; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Csor.00g105690 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g105690
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionRibosomal protein
Genome locationCsor_Chr17:8424331..8427667
RNA-Seq ExpressionCsor.00g105690
SyntenyCsor.00g105690
Gene Ontology termsGO:0000470 - maturation of LSU-rRNA (biological process)
GO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR005878 - Ribosomal protein L1, bacterial-type
IPR016095 - Ribosomal protein L1, 3-layer alpha/beta-sandwich
IPR023673 - Ribosomal protein L1, conserved site
IPR023674 - Ribosomal protein L1-like
IPR028364 - Ribosomal protein L1/ribosomal biogenesis protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575704.1 50S ribosomal protein L1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.37e-251100Show/hide
Query:  MAMAGYSPTVPSPLAMARTSSVHHLDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEENDG
        MAMAGYSPTVPSPLAMARTSSVHHLDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEENDG
Subjt:  MAMAGYSPTVPSPLAMARTSSVHHLDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEENDG

Query:  LAASIVPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQ
        LAASIVPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQ
Subjt:  LAASIVPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQ

Query:  GEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADF
        GEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADF
Subjt:  GEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADF

Query:  SADDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDYKIPSSNA
        SADDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDYKIPSSNA
Subjt:  SADDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDYKIPSSNA

XP_022152504.1 50S ribosomal protein L1, chloroplastic-like [Momordica charantia]9.79e-22791.67Show/hide
Query:  MAMAGYSPTVPSPLAMARTSSVHHLDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEEN-D
        MAMA  SPT  S L MA TSSVH  D+ SL + RP+AASST  IFSLCHPLT+QRRGGRSINWVDLNFRRESR HLVVAALAAEIEVAEVV+ENGEE   
Subjt:  MAMAGYSPTVPSPLAMARTSSVHHLDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEEN-D

Query:  GLAASIVPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLT
        GLA S+VPK+KRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMS TKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLT
Subjt:  GLAASIVPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLT

Query:  QGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKAD
        QGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVE+RADKTGIVHLPFGKAD
Subjt:  QGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKAD

Query:  FSADDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDYKIPSSNA
        FS DDLLVNLLAA+KSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDYKIPSSNA
Subjt:  FSADDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDYKIPSSNA

XP_022954232.1 50S ribosomal protein L1, chloroplastic-like [Cucurbita moschata]5.10e-24798.61Show/hide
Query:  MAMAGYSPTVPSPLAMARTSSVHHLDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEENDG
        MAMAGYSPTVPSPLAMARTSSVH LDLSSLFAVRPIAASST HIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEENDG
Subjt:  MAMAGYSPTVPSPLAMARTSSVHHLDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEENDG

Query:  LAASIVPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQ
        LAASI PKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQ SKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQ
Subjt:  LAASIVPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQ

Query:  GEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADF
        GEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADF
Subjt:  GEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADF

Query:  SADDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDYKIPSSNA
        S DDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDYKIPSSNA
Subjt:  SADDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDYKIPSSNA

XP_022991908.1 50S ribosomal protein L1, chloroplastic-like [Cucurbita maxima]1.03e-24698.33Show/hide
Query:  MAMAGYSPTVPSPLAMARTSSVHHLDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEENDG
        MAMAGYSPTVPSPLAMARTSSVH LDLSSLFAVRPIAASST HIFSLCHPL LQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGE+NDG
Subjt:  MAMAGYSPTVPSPLAMARTSSVHHLDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEENDG

Query:  LAASIVPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQ
        LAASIVPKIKRGKAALPLKRDRTRSKRFLEIQKLRESK+EYDLKTAISLLKQMSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQ
Subjt:  LAASIVPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQ

Query:  GEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADF
        GEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADF
Subjt:  GEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADF

Query:  SADDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDYKIPSSNA
        S DDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDYKIPSSNA
Subjt:  SADDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDYKIPSSNA

XP_023549332.1 50S ribosomal protein L1, chloroplastic-like [Cucurbita pepo subsp. pepo]5.10e-24798.61Show/hide
Query:  MAMAGYSPTVPSPLAMARTSSVHHLDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEENDG
        MAMAGYSPTVPSPLAMARTSSVH LDLSSLFA RPIAASST HIFSLCHPL LQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEENDG
Subjt:  MAMAGYSPTVPSPLAMARTSSVHHLDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEENDG

Query:  LAASIVPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQ
        LAASIVPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQ
Subjt:  LAASIVPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQ

Query:  GEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADF
        GEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADF
Subjt:  GEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADF

Query:  SADDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDYKIPSSNA
        S DDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDYKIPSSNA
Subjt:  SADDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDYKIPSSNA

TrEMBL top hitse value%identityAlignment
A0A0A0K886 Ribosomal protein2.66e-21788.61Show/hide
Query:  MAMAGYSPTVPSPLAMARTSSVHHLDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEE-ND
        MAMA  +PT+ S L MA TSSVH  D SSL + RPIAASST +IFSLCHPL LQRRGGRSINWVDL F RE R HLVVAALAAEIEV E V+ENGEE N 
Subjt:  MAMAGYSPTVPSPLAMARTSSVHHLDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEE-ND

Query:  GLAASIVPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLT
        G A S++PKIK+GKAALPLKRDRTRSKRFLEIQKLRE+K EYDLKTAISLLKQ S TKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLT
Subjt:  GLAASIVPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLT

Query:  QGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKAD
        QGEK DEAKNAGADLVGG+DLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVE+RADKTGIVHLPFGKAD
Subjt:  QGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKAD

Query:  FSADDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDYKIPSSNA
        FS DDLLVNLL+AIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLN REMLDYKIPSSNA
Subjt:  FSADDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDYKIPSSNA

A0A5D3CGN7 Ribosomal protein7.98e-21989.17Show/hide
Query:  MAMAGYSPTVPSPLAMARTSSVHHLDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEE-ND
        MAMA  +PTV S   MA TSSVH  D SSL + RPIAASST +IFSLCHPL LQRRGGRS NWVDL F RE R HLVVAALAAEIEVAEVV+ENGEE N 
Subjt:  MAMAGYSPTVPSPLAMARTSSVHHLDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEE-ND

Query:  GLAASIVPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLT
        G A S +PKIK+GKAALPLKRDRTRSKRFLEIQKLRE+K EYDLKTAISLLKQ S TKF ETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLT
Subjt:  GLAASIVPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLT

Query:  QGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKAD
        QGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVE+RADKTGIVHLPFGKAD
Subjt:  QGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKAD

Query:  FSADDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDYKIPSSNA
        FS DDLLVNLL+AIKSVE NKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDYKIPSSNA
Subjt:  FSADDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDYKIPSSNA

A0A6J1DG73 Ribosomal protein4.74e-22791.67Show/hide
Query:  MAMAGYSPTVPSPLAMARTSSVHHLDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEEN-D
        MAMA  SPT  S L MA TSSVH  D+ SL + RP+AASST  IFSLCHPLT+QRRGGRSINWVDLNFRRESR HLVVAALAAEIEVAEVV+ENGEE   
Subjt:  MAMAGYSPTVPSPLAMARTSSVHHLDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEEN-D

Query:  GLAASIVPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLT
        GLA S+VPK+KRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMS TKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLT
Subjt:  GLAASIVPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLT

Query:  QGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKAD
        QGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVE+RADKTGIVHLPFGKAD
Subjt:  QGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKAD

Query:  FSADDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDYKIPSSNA
        FS DDLLVNLLAA+KSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDYKIPSSNA
Subjt:  FSADDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDYKIPSSNA

A0A6J1GQH4 Ribosomal protein2.47e-24798.61Show/hide
Query:  MAMAGYSPTVPSPLAMARTSSVHHLDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEENDG
        MAMAGYSPTVPSPLAMARTSSVH LDLSSLFAVRPIAASST HIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEENDG
Subjt:  MAMAGYSPTVPSPLAMARTSSVHHLDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEENDG

Query:  LAASIVPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQ
        LAASI PKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQ SKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQ
Subjt:  LAASIVPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQ

Query:  GEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADF
        GEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADF
Subjt:  GEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADF

Query:  SADDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDYKIPSSNA
        S DDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDYKIPSSNA
Subjt:  SADDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDYKIPSSNA

A0A6J1JXL6 Ribosomal protein4