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Csor.00g089190 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g089190
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionWD repeat containing protein
Genome locationCsor_Chr11:3378458..3380961
RNA-Seq ExpressionCsor.00g089190
SyntenyCsor.00g089190
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588036.1 hypothetical protein SDJN03_16601, partial [Cucurbita argyrosperma subsp. sororia]1.23e-84100Show/hide
Query:  MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENDEAEKDLGQLENDGIEKCSDSEIMEIPSTFMVDTTGIVTEN
        MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENDEAEKDLGQLENDGIEKCSDSEIMEIPSTFMVDTTGIVTEN
Subjt:  MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENDEAEKDLGQLENDGIEKCSDSEIMEIPSTFMVDTTGIVTEN

Query:  ISEDQHQKPFHWIVDGWREKTGSSKK
        ISEDQHQKPFHWIVDGWREKTGSSKK
Subjt:  ISEDQHQKPFHWIVDGWREKTGSSKK

XP_004135711.1 uncharacterized protein LOC101210247 isoform X1 [Cucumis sativus]4.59e-4465.35Show/hide
Query:  MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENDEAEKDLGQLENDGIEKCSDSEIM-EIPSTFMVDTTGIVTE
        M DPRA L S SS   LPPND LP+RFKV+WRVLLISNFALSAYMFASARK+               QLEND +EK SDSEI+ EIPST MVDTTGIVTE
Subjt:  MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENDEAEKDLGQLENDGIEKCSDSEIM-EIPSTFMVDTTGIVTE

Query:  NISEDQHQKPFHWIVDGWREKTGSSKK
        N+ EDQ Q+P   +V GWREK G S+K
Subjt:  NISEDQHQKPFHWIVDGWREKTGSSKK

XP_022926648.1 uncharacterized protein LOC111433716 [Cucurbita moschata]2.39e-8298.41Show/hide
Query:  MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENDEAEKDLGQLENDGIEKCSDSEIMEIPSTFMVDTTGIVTEN
        MADPRASLSSLSSPPSL PNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMEN+EAEKDLGQLENDGIEKCSDSEIMEIPSTFMVDTTGIVTEN
Subjt:  MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENDEAEKDLGQLENDGIEKCSDSEIMEIPSTFMVDTTGIVTEN

Query:  ISEDQHQKPFHWIVDGWREKTGSSKK
        ISEDQHQKPFHWIVDGWREKTGSSKK
Subjt:  ISEDQHQKPFHWIVDGWREKTGSSKK

XP_022968528.1 uncharacterized protein LOC111467730 isoform X1 [Cucurbita maxima]4.13e-8398.41Show/hide
Query:  MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENDEAEKDLGQLENDGIEKCSDSEIMEIPSTFMVDTTGIVTEN
        MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQME+DEAEKDLGQLENDGIEKCSDSEIMEIPSTFMVDTTGIVTEN
Subjt:  MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENDEAEKDLGQLENDGIEKCSDSEIMEIPSTFMVDTTGIVTEN

Query:  ISEDQHQKPFHWIVDGWREKTGSSKK
        I EDQHQKPFHWIVDGWREKTGSSKK
Subjt:  ISEDQHQKPFHWIVDGWREKTGSSKK

XP_023530326.1 uncharacterized protein LOC111792930 [Cucurbita pepo subsp. pepo]1.01e-8399.21Show/hide
Query:  MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENDEAEKDLGQLENDGIEKCSDSEIMEIPSTFMVDTTGIVTEN
        MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENDEAEKDLGQLENDGIEKCSDSEIMEIPST MVDTTGIVTEN
Subjt:  MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENDEAEKDLGQLENDGIEKCSDSEIMEIPSTFMVDTTGIVTEN

Query:  ISEDQHQKPFHWIVDGWREKTGSSKK
        ISEDQHQKPFHWIVDGWREKTGSSKK
Subjt:  ISEDQHQKPFHWIVDGWREKTGSSKK

TrEMBL top hitse value%identityAlignment
A0A0A0M1X9 Uncharacterized protein2.22e-4465.35Show/hide
Query:  MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENDEAEKDLGQLENDGIEKCSDSEIM-EIPSTFMVDTTGIVTE
        M DPRA L S SS   LPPND LP+RFKV+WRVLLISNFALSAYMFASARK+               QLEND +EK SDSEI+ EIPST MVDTTGIVTE
Subjt:  MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENDEAEKDLGQLENDGIEKCSDSEIM-EIPSTFMVDTTGIVTE

Query:  NISEDQHQKPFHWIVDGWREKTGSSKK
        N+ EDQ Q+P   +V GWREK G S+K
Subjt:  NISEDQHQKPFHWIVDGWREKTGSSKK

A0A1S3BR82 uncharacterized protein LOC1034923201.42e-4062.6Show/hide
Query:  RASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENDEAEKDLGQLENDGIEKCSDSEIM-EIPSTFMVDTTGIVTENISE
        R  L S SS   LPPND LP+RFKV+WR+LLISNFALSAYMFASARK+               +LEND +EK SDSEI+ EIPST MVDTTGIVTEN+ E
Subjt:  RASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENDEAEKDLGQLENDGIEKCSDSEIM-EIPSTFMVDTTGIVTENISE

Query:  DQHQKPFHWIVDGWREKTGSSKK
        DQ Q+P   +V GWREK G S+K
Subjt:  DQHQKPFHWIVDGWREKTGSSKK

A0A6J1D315 uncharacterized protein LOC1110165444.16e-3864.35Show/hide
Query:  MADPRASLSSLSSPPS-LPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENDEAEKDLGQLENDGIEKCSDSEIM-EIPSTFMVDTTGIVT
        M DPRA L S SSPP  LPPND LPRRFKV+WRVLLISNFAL+AYMFA+ARKKDLG+ME D             +EK SD E+M  IPST MVDTT I  
Subjt:  MADPRASLSSLSSPPS-LPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENDEAEKDLGQLENDGIEKCSDSEIM-EIPSTFMVDTTGIVT

Query:  ENISEDQHQKPFHWI
        ENISED  ++PF W+
Subjt:  ENISEDQHQKPFHWI

A0A6J1EIP0 uncharacterized protein LOC1114337161.16e-8298.41Show/hide
Query:  MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENDEAEKDLGQLENDGIEKCSDSEIMEIPSTFMVDTTGIVTEN
        MADPRASLSSLSSPPSL PNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMEN+EAEKDLGQLENDGIEKCSDSEIMEIPSTFMVDTTGIVTEN
Subjt:  MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENDEAEKDLGQLENDGIEKCSDSEIMEIPSTFMVDTTGIVTEN

Query:  ISEDQHQKPFHWIVDGWREKTGSSKK
        ISEDQHQKPFHWIVDGWREKTGSSKK
Subjt:  ISEDQHQKPFHWIVDGWREKTGSSKK

A0A6J1HYA0 uncharacterized protein LOC111467730 isoform X12.00e-8398.41Show/hide
Query:  MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENDEAEKDLGQLENDGIEKCSDSEIMEIPSTFMVDTTGIVTEN
        MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQME+DEAEKDLGQLENDGIEKCSDSEIMEIPSTFMVDTTGIVTEN
Subjt:  MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENDEAEKDLGQLENDGIEKCSDSEIMEIPSTFMVDTTGIVTEN

Query:  ISEDQHQKPFHWIVDGWREKTGSSKK
        I EDQHQKPFHWIVDGWREKTGSSKK
Subjt:  ISEDQHQKPFHWIVDGWREKTGSSKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGACCCACGAGCATCACTGTCATCTCTATCTTCACCGCCGTCTTTGCCTCCCAATGATCAGCTACCCAGACGCTTCAAGGTCGTCTGGCGCGTTCTACTGATCTC
CAATTTCGCCCTTTCAGCCTACATGTTTGCAAGTGCAAGGAAGAAAGACTTGGGGCAAATGGAGAATGATGAAGCAGAAAAAGATTTGGGTCAACTGGAAAATGATGGAA
TAGAAAAATGCAGTGATAGTGAAATAATGGAAATACCCTCAACGTTTATGGTGGATACCACTGGCATAGTTACAGAGAACATCTCGGAAGATCAGCACCAAAAACCATTC
CACTGGATTGTCGATGGTTGGAGAGAAAAAACAGGTTCGAGTAAAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGACCCACGAGCATCACTGTCATCTCTATCTTCACCGCCGTCTTTGCCTCCCAATGATCAGCTACCCAGACGCTTCAAGGTCGTCTGGCGCGTTCTACTGATCTC
CAATTTCGCCCTTTCAGCCTACATGTTTGCAAGTGCAAGGAAGAAAGACTTGGGGCAAATGGAGAATGATGAAGCAGAAAAAGATTTGGGTCAACTGGAAAATGATGGAA
TAGAAAAATGCAGTGATAGTGAAATAATGGAAATACCCTCAACGTTTATGGTGGATACCACTGGCATAGTTACAGAGAACATCTCGGAAGATCAGCACCAAAAACCATTC
CACTGGATTGTCGATGGTTGGAGAGAAAAAACAGGTTCGAGTAAAAAATGA
Protein sequenceShow/hide protein sequence
MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENDEAEKDLGQLENDGIEKCSDSEIMEIPSTFMVDTTGIVTENISEDQHQKPF
HWIVDGWREKTGSSKK