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Csor.00g100770 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g100770
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionFerroxidase
Genome locationCsor_Chr20:2832765..2836336
RNA-Seq ExpressionCsor.00g100770
SyntenyCsor.00g100770
Gene Ontology termsGO:0016226 - iron-sulfur cluster assembly (biological process)
GO:0055072 - iron ion homeostasis (biological process)
GO:1901564 - organonitrogen compound metabolic process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0008199 - ferric iron binding (molecular function)
GO:0016491 - oxidoreductase activity (molecular function)
InterPro domainsIPR002908 - Frataxin/CyaY
IPR020895 - Frataxin conserved site
IPR036524 - Frataxin/CyaY superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570859.1 hypothetical protein SDJN03_29774, partial [Cucurbita argyrosperma subsp. sororia]3.68e-94100Show/hide
Query:  MTTKLLPRRKLSRILMLPWSSSSSSSFTSALALWIFIGDDSRGPATIDYRKTLGEIRNLEKKRKFGLQEQLEEYGDNLRISGFNVDFGVMTLRLGDLGTY
        MTTKLLPRRKLSRILMLPWSSSSSSSFTSALALWIFIGDDSRGPATIDYRKTLGEIRNLEKKRKFGLQEQLEEYGDNLRISGFNVDFGVMTLRLGDLGTY
Subjt:  MTTKLLPRRKLSRILMLPWSSSSSSSFTSALALWIFIGDDSRGPATIDYRKTLGEIRNLEKKRKFGLQEQLEEYGDNLRISGFNVDFGVMTLRLGDLGTY

Query:  VLNKQTPNRQIWLSSPLRLSWRMFTTPNNSDLRGKNFS
        VLNKQTPNRQIWLSSPLRLSWRMFTTPNNSDLRGKNFS
Subjt:  VLNKQTPNRQIWLSSPLRLSWRMFTTPNNSDLRGKNFS

KAG6604827.1 Frataxin, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]1.01e-3352.17Show/hide
Query:  MTTKLLPRRKLSRILMLP--WSSSSSSSFTSALALWI------------------------------FIGDDSRGPATIDYRKTL--GEIRNLEKKRKFG
        M TKLLP RKLSRIL +P   SSSSSSSF     L                                F+GDDSRGPATIDY   +  GE   L      G
Subjt:  MTTKLLPRRKLSRILMLP--WSSSSSSSFTSALALWI------------------------------FIGDDSRGPATIDYRKTL--GEIRNLEKKRKFG

Query:  LQEQLEEYGDNLRISGFNVDFG--VMTLRLGDLGTYVLNKQTPNRQIWLSSPL----RLSW
        LQE+LEEYGD+L+I GF+VD+G  V+TLRLG LGTYVLNKQTPNRQIWLSSP+    R  W
Subjt:  LQEQLEEYGDNLRISGFNVDFG--VMTLRLGDLGTYVLNKQTPNRQIWLSSPL----RLSW

XP_022947402.1 frataxin, mitochondrial [Cucurbita moschata]4.74e-3452.17Show/hide
Query:  MTTKLLPRRKLSRILMLP--WSSSSSSSFTSALALWI------------------------------FIGDDSRGPATIDYRKTL--GEIRNLEKKRKFG
        M TKLLP RKLSRIL +P   SSSSSSSF     L                                F+GDDSRGPATIDY   +  GE   L      G
Subjt:  MTTKLLPRRKLSRILMLP--WSSSSSSSFTSALALWI------------------------------FIGDDSRGPATIDYRKTL--GEIRNLEKKRKFG

Query:  LQEQLEEYGDNLRISGFNVDFG--VMTLRLGDLGTYVLNKQTPNRQIWLSSPL----RLSW
        LQE+LEEYGD+L+I GF+VD+G  V+TLRLG LGTYVLNKQTPNRQIWLSSP+    R  W
Subjt:  LQEQLEEYGDNLRISGFNVDFG--VMTLRLGDLGTYVLNKQTPNRQIWLSSPL----RLSW

XP_022971111.1 frataxin, mitochondrial [Cucurbita maxima]2.94e-3552.8Show/hide
Query:  MTTKLLPRRKLSRILMLP--WSSSSSSSFTSALALWI------------------------------FIGDDSRGPATIDYRKTL--GEIRNLEKKRKFG
        M TKLLP RKLSRIL +P   SSSSSSSF     L                                F+GDDSRGPATIDY   +  GE   L      G
Subjt:  MTTKLLPRRKLSRILMLP--WSSSSSSSFTSALALWI------------------------------FIGDDSRGPATIDYRKTL--GEIRNLEKKRKFG

Query:  LQEQLEEYGDNLRISGFNVDFG--VMTLRLGDLGTYVLNKQTPNRQIWLSSPL----RLSW
        LQE+LEEYGD+L+I GF+VD+G  V+TLRLGDLGTYVLNKQTPNRQIWLSSP+    R  W
Subjt:  LQEQLEEYGDNLRISGFNVDFG--VMTLRLGDLGTYVLNKQTPNRQIWLSSPL----RLSW

XP_023533562.1 frataxin, mitochondrial isoform X2 [Cucurbita pepo subsp. pepo]1.67e-3453.95Show/hide
Query:  MTTKLLPRRKLSRILMLP--WSSSSSSSFTSALALWI------------------------------FIGDDSRGPATIDYRKTL--GEIRNLEKKRKFG
        M TKLLP RKLSRIL +P   SSSSSSSF     L                                F+GDDSRGPATIDY   +  GE   L      G
Subjt:  MTTKLLPRRKLSRILMLP--WSSSSSSSFTSALALWI------------------------------FIGDDSRGPATIDYRKTL--GEIRNLEKKRKFG

Query:  LQEQLEEYGDNLRISGFNVDFG--VMTLRLGDLGTYVLNKQTPNRQIWLSSP
        LQE+LEE+GD+L+I GF+VD+G  V+TLRLGDLGTYVLNKQTPNRQIWLSSP
Subjt:  LQEQLEEYGDNLRISGFNVDFG--VMTLRLGDLGTYVLNKQTPNRQIWLSSP

TrEMBL top hitse value%identityAlignment
A0A0A0KAC6 Ferroxidase1.07e-3253.25Show/hide
Query:  KLLPRRKLSRILMLP-WSSSSSSSF-----TSALALWIF----------------------IGDDSRGPATIDYRKTL--GEIRNLEKKRKFGLQEQLEE
        KLLP RKLSRIL LP +SS S   F      S+  + IF                      +GDDSRGPATIDY   +  GE   L      GLQE+LEE
Subjt:  KLLPRRKLSRILMLP-WSSSSSSSF-----TSALALWIF----------------------IGDDSRGPATIDYRKTL--GEIRNLEKKRKFGLQEQLEE

Query:  YGDNLRISGFNVDFG--VMTLRLGDLGTYVLNKQTPNRQIWLSSPL----RLSW
        YGDNL+I GF+VD+G  V+TLRLG+LGTYVLNKQTPNRQIWLSSPL    R  W
Subjt:  YGDNLRISGFNVDFG--VMTLRLGDLGTYVLNKQTPNRQIWLSSPL----RLSW

A0A1S3BJ48 Ferroxidase1.17e-3352.23Show/hide
Query:  MTTKLLPRRKLSRILMLPWSSSSS--------------------------SSFTSALAL--WIFIGDDSRGPATIDYRKTL--GEIRNLEKKRKFGLQEQ
        M TKLLP  KLSRIL LP SSS S                           SF+ +        +GDDSRGPATIDY   +  GE   L      GLQE+
Subjt:  MTTKLLPRRKLSRILMLPWSSSSS--------------------------SSFTSALAL--WIFIGDDSRGPATIDYRKTL--GEIRNLEKKRKFGLQEQ

Query:  LEEYGDNLRISGFNVDFG--VMTLRLGDLGTYVLNKQTPNRQIWLSSPL----RLSW
        LEEYGDNL+I GF+VD+G  V+TLRLG+LGTYVLNKQTPNRQIWLSSPL    R  W
Subjt:  LEEYGDNLRISGFNVDFG--VMTLRLGDLGTYVLNKQTPNRQIWLSSPL----RLSW

A0A6J1CG34 Ferroxidase1.44e-3249.38Show/hide
Query:  MTTKLLPRRKLSRILMLPWSSSSSS-----------------------------SFTSALAL--WIFIGDDSRGPATIDYRKTL--GEIRNLEKKRKFGL
        M TKLLP RKLSRIL +P SSS SS                             SF+ +       F+ DDSRGPA+IDY   +  G+   L      GL
Subjt:  MTTKLLPRRKLSRILMLPWSSSSSS-----------------------------SFTSALAL--WIFIGDDSRGPATIDYRKTL--GEIRNLEKKRKFGL

Query:  QEQLEEYGDNLRISGFNVDFG--VMTLRLGDLGTYVLNKQTPNRQIWLSSPL----RLSW
        QE+LEEYGD+L+I GF+VD+G  V+TL+LGDLGTYVLNKQTPNRQIWLSSP+    R  W
Subjt:  QEQLEEYGDNLRISGFNVDFG--VMTLRLGDLGTYVLNKQTPNRQIWLSSPL----RLSW

A0A6J1G6C8 Ferroxidase2.30e-3452.17Show/hide
Query:  MTTKLLPRRKLSRILMLP--WSSSSSSSFTSALALWI------------------------------FIGDDSRGPATIDYRKTL--GEIRNLEKKRKFG
        M TKLLP RKLSRIL +P   SSSSSSSF     L                                F+GDDSRGPATIDY   +  GE   L      G
Subjt:  MTTKLLPRRKLSRILMLP--WSSSSSSSFTSALALWI------------------------------FIGDDSRGPATIDYRKTL--GEIRNLEKKRKFG

Query:  LQEQLEEYGDNLRISGFNVDFG--VMTLRLGDLGTYVLNKQTPNRQIWLSSPL----RLSW
        LQE+LEEYGD+L+I GF+VD+G  V+TLRLG LGTYVLNKQTPNRQIWLSSP+    R  W
Subjt:  LQEQLEEYGDNLRISGFNVDFG--VMTLRLGDLGTYVLNKQTPNRQIWLSSPL----RLSW

A0A6J1I2E7 Ferroxidase1.42e-3552.8Show/hide
Query:  MTTKLLPRRKLSRILMLP--WSSSSSSSFTSALALWI------------------------------FIGDDSRGPATIDYRKTL--GEIRNLEKKRKFG
        M TKLLP RKLSRIL +P   SSSSSSSF     L                                F+GDDSRGPATIDY   +  GE   L      G
Subjt:  MTTKLLPRRKLSRILMLP--WSSSSSSSFTSALALWI------------------------------FIGDDSRGPATIDYRKTL--GEIRNLEKKRKFG

Query:  LQEQLEEYGDNLRISGFNVDFG--VMTLRLGDLGTYVLNKQTPNRQIWLSSPL----RLSW
        LQE+LEEYGD+L+I GF+VD+G  V+TLRLGDLGTYVLNKQTPNRQIWLSSP+    R  W
Subjt:  LQEQLEEYGDNLRISGFNVDFG--VMTLRLGDLGTYVLNKQTPNRQIWLSSPL----RLSW

SwissProt top hitse value%identityAlignment
O35943 Frataxin, mitochondrial1.0e-0840.2Show/hide
Query:  RGPATIDYRKTLGE--IRNLEKKRKFGLQEQLEEYGDN-LRISGFNVDF--GVMTLRL-GDLGTYVLNKQTPNRQIWLSSPLRLSWRMFTTPNNSDLRGK
        R   T+D   +L E     L ++    L E  E+  D    +  ++V F  GV+T++L GDLGTYV+NKQTPN+QIWLSSP        + P   D  GK
Subjt:  RGPATIDYRKTLGE--IRNLEKKRKFGLQEQLEEYGDN-LRISGFNVDF--GVMTLRL-GDLGTYVLNKQTPNRQIWLSSPLRLSWRMFTTPNNSDLRGK

Query:  NF
        N+
Subjt:  NF

Q05B87 Frataxin, mitochondrial2.6e-0745.33Show/hide
Query:  LQEQLEEYGDN-LRISGFNVDF--GVMTLRL-GDLGTYVLNKQTPNRQIWLSSPLRLSWRMFTTPNNSDLRGKNF
        L E  E+  D       ++V F  GV+T++L GDLGTYV+NKQTPN+QIWLSSP        + P   D  G+N+
Subjt:  LQEQLEEYGDN-LRISGFNVDF--GVMTLRL-GDLGTYVLNKQTPNRQIWLSSPLRLSWRMFTTPNNSDLRGKNF

Q16595 Frataxin, mitochondrial1.1e-0746.67Show/hide
Query:  LQEQLEEYGDN-LRISGFNVDF--GVMTLRL-GDLGTYVLNKQTPNRQIWLSSPLRLSWRMFTTPNNSDLRGKNF
        L E  E+  D       ++V F  GV+T++L GDLGTYV+NKQTPN+QIWLSSP        + P   D  GKN+
Subjt:  LQEQLEEYGDN-LRISGFNVDF--GVMTLRL-GDLGTYVLNKQTPNRQIWLSSPLRLSWRMFTTPNNSDLRGKNF

Q8HXX9 Frataxin, mitochondrial1.1e-0746.67Show/hide
Query:  LQEQLEEYGDN-LRISGFNVDF--GVMTLRL-GDLGTYVLNKQTPNRQIWLSSPLRLSWRMFTTPNNSDLRGKNF
        L E  E+  D       ++V F  GV+T++L GDLGTYV+NKQTPN+QIWLSSP        + P   D  GKN+
Subjt:  LQEQLEEYGDN-LRISGFNVDF--GVMTLRL-GDLGTYVLNKQTPNRQIWLSSPLRLSWRMFTTPNNSDLRGKNF

Q9ZR07 Frataxin, mitochondrial3.2e-1853.33Show/hide
Query:  SRGPATIDYRKTLGEIRNLEKKRKF---GLQEQLEEYGDNLRISGFNVDFG--VMTLRLGDLGTYVLNKQTPNRQIWLSSPL----RLSW
        S+GPA++DY   L E     K   F    L E++E+YGDN++I GF++D+G  V+TL+LG LGTYVLNKQTPNRQIW+SSP+    R  W
Subjt:  SRGPATIDYRKTLGEIRNLEKKRKF---GLQEQLEEYGDNLRISGFNVDFG--VMTLRLGDLGTYVLNKQTPNRQIWLSSPL----RLSW

Arabidopsis top hitse value%identityAlignment
AT4G03240.1 frataxin homolog2.3e-1953.33Show/hide
Query:  SRGPATIDYRKTLGEIRNLEKKRKF---GLQEQLEEYGDNLRISGFNVDFG--VMTLRLGDLGTYVLNKQTPNRQIWLSSPL----RLSW
        S+GPA++DY   L E     K   F    L E++E+YGDN++I GF++D+G  V+TL+LG LGTYVLNKQTPNRQIW+SSP+    R  W
Subjt:  SRGPATIDYRKTLGEIRNLEKKRKF---GLQEQLEEYGDNLRISGFNVDFG--VMTLRLGDLGTYVLNKQTPNRQIWLSSPL----RLSW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTACCAAGCTGCTTCCCCGGCGTAAGCTTTCAAGGATACTAATGTTGCCGTGGTCGTCTTCGTCTTCTTCCTCTTTCACTTCTGCTCTTGCCCTCTGGATTTTCAT
CGGCGATGATTCTCGAGGCCCTGCCACCATTGATTATAGAAAAACTTTGGGCGAGATTCGAAATCTTGAAAAGAAACGGAAGTTCGGACTGCAAGAGCAATTAGAGGAAT
ATGGTGATAATCTCCGAATTAGTGGCTTTAACGTGGACTTTGGGGTAATGACCTTAAGACTTGGGGATCTTGGCACTTACGTCTTGAACAAACAAACGCCAAACAGACAA
ATTTGGCTATCTTCCCCTTTGAGGCTATCTTGGAGAATGTTTACAACCCCCAATAATAGCGATTTAAGAGGTAAGAACTTTAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTACCAAGCTGCTTCCCCGGCGTAAGCTTTCAAGGATACTAATGTTGCCGTGGTCGTCTTCGTCTTCTTCCTCTTTCACTTCTGCTCTTGCCCTCTGGATTTTCAT
CGGCGATGATTCTCGAGGCCCTGCCACCATTGATTATAGAAAAACTTTGGGCGAGATTCGAAATCTTGAAAAGAAACGGAAGTTCGGACTGCAAGAGCAATTAGAGGAAT
ATGGTGATAATCTCCGAATTAGTGGCTTTAACGTGGACTTTGGGGTAATGACCTTAAGACTTGGGGATCTTGGCACTTACGTCTTGAACAAACAAACGCCAAACAGACAA
ATTTGGCTATCTTCCCCTTTGAGGCTATCTTGGAGAATGTTTACAACCCCCAATAATAGCGATTTAAGAGGTAAGAACTTTAGTTGA
Protein sequenceShow/hide protein sequence
MTTKLLPRRKLSRILMLPWSSSSSSSFTSALALWIFIGDDSRGPATIDYRKTLGEIRNLEKKRKFGLQEQLEEYGDNLRISGFNVDFGVMTLRLGDLGTYVLNKQTPNRQ
IWLSSPLRLSWRMFTTPNNSDLRGKNFS