDQSSSRGGRGWGPGRWRGHARSD

XP_022928017.1 uncharacterized protein LOC111434926 [Cucurbita moschata]1.82e-6184.5Show/hide
Query:  MGDLESIDEYSRKLIIIVNKLRGLDNAVDDIQVVKKLLRSTSAKFLQITSTIEEFNDLKTKSVDKIIGSLKAHEERLQGFGEKNETVLLTRAGWKERENA
        MGD ESIDEY  KL IIVNKLRGL N VDDIQVVKKLLRSTSAKFLQITSTI+EF+DLKTK VD+IIGSLKAHEERLQGFGEK+ETVLLTRA W  RENA
Subjt:  MGDLESIDEYSRKLIIIVNKLRGLDNAVDDIQVVKKLLRSTSAKFLQITSTIEEFNDLKTKSVDKIIGSLKAHEERLQGFGEKNETVLLTRAGWKERENA

Query:  KSSKKEWKDQSSSRGGRGWGPGRWRGHAR
        KSSKKE KDQ SSRGGRG G GRWRG  R
Subjt:  KSSKKEWKDQSSSRGGRGWGPGRWRGHAR

XP_022931754.1 uncharacterized protein LOC111438021 [Cucurbita moschata]3.51e-6383.97Show/hide
Query:  MGDLESIDEYSRKLIIIVNKLRGLDNAVDDIQVVKKLLRSTSAKFLQITSTIEEFNDLKTKSVDKIIGSLKAHEERLQGFGEKNETVLLTRAGWKERENA
        MGD ESIDEY  KL IIVNKLRGL N VDDIQVVKKLLRSTSAKFLQITSTIEEF+DLKTK VD+IIGSLKAHEERLQGFGEK ETVLLT A WKERE A
Subjt:  MGDLESIDEYSRKLIIIVNKLRGLDNAVDDIQVVKKLLRSTSAKFLQITSTIEEFNDLKTKSVDKIIGSLKAHEERLQGFGEKNETVLLTRAGWKERENA

Query:  KSSKKEWKDQSSSRGGRGWGPGRWRGHARSD
         SSKKEWKDQ SS+GGRG G  RWRG  RSD
Subjt:  KSSKKEWKDQSSSRGGRGWGPGRWRGHARSD

XP_023521071.1 uncharacterized protein LOC111784686 [Cucurbita pepo subsp. pepo]2.68e-6187.29Show/hide
Query:  MGDLESIDEYSRKLIIIVNKLRGLDNAVDDIQVVKKLLRSTSAKFLQITSTIEEFNDLKTKSVDKIIGSLKAHEERLQGFGEKNETVLLTRAGWKERENA
        MGD ESIDEY  K  IIVNKLRGL N VDDIQVVKKLLRSTSAKFLQITSTIEEF+DLKTKS+D+IIGSLKAHEERLQGFGEK+ETVLLT A WKERE A
Subjt:  MGDLESIDEYSRKLIIIVNKLRGLDNAVDDIQVVKKLLRSTSAKFLQITSTIEEFNDLKTKSVDKIIGSLKAHEERLQGFGEKNETVLLTRAGWKERENA

Query:  KSSKKEWKDQSSSRGGRG
        KSSKKEWKDQ SSRGGRG
Subjt:  KSSKKEWKDQSSSRGGRG

TrEMBL top hitse value%identityAlignment
A0A6A6KQK7 DUF4219 domain-containing protein4.52e-4165.15Show/hide
Query:  MGDLESIDEYSRKLIIIVNKLRGLDNAVDDIQVVKKLLRSTSAKFLQITSTIEEFNDLKTKSVDKIIGSLKAHEERLQGFGEKN-ETVLLTRAGWKEREN
        M D E+ID++S KL IIVNKLR L N V+D +V+KKLLRS+S+KFLQI S IEEF+DLKTKSV+++IGSLKAHEERL G G  + ETVLLTRA WK RE 
Subjt:  MGDLESIDEYSRKLIIIVNKLRGLDNAVDDIQVVKKLLRSTSAKFLQITSTIEEFNDLKTKSVDKIIGSLKAHEERLQGFGEKN-ETVLLTRAGWKEREN

Query:  AKSSKKEWKDQSSSRGGRGWGPGRWRGHARSD
          SSKK   D +  RGGRG G GR RG  RS+
Subjt:  AKSSKKEWKDQSSSRGGRGWGPGRWRGHARSD

A0A6J1EBR6 uncharacterized protein LOC1114327569.71e-6484.73Show/hide
Query:  MGDLESIDEYSRKLIIIVNKLRGLDNAVDDIQVVKKLLRSTSAKFLQITSTIEEFNDLKTKSVDKIIGSLKAHEERLQGFGEKNETVLLTRAGWKERENA
        MGD ESIDEYS KL IIVNKLRG  N VDDIQVVKKLLRSTSAKFLQITSTIEEF+ LKTKSVD+IIGSLKAHEERLQGF EK+ETVLLT   WKERE A
Subjt:  MGDLESIDEYSRKLIIIVNKLRGLDNAVDDIQVVKKLLRSTSAKFLQITSTIEEFNDLKTKSVDKIIGSLKAHEERLQGFGEKNETVLLTRAGWKERENA

Query:  KSSKKEWKDQSSSRGGRGWGPGRWRGHARSD
        KSSKKEWKDQ SSRG RGWG GRWRG  RSD
Subjt:  KSSKKEWKDQSSSRGGRGWGPGRWRGHARSD

A0A6J1EIR1 uncharacterized protein LOC1114349268.81e-6284.5Show/hide
Query:  MGDLESIDEYSRKLIIIVNKLRGLDNAVDDIQVVKKLLRSTSAKFLQITSTIEEFNDLKTKSVDKIIGSLKAHEERLQGFGEKNETVLLTRAGWKERENA
        MGD ESIDEY  KL IIVNKLRGL N VDDIQVVKKLLRSTSAKFLQITSTI+EF+DLKTK VD+IIGSLKAHEERLQGFGEK+ETVLLTRA W  RENA
Subjt:  MGDLESIDEYSRKLIIIVNKLRGLDNAVDDIQVVKKLLRSTSAKFLQITSTIEEFNDLKTKSVDKIIGSLKAHEERLQGFGEKNETVLLTRAGWKERENA

Query:  KSSKKEWKDQSSSRGGRGWGPGRWRGHAR
        KSSKKE KDQ SSRGGRG G GRWRG  R
Subjt:  KSSKKEWKDQSSSRGGRGWGPGRWRGHAR

A0A6J1EV45 uncharacterized protein LOC1114380211.70e-6383.97Show/hide
Query:  MGDLESIDEYSRKLIIIVNKLRGLDNAVDDIQVVKKLLRSTSAKFLQITSTIEEFNDLKTKSVDKIIGSLKAHEERLQGFGEKNETVLLTRAGWKERENA
        MGD ESIDEY  KL IIVNKLRGL N VDDIQVVKKLLRSTSAKFLQITSTIEEF+DLKTK VD+IIGSLKAHEERLQGFGEK ETVLLT A WKERE A
Subjt:  MGDLESIDEYSRKLIIIVNKLRGLDNAVDDIQVVKKLLRSTSAKFLQITSTIEEFNDLKTKSVDKIIGSLKAHEERLQGFGEKNETVLLTRAGWKERENA

Query:  KSSKKEWKDQSSSRGGRGWGPGRWRGHARSD
         SSKKEWKDQ SS+GGRG G  RWRG  RSD
Subjt:  KSSKKEWKDQSSSRGGRGWGPGRWRGHARSD

A0A6J1F4E6 uncharacterized protein LOC1114402388.15e-5987.07Show/hide
Query:  MGDLESIDEYSRKLIIIVNKLRGLDNAVDDIQVVKKLLRSTSAKFLQITSTIEEFNDLKTKSVDKIIGSLKAHEERLQGFGEKNETVLLTRAGWKERENA
        MGD ESIDEYS K  IIVNKLRGL N VDDIQVVKKLLRSTSAKFLQITSTIEEF+DLKTKSVD+IIGSLKAHEERLQ FGEK+ETVLLT   WKERE A
Subjt:  MGDLESIDEYSRKLIIIVNKLRGLDNAVDDIQVVKKLLRSTSAKFLQITSTIEEFNDLKTKSVDKIIGSLKAHEERLQGFGEKNETVLLTRAGWKERENA

Query:  KSSKKEWKDQSSSRGG
        KSSKKEWKDQ SSRGG
Subjt:  KSSKKEWKDQSSSRGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGATTTAGAAAGTATTGATGAGTATTCTAGAAAACTCATCATTATTGTCAACAAATTGAGAGGTCTCGACAATGCTGTGGATGATATTCAAGTAGTTAAGAAACT
TCTACGATCCACCTCTGCAAAGTTTCTTCAAATCACTTCAACGATTGAGGAGTTCAATGATCTCAAAACGAAATCTGTTGATAAGATTATTGGATCACTCAAGGCACATG
AAGAAAGGTTGCAAGGGTTTGGAGAAAAAAATGAAACCGTTCTCCTCACTCGTGCAGGATGGAAGGAACGAGAGAATGCAAAATCCTCAAAGAAAGAATGGAAGGATCAA
AGCAGTTCCAGAGGAGGTAGGGGATGGGGTCCTGGAAGATGGAGAGGCCATGCGAGAAGTGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTGATTTAGAAAGTATTGATGAGTATTCTAGAAAACTCATCATTATTGTCAACAAATTGAGAGGTCTCGACAATGCTGTGGATGATATTCAAGTAGTTAAGAAACT
TCTACGATCCACCTCTGCAAAGTTTCTTCAAATCACTTCAACGATTGAGGAGTTCAATGATCTCAAAACGAAATCTGTTGATAAGATTATTGGATCACTCAAGGCACATG
AAGAAAGGTTGCAAGGGTTTGGAGAAAAAAATGAAACCGTTCTCCTCACTCGTGCAGGATGGAAGGAACGAGAGAATGCAAAATCCTCAAAGAAAGAATGGAAGGATCAA
AGCAGTTCCAGAGGAGGTAGGGGATGGGGTCCTGGAAGATGGAGAGGCCATGCGAGAAGTGACTAG
Protein sequenceShow/hide protein sequence
MGDLESIDEYSRKLIIIVNKLRGLDNAVDDIQVVKKLLRSTSAKFLQITSTIEEFNDLKTKSVDKIIGSLKAHEERLQGFGEKNETVLLTRAGWKERENAKSSKKEWKDQ
SSSRGGRGWGPGRWRGHARSD