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Csor.00g105190 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g105190
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionVPS54 isoform 1
Genome locationCsor_Chr17:8139622..8140035
RNA-Seq ExpressionCsor.00g105190
SyntenyCsor.00g105190
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575654.1 hypothetical protein SDJN03_26293, partial [Cucurbita argyrosperma subsp. sororia]2.22e-90100Show/hide
Query:  MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGLH
        MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGLH
Subjt:  MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGLH

Query:  GVKLKKVVGKFLRNLIKGDGDRHQLMMKKAIIKKSFP
        GVKLKKVVGKFLRNLIKGDGDRHQLMMKKAIIKKSFP
Subjt:  GVKLKKVVGKFLRNLIKGDGDRHQLMMKKAIIKKSFP

KAG7014203.1 hypothetical protein SDJN02_24378, partial [Cucurbita argyrosperma subsp. argyrosperma]1.26e-76100Show/hide
Query:  MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGLH
        MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGLH
Subjt:  MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGLH

Query:  GVKLKKVVGKFLRNLIKGDG
        GVKLKKVVGKFLRNLIKGDG
Subjt:  GVKLKKVVGKFLRNLIKGDG

XP_022953919.1 uncharacterized protein LOC111456324 [Cucurbita moschata]6.91e-8798.54Show/hide
Query:  MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGLH
        MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEIN LQIVKKQHEDGLH
Subjt:  MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGLH

Query:  GVKLKKVVGKFLRNLIKGDGDRHQLMMKKAIIKKSFP
        GVKLKKVVGKFLRNLIKGDGDRHQLM KKAIIKKSFP
Subjt:  GVKLKKVVGKFLRNLIKGDGDRHQLMMKKAIIKKSFP

XP_022991938.1 uncharacterized protein LOC111488430 [Cucurbita maxima]4.83e-7891.24Show/hide
Query:  MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGLH
        MSHKRHYDISMSKRTRKPAKIQDEIQTGT NNDDQYE+FGTK FENNDHKSLKQLINGEGKTEIGSDERN +RNSLGKHFSEEEINGLQIVKKQHEDGL 
Subjt:  MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGLH

Query:  GVKLKKVVGKFLRNLIKGDGDRHQLMMKKAIIKKSFP
        GVKLKKVVGKFLRNLIKG  D+HQLM KKA  KKSFP
Subjt:  GVKLKKVVGKFLRNLIKGDGDRHQLMMKKAIIKKSFP

XP_023549383.1 uncharacterized protein LOC111807744 [Cucurbita pepo subsp. pepo]2.49e-8093.43Show/hide
Query:  MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGLH
        MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTK FENNDHKSLKQLINGEGK EIGSDERNGERNSLGKHFSEEEIN LQIVKKQHEDGL 
Subjt:  MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGLH

Query:  GVKLKKVVGKFLRNLIKGDGDRHQLMMKKAIIKKSFP
        GVKLKK+VGKFLRNLIKG GDRHQLM K AI KKSFP
Subjt:  GVKLKKVVGKFLRNLIKGDGDRHQLMMKKAIIKKSFP

TrEMBL top hitse value%identityAlignment
A0A0A0KBK8 Uncharacterized protein4.36e-5573.91Show/hide
Query:  MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYE-RFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGL
        +SHK+HYDISMSKRTRKPAKIQDE+Q   +N+DD      G +   NNDHKSLKQLI+GEGK EI SDE N ERNSLG+HFS+EEIN LQIVKKQH+DGL
Subjt:  MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYE-RFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGL

Query:  HGVKLKKVVGKFLRNLIKGDGDRHQ-LMMKKAIIKKSF
         GVKLKKVVGKFLRNLIKG GD HQ  +MKK I KKSF
Subjt:  HGVKLKKVVGKFLRNLIKGDGDRHQ-LMMKKAIIKKSF

A0A1S3CFF2 uncharacterized protein LOC1034998744.02e-5370.8Show/hide
Query:  MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDD-QYERFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGL
        +SHK+HYDISMSKRTRKPAKIQDE+Q  TS +D       G +   NNDHKSLKQLI+GEGK E   DE N ERNSLG+HFS+EEIN LQIVKKQH+DGL
Subjt:  MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDD-QYERFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGL

Query:  HGVKLKKVVGKFLRNLIKGDGDRHQLMMKKAIIKKSF
         GVKLKKVVGKFLRNLIKG GD    +MKK   KKSF
Subjt:  HGVKLKKVVGKFLRNLIKGDGDRHQLMMKKAIIKKSF

A0A5A7US55 Uncharacterized protein4.02e-5370.8Show/hide
Query:  MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDD-QYERFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGL
        +SHK+HYDISMSKRTRKPAKIQDE+Q  TS +D       G +   NNDHKSLKQLI+GEGK E   DE N ERNSLG+HFS+EEIN LQIVKKQH+DGL
Subjt:  MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDD-QYERFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGL

Query:  HGVKLKKVVGKFLRNLIKGDGDRHQLMMKKAIIKKSF
         GVKLKKVVGKFLRNLIKG GD    +MKK   KKSF
Subjt:  HGVKLKKVVGKFLRNLIKGDGDRHQLMMKKAIIKKSF

A0A6J1GRB0 uncharacterized protein LOC1114563243.35e-8798.54Show/hide
Query:  MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGLH
        MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEIN LQIVKKQHEDGLH
Subjt:  MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGLH

Query:  GVKLKKVVGKFLRNLIKGDGDRHQLMMKKAIIKKSFP
        GVKLKKVVGKFLRNLIKGDGDRHQLM KKAIIKKSFP
Subjt:  GVKLKKVVGKFLRNLIKGDGDRHQLMMKKAIIKKSFP

A0A6J1JXP3 uncharacterized protein LOC1114884302.34e-7891.24Show/hide
Query:  MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGLH
        MSHKRHYDISMSKRTRKPAKIQDEIQTGT NNDDQYE+FGTK FENNDHKSLKQLINGEGKTEIGSDERN +RNSLGKHFSEEEINGLQIVKKQHEDGL 
Subjt:  MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGLH

Query:  GVKLKKVVGKFLRNLIKGDGDRHQLMMKKAIIKKSFP
        GVKLKKVVGKFLRNLIKG  D+HQLM KKA  KKSFP
Subjt:  GVKLKKVVGKFLRNLIKGDGDRHQLMMKKAIIKKSFP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCATAAACGCCATTATGATATCTCCATGTCAAAGAGAACAAGAAAGCCAGCCAAAATCCAAGATGAGATTCAAACCGGCACATCGAACAATGACGATCAA
TACGAGAGGTTTGGCACAAAAGAGTTCGAGAACAACGACCATAAAAGCTTAAAACAGCTCATCAATGGGGAAGGGAAAACGGAAATAGGGTCGGACGAGAGGAAC
GGAGAAAGGAACTCGCTCGGAAAACACTTTAGTGAGGAAGAGATCAACGGTCTTCAAATTGTGAAGAAACAACATGAAGATGGACTACATGGAGTGAAGCTGAAA
AAAGTTGTCGGAAAATTTTTGAGAAATTTGATCAAAGGTGATGGTGATCGACACCAGCTGATGATGAAGAAGGCAATTATAAAAAAATCTTTCCCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCATAAACGCCATTATGATATCTCCATGTCAAAGAGAACAAGAAAGCCAGCCAAAATCCAAGATGAGATTCAAACCGGCACATCGAACAATGACGATCAA
TACGAGAGGTTTGGCACAAAAGAGTTCGAGAACAACGACCATAAAAGCTTAAAACAGCTCATCAATGGGGAAGGGAAAACGGAAATAGGGTCGGACGAGAGGAAC
GGAGAAAGGAACTCGCTCGGAAAACACTTTAGTGAGGAAGAGATCAACGGTCTTCAAATTGTGAAGAAACAACATGAAGATGGACTACATGGAGTGAAGCTGAAA
AAAGTTGTCGGAAAATTTTTGAGAAATTTGATCAAAGGTGATGGTGATCGACACCAGCTGATGATGAAGAAGGCAATTATAAAAAAATCTTTCCCCTAA
Protein sequenceShow/hide protein sequence
MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGLHGVKLK
KVVGKFLRNLIKGDGDRHQLMMKKAIIKKSFP