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Csor.00g080380 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g080380
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionRNA (C5-cytosine) methyltransferase
Genome locationCsor_Chr01:13072463..13076026
RNA-Seq ExpressionCsor.00g080380
SyntenyCsor.00g080380
Gene Ontology termsGO:0001510 - RNA methylation (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608350.1 hypothetical protein SDJN03_01692, partial [Cucurbita argyrosperma subsp. sororia]2.66e-85100Show/hide
Query:  MRCGINRTEGSAAGKEDNRRMSNAERSAYFARREAAKILRRVLEGSTSSYRFNQRCFSCSEIKSVLTFVLGSDLHDHPLVAKMGASSCNGVVSQFLQAVS
        MRCGINRTEGSAAGKEDNRRMSNAERSAYFARREAAKILRRVLEGSTSSYRFNQRCFSCSEIKSVLTFVLGSDLHDHPLVAKMGASSCNGVVSQFLQAVS
Subjt:  MRCGINRTEGSAAGKEDNRRMSNAERSAYFARREAAKILRRVLEGSTSSYRFNQRCFSCSEIKSVLTFVLGSDLHDHPLVAKMGASSCNGVVSQFLQAVS

Query:  INTLVRFICRNQWDSSASPPRLVEITILA
        INTLVRFICRNQWDSSASPPRLVEITILA
Subjt:  INTLVRFICRNQWDSSASPPRLVEITILA

KAG6608359.1 hypothetical protein SDJN03_01701, partial [Cucurbita argyrosperma subsp. sororia]2.52e-4971.32Show/hide
Query:  MRCGINRTEGSAAGKEDNRRMSNAERSAYFARREAAKILRRVLEGSTSSYRFNQRCFSCSEIKSVLTFVLGSDLHDHPLVAKMGASSCNGVVSQFLQAVS
        MRCGINRTEGSAAGKEDNRRMSNAERSAYFARREAAKILRRVLEGSTSSYRFNQ       + ++L    GSDLHDHPLVAKMGASSC            
Subjt:  MRCGINRTEGSAAGKEDNRRMSNAERSAYFARREAAKILRRVLEGSTSSYRFNQRCFSCSEIKSVLTFVLGSDLHDHPLVAKMGASSCNGVVSQFLQAVS

Query:  INTLVRFICRNQWDSSASPPRLVEITILA
                 +NQWDSSASPPRLVEITILA
Subjt:  INTLVRFICRNQWDSSASPPRLVEITILA

XP_038898177.1 28S rRNA (cytosine-C(5))-methyltransferase-like isoform X1 [Benincasa hispida]2.67e-0881.4Show/hide
Query:  NRTEGSA---AGKEDNRRMSNAERSAYFARREAAKILRRVLEG
        NRT+ SA   AGK +NRRMSNA+RSAYFARREAAKILRRVLEG
Subjt:  NRTEGSA---AGKEDNRRMSNAERSAYFARREAAKILRRVLEG

XP_038898178.1 28S rRNA (cytosine-C(5))-methyltransferase-like isoform X2 [Benincasa hispida]2.66e-0881.4Show/hide
Query:  NRTEGSA---AGKEDNRRMSNAERSAYFARREAAKILRRVLEG
        NRT+ SA   AGK +NRRMSNA+RSAYFARREAAKILRRVLEG
Subjt:  NRTEGSA---AGKEDNRRMSNAERSAYFARREAAKILRRVLEG

XP_038898181.1 28S rRNA (cytosine-C(5))-methyltransferase-like isoform X4 [Benincasa hispida]2.68e-0881.4Show/hide
Query:  NRTEGSA---AGKEDNRRMSNAERSAYFARREAAKILRRVLEG
        NRT+ SA   AGK +NRRMSNA+RSAYFARREAAKILRRVLEG
Subjt:  NRTEGSA---AGKEDNRRMSNAERSAYFARREAAKILRRVLEG

TrEMBL top hitse value%identityAlignment
A0A0A0L2U2 SAM_MT_RSMB_NOP domain-containing protein1.14e-0776.74Show/hide
Query:  NRTEGSA---AGKEDNRRMSNAERSAYFARREAAKILRRVLEG
        NRT+ SA   AGK + RRMSNA+RSAYFARREAAK+LRRVLEG
Subjt:  NRTEGSA---AGKEDNRRMSNAERSAYFARREAAKILRRVLEG

A0A1S3BVF0 probable 28S rRNA (Cytosine-C(5))-methyltransferase isoform X27.27e-0776.74Show/hide
Query:  NRTEGS---AAGKEDNRRMSNAERSAYFARREAAKILRRVLEG
        NRT+ S   AA K +NR+MSNA+RSAYFARREAAKILRRVLEG
Subjt:  NRTEGS---AAGKEDNRRMSNAERSAYFARREAAKILRRVLEG

A0A6J1C0F2 probable 28S rRNA (Cytosine-C(5))-methyltransferase2.87e-0779.07Show/hide
Query:  NRTEGSA---AGKEDNRRMSNAERSAYFARREAAKILRRVLEG
        NRT  SA   AGK D RR+SNA RSAYFARREAAKILRRVLEG
Subjt:  NRTEGSA---AGKEDNRRMSNAERSAYFARREAAKILRRVLEG

A0A6J1F919 probable 28S rRNA (Cytosine-C(5))-methyltransferase3.92e-0787.88Show/hide
Query:  AGKEDNRRMSNAERSAYFARREAAKILRRVLEG
        AGK ++RRMSNA+RSAYFARREAAKILRRVLEG
Subjt:  AGKEDNRRMSNAERSAYFARREAAKILRRVLEG

A0A6J1IIH7 probable 28S rRNA (Cytosine-C(5))-methyltransferase3.92e-0787.88Show/hide
Query:  AGKEDNRRMSNAERSAYFARREAAKILRRVLEG
        AGK ++RRMSNA+RSAYFARREAAKILRRVLEG
Subjt:  AGKEDNRRMSNAERSAYFARREAAKILRRVLEG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGTGCGGCATCAACAGAACCGAAGGATCGGCTGCCGGAAAAGAAGATAACAGGCGGATGAGCAACGCGGAGCGTTCGGCATATTTCGCGAGGAGAGAGGCG
GCGAAGATATTGCGGCGAGTTCTTGAAGGATCAACGTCGAGCTATCGCTTCAATCAAAGGTGTTTCTCTTGCAGCGAGATAAAGTCTGTCTTGACTTTTGTTCTT
GGCAGTGATTTACATGATCATCCTCTGGTTGCGAAAATGGGAGCATCTTCATGCAACGGCGTGGTCTCCCAATTTTTGCAGGCGGTAAGTATCAACACATTGGTT
CGGTTTATCTGTAGGAACCAGTGGGATTCTTCAGCATCTCCGCCCAGGTTAGTCGAAATTACAATTCTTGCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGGTGCGGCATCAACAGAACCGAAGGATCGGCTGCCGGAAAAGAAGATAACAGGCGGATGAGCAACGCGGAGCGTTCGGCATATTTCGCGAGGAGAGAGGCG
GCGAAGATATTGCGGCGAGTTCTTGAAGGATCAACGTCGAGCTATCGCTTCAATCAAAGGTGTTTCTCTTGCAGCGAGATAAAGTCTGTCTTGACTTTTGTTCTT
GGCAGTGATTTACATGATCATCCTCTGGTTGCGAAAATGGGAGCATCTTCATGCAACGGCGTGGTCTCCCAATTTTTGCAGGCGGTAAGTATCAACACATTGGTT
CGGTTTATCTGTAGGAACCAGTGGGATTCTTCAGCATCTCCGCCCAGGTTAGTCGAAATTACAATTCTTGCCTAG
Protein sequenceShow/hide protein sequence
MRCGINRTEGSAAGKEDNRRMSNAERSAYFARREAAKILRRVLEGSTSSYRFNQRCFSCSEIKSVLTFVLGSDLHDHPLVAKMGASSCNGVVSQFLQAVSINTLV
RFICRNQWDSSASPPRLVEITILA