; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Csor.00g101100 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g101100
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionSerine/arginine repetitive matrix protein 1-like
Genome locationCsor_Chr20:2621510..2622133
RNA-Seq ExpressionCsor.00g101100
SyntenyCsor.00g101100
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR007592 - GLABROUS1 enhancer-binding protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037301.1 serine/arginine repetitive matrix protein 1-like [Cucumis melo var. makuwa]4.54e-9267.11Show/hide
Query:  MSTPHRFPPSNASPETLT---------------HFSEEDELNLLNCYLQIARSANPTSNSQPTLDSPALDRIETALRPKFTYSHIADKLHRLKLQYHKLA
        MSTPHR  PSNASPETLT               HF++EDE+NLL  YLQI+RS NPT NS PTLDSPA DR++TA+ PKF++S IADKLHRLKL YHK A
Subjt:  MSTPHRFPPSNASPETLT---------------HFSEEDELNLLNCYLQIARSANPTSNSQPTLDSPALDRIETALRPKFTYSHIADKLHRLKLQYHKLA

Query:  RTKSLIKTPHHRRILEIGRSIWGKPPTSRT-KPQAIL--RAIPRRIKQRSGSSKKGV----DLNDFPVLLSEFSRRFPGNGVWKEGLRGMEEKSLRDMNE
        RTKS IKTPH R+IL++GRSIWGK PT  T KPQ I   R + RRIKQRS + K+GV    DL +FPVL++EFS++FPGNGVW+EGLR MEEK+L+DMNE
Subjt:  RTKSLIKTPHHRRILEIGRSIWGKPPTSRT-KPQAIL--RAIPRRIKQRSGSSKKGV----DLNDFPVLLSEFSRRFPGNGVWKEGLRGMEEKSLRDMNE

Query:  KWVLLHIEEAELKARRAALLQKQLR
        KWVLLHIE AELKARRAALL++QL+
Subjt:  KWVLLHIEEAELKARRAALLQKQLR

KAG6570827.1 hypothetical protein SDJN03_29742, partial [Cucurbita argyrosperma subsp. sororia]1.19e-144100Show/hide
Query:  MSTPHRFPPSNASPETLTHFSEEDELNLLNCYLQIARSANPTSNSQPTLDSPALDRIETALRPKFTYSHIADKLHRLKLQYHKLARTKSLIKTPHHRRIL
        MSTPHRFPPSNASPETLTHFSEEDELNLLNCYLQIARSANPTSNSQPTLDSPALDRIETALRPKFTYSHIADKLHRLKLQYHKLARTKSLIKTPHHRRIL
Subjt:  MSTPHRFPPSNASPETLTHFSEEDELNLLNCYLQIARSANPTSNSQPTLDSPALDRIETALRPKFTYSHIADKLHRLKLQYHKLARTKSLIKTPHHRRIL

Query:  EIGRSIWGKPPTSRTKPQAILRAIPRRIKQRSGSSKKGVDLNDFPVLLSEFSRRFPGNGVWKEGLRGMEEKSLRDMNEKWVLLHIEEAELKARRAALLQK
        EIGRSIWGKPPTSRTKPQAILRAIPRRIKQRSGSSKKGVDLNDFPVLLSEFSRRFPGNGVWKEGLRGMEEKSLRDMNEKWVLLHIEEAELKARRAALLQK
Subjt:  EIGRSIWGKPPTSRTKPQAILRAIPRRIKQRSGSSKKGVDLNDFPVLLSEFSRRFPGNGVWKEGLRGMEEKSLRDMNEKWVLLHIEEAELKARRAALLQK

Query:  QLRLADF
        QLRLADF
Subjt:  QLRLADF

KAG6606028.1 hypothetical protein SDJN03_03345, partial [Cucurbita argyrosperma subsp. sororia]2.47e-9168.81Show/hide
Query:  MSTPHRFPPS-------NASPETLT---------HFSEEDELNLLNCYLQIARSANPTSNSQPTLDSPALDRIETALRPKFTYSHIADKLHRLKLQYHKL
        MSTP R PPS       +A+PE LT         HF++EDEL+LLNCYL++A S     NSQPTLDSPALDRI TAL  KF +SHIADKLHRLK+QYHK 
Subjt:  MSTPHRFPPS-------NASPETLT---------HFSEEDELNLLNCYLQIARSANPTSNSQPTLDSPALDRIETALRPKFTYSHIADKLHRLKLQYHKL

Query:  ARTKSLIKTPHHRRILEIGRSIWGKPPTSRTKPQAILRAIPRRIKQRSGSSKKGVDLNDFPVLLSEFSRRFPGNGVWKEGLRGMEEKSLRDMNEKWVLLH
        ARTKS IKTPHH RILEIGRSIWGKP   RTKPQ I     RRI+ RS + KKGVDL +FPVL+SEFSR+FPGNGVW+EGL+GMEE SL+ MNEKWVLLH
Subjt:  ARTKSLIKTPHHRRILEIGRSIWGKPPTSRTKPQAILRAIPRRIKQRSGSSKKGVDLNDFPVLLSEFSRRFPGNGVWKEGLRGMEEKSLRDMNEKWVLLH

Query:  IEEAELKARRAALLQKQL
        IEEAELKARR AL+Q+Q+
Subjt:  IEEAELKARRAALLQKQL

KGN46890.1 hypothetical protein Csa_020607 [Cucumis sativus]1.78e-9167.57Show/hide
Query:  MSTPHRFPPSNASPETLT---------HFSEEDELNLLNCYLQIARSANPTSNSQPTLDSPALDRIETALRPKFTYSHIADKLHRLKLQYHKLARTKSLI
        MST HR PPS+ASPETLT         HF++EDE+NLLN YLQI+RS NPT NS PTLDS A DR++TA+ PKF++S IADKLHRLKL YHK ARTKS I
Subjt:  MSTPHRFPPSNASPETLT---------HFSEEDELNLLNCYLQIARSANPTSNSQPTLDSPALDRIETALRPKFTYSHIADKLHRLKLQYHKLARTKSLI

Query:  KTPHHRRILEIGRSIWGKPPTSRT-KPQAIL--RAIPRRIKQRSGSSKKGV----DLNDFPVLLSEFSRRFPGNGVWKEGLRGMEEKSLRDMNEKWVLLH
        KTPH R+IL++GRSIWGK PT  T KPQ I   R + RRIKQRS + K+GV    DL +FPVL++EFSR+FPGNGVW++GLR M EK+L+DMNEKWVLLH
Subjt:  KTPHHRRILEIGRSIWGKPPTSRT-KPQAIL--RAIPRRIKQRSGSSKKGV----DLNDFPVLLSEFSRRFPGNGVWKEGLRGMEEKSLRDMNEKWVLLH

Query:  IEEAELKARRAALLQKQLRLAD
        IE AELKARRAALL++QLR  +
Subjt:  IEEAELKARRAALLQKQLRLAD

XP_022756636.1 probable transcription factor At1g61730 [Durio zibethinus]2.54e-4041.67Show/hide
Query:  MSTPHRFPPSNASPETLTHFSEEDELNLLNCYLQIARSANPTSNSQPTLDSPALDRIETALRPKFTYSHIADKLHRLKLQYHKLARTKSLIKTPHHRRIL
        MSTP   P +  +  +   FSE DE  +L C ++  +S +P      T+ +P ++RI   L  +F+ S I DK+ RL+++YHK ARTKSL++T H RRI 
Subjt:  MSTPHRFPPSNASPETLTHFSEEDELNLLNCYLQIARSANPTSNSQPTLDSPALDRIETALRPKFTYSHIADKLHRLKLQYHKLARTKSLIKTPHHRRIL

Query:  EIGRSIWGKPPTSRTKPQAILRAIPRRIKQRSGSSK-KGV-DLNDFPVLLSEFSRRFPGNGVWKEGLRGMEEKSLRDMNEKWVLLHIEEAELKARRAALL
        ++ + IWGK  T            P++ K+R  S K  GV DL+ FP L++EFSR  P N VWKE ++G+EE+ L+ M+++WVL+ +EEA+L A++A L+
Subjt:  EIGRSIWGKPPTSRTKPQAILRAIPRRIKQRSGSSK-KGV-DLNDFPVLLSEFSRRFPGNGVWKEGLRGMEEKSLRDMNEKWVLLHIEEAELKARRAALL

Query:  QKQL
        QKQ+
Subjt:  QKQL

TrEMBL top hitse value%identityAlignment
A0A0A0KAX7 Uncharacterized protein8.62e-9267.57Show/hide
Query:  MSTPHRFPPSNASPETLT---------HFSEEDELNLLNCYLQIARSANPTSNSQPTLDSPALDRIETALRPKFTYSHIADKLHRLKLQYHKLARTKSLI
        MST HR PPS+ASPETLT         HF++EDE+NLLN YLQI+RS NPT NS PTLDS A DR++TA+ PKF++S IADKLHRLKL YHK ARTKS I
Subjt:  MSTPHRFPPSNASPETLT---------HFSEEDELNLLNCYLQIARSANPTSNSQPTLDSPALDRIETALRPKFTYSHIADKLHRLKLQYHKLARTKSLI

Query:  KTPHHRRILEIGRSIWGKPPTSRT-KPQAIL--RAIPRRIKQRSGSSKKGV----DLNDFPVLLSEFSRRFPGNGVWKEGLRGMEEKSLRDMNEKWVLLH
        KTPH R+IL++GRSIWGK PT  T KPQ I   R + RRIKQRS + K+GV    DL +FPVL++EFSR+FPGNGVW++GLR M EK+L+DMNEKWVLLH
Subjt:  KTPHHRRILEIGRSIWGKPPTSRT-KPQAIL--RAIPRRIKQRSGSSKKGV----DLNDFPVLLSEFSRRFPGNGVWKEGLRGMEEKSLRDMNEKWVLLH

Query:  IEEAELKARRAALLQKQLRLAD
        IE AELKARRAALL++QLR  +
Subjt:  IEEAELKARRAALLQKQLRLAD

A0A5A7T6T1 Serine/arginine repetitive matrix protein 1-like2.20e-9267.11Show/hide
Query:  MSTPHRFPPSNASPETLT---------------HFSEEDELNLLNCYLQIARSANPTSNSQPTLDSPALDRIETALRPKFTYSHIADKLHRLKLQYHKLA
        MSTPHR  PSNASPETLT               HF++EDE+NLL  YLQI+RS NPT NS PTLDSPA DR++TA+ PKF++S IADKLHRLKL YHK A
Subjt:  MSTPHRFPPSNASPETLT---------------HFSEEDELNLLNCYLQIARSANPTSNSQPTLDSPALDRIETALRPKFTYSHIADKLHRLKLQYHKLA

Query:  RTKSLIKTPHHRRILEIGRSIWGKPPTSRT-KPQAIL--RAIPRRIKQRSGSSKKGV----DLNDFPVLLSEFSRRFPGNGVWKEGLRGMEEKSLRDMNE
        RTKS IKTPH R+IL++GRSIWGK PT  T KPQ I   R + RRIKQRS + K+GV    DL +FPVL++EFS++FPGNGVW+EGLR MEEK+L+DMNE
Subjt:  RTKSLIKTPHHRRILEIGRSIWGKPPTSRT-KPQAIL--RAIPRRIKQRSGSSKKGV----DLNDFPVLLSEFSRRFPGNGVWKEGLRGMEEKSLRDMNE

Query:  KWVLLHIEEAELKARRAALLQKQLR
        KWVLLHIE AELKARRAALL++QL+
Subjt:  KWVLLHIEEAELKARRAALLQKQLR

A0A6A2Z6N0 Uncharacterized protein5.06e-4043.2Show/hide
Query:  MSTPHRFPPSNASPETLTH--FSEEDELNLLNCYLQIARSANPTSNSQPTLDSPALDRIETALRPKFTYSHIADKLHRLKLQYHKLARTKSLIKTPHHRR
        MSTP   PP+  +P   +   FSE DE+ +L C ++  +S +P      T+ +P ++RI   L  KF+ S I DKL RL+ +YHK AR KSL++T H RR
Subjt:  MSTPHRFPPSNASPETLTH--FSEEDELNLLNCYLQIARSANPTSNSQPTLDSPALDRIETALRPKFTYSHIADKLHRLKLQYHKLARTKSLIKTPHHRR

Query:  ILEIGRSIWGKPPTSRTKPQAILRAIPRRIKQRSGSSKK-GV-DLNDFPVLLSEFSRRFPGNGVWKEGLRGMEEKSLRDMNEKWVLLHIEEAELKARRAA
        I ++ + IWGK            + IPR+ K   GS K+ GV +L +F  L++EFSR  PGN VWKE + GM E  LR M+++WV L +EEA+L AR+A 
Subjt:  ILEIGRSIWGKPPTSRTKPQAILRAIPRRIKQRSGSSKK-GV-DLNDFPVLLSEFSRRFPGNGVWKEGLRGMEEKSLRDMNEKWVLLHIEEAELKARRAA

Query:  LLQKQL
        L+Q+Q+
Subjt:  LLQKQL

A0A6P5ZW34 probable transcription factor At1g617301.23e-4041.67Show/hide
Query:  MSTPHRFPPSNASPETLTHFSEEDELNLLNCYLQIARSANPTSNSQPTLDSPALDRIETALRPKFTYSHIADKLHRLKLQYHKLARTKSLIKTPHHRRIL
        MSTP   P +  +  +   FSE DE  +L C ++  +S +P      T+ +P ++RI   L  +F+ S I DK+ RL+++YHK ARTKSL++T H RRI 
Subjt:  MSTPHRFPPSNASPETLTHFSEEDELNLLNCYLQIARSANPTSNSQPTLDSPALDRIETALRPKFTYSHIADKLHRLKLQYHKLARTKSLIKTPHHRRIL

Query:  EIGRSIWGKPPTSRTKPQAILRAIPRRIKQRSGSSK-KGV-DLNDFPVLLSEFSRRFPGNGVWKEGLRGMEEKSLRDMNEKWVLLHIEEAELKARRAALL
        ++ + IWGK  T            P++ K+R  S K  GV DL+ FP L++EFSR  P N VWKE ++G+EE+ L+ M+++WVL+ +EEA+L A++A L+
Subjt:  EIGRSIWGKPPTSRTKPQAILRAIPRRIKQRSGSSK-KGV-DLNDFPVLLSEFSRRFPGNGVWKEGLRGMEEKSLRDMNEKWVLLHIEEAELKARRAALL

Query:  QKQL
        QKQ+
Subjt:  QKQL

W9SBT1 Uncharacterized protein9.25e-3941.95Show/hide
Query:  MSTPHRFPPSNASP-ETLTHFSEEDELNLLNCYLQIARSAN-------PTSNSQPTLDSPALDRIETALRPKFTYSHIADKLHRLKLQYHKLARTKSLIK
        M+T +  PP  +SP ++   FSE DE++LL  + +I++S++       P+S S  T+ S  LD IE++L  +F+++ I DKL RLKL+YH+ ARTKSLI+
Subjt:  MSTPHRFPPSNASP-ETLTHFSEEDELNLLNCYLQIARSAN-------PTSNSQPTLDSPALDRIETALRPKFTYSHIADKLHRLKLQYHKLARTKSLIK

Query:  TPHHRRILEIGRSIWGKPPTSRTKPQAILRAIPRRIKQRSGSSKKGVDLNDFPVLLSEFSRRFPGNGVWKEGLRGMEEKSLRDMNEKWVLLHIEEAELKA
        T H  R+  I RSIWG+   +  K          + K  + +    V L DFP L  EFSR  P NGVWK+GL+ +  + +R  NE+W+L+  EEAEL+A
Subjt:  TPHHRRILEIGRSIWGKPPTSRTKPQAILRAIPRRIKQRSGSSKKGVDLNDFPVLLSEFSRRFPGNGVWKEGLRGMEEKSLRDMNEKWVLLHIEEAELKA

Query:  RRAAL
        +RA L
Subjt:  RRAAL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAACGCCTCACCGTTTCCCACCGTCCAACGCCTCTCCCGAAACCCTAACCCATTTCTCCGAGGAAGATGAACTCAATCTCCTGAATTGCTACCTCCAAATC
GCCAGATCCGCGAACCCCACCAGCAATTCGCAGCCCACTCTCGACTCTCCGGCCTTGGACCGCATCGAGACCGCTCTCCGCCCAAAATTCACCTACTCCCACATC
GCCGATAAGCTCCACAGGCTCAAACTCCAGTACCACAAACTCGCAAGGACCAAGTCCTTGATCAAAACTCCCCACCACCGTCGAATTCTCGAGATCGGCCGAAGC
ATCTGGGGAAAACCCCCCACATCTAGAACAAAACCACAGGCGATTTTAAGGGCAATTCCACGGAGAATCAAACAAAGGTCAGGCTCAAGCAAAAAGGGGGTTGAT
CTGAATGACTTTCCCGTTCTTTTGAGTGAATTTTCTCGGCGGTTTCCGGGAAATGGGGTGTGGAAAGAAGGGCTGAGGGGAATGGAGGAGAAGAGTTTGAGGGAT
ATGAATGAGAAATGGGTTTTGTTGCATATTGAAGAGGCAGAGCTTAAGGCAAGAAGGGCTGCGTTATTACAGAAGCAACTTAGACTTGCAGACTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAACGCCTCACCGTTTCCCACCGTCCAACGCCTCTCCCGAAACCCTAACCCATTTCTCCGAGGAAGATGAACTCAATCTCCTGAATTGCTACCTCCAAATC
GCCAGATCCGCGAACCCCACCAGCAATTCGCAGCCCACTCTCGACTCTCCGGCCTTGGACCGCATCGAGACCGCTCTCCGCCCAAAATTCACCTACTCCCACATC
GCCGATAAGCTCCACAGGCTCAAACTCCAGTACCACAAACTCGCAAGGACCAAGTCCTTGATCAAAACTCCCCACCACCGTCGAATTCTCGAGATCGGCCGAAGC
ATCTGGGGAAAACCCCCCACATCTAGAACAAAACCACAGGCGATTTTAAGGGCAATTCCACGGAGAATCAAACAAAGGTCAGGCTCAAGCAAAAAGGGGGTTGAT
CTGAATGACTTTCCCGTTCTTTTGAGTGAATTTTCTCGGCGGTTTCCGGGAAATGGGGTGTGGAAAGAAGGGCTGAGGGGAATGGAGGAGAAGAGTTTGAGGGAT
ATGAATGAGAAATGGGTTTTGTTGCATATTGAAGAGGCAGAGCTTAAGGCAAGAAGGGCTGCGTTATTACAGAAGCAACTTAGACTTGCAGACTTCTGA
Protein sequenceShow/hide protein sequence
MSTPHRFPPSNASPETLTHFSEEDELNLLNCYLQIARSANPTSNSQPTLDSPALDRIETALRPKFTYSHIADKLHRLKLQYHKLARTKSLIKTPHHRRILEIGRS
IWGKPPTSRTKPQAILRAIPRRIKQRSGSSKKGVDLNDFPVLLSEFSRRFPGNGVWKEGLRGMEEKSLRDMNEKWVLLHIEEAELKARRAALLQKQLRLADF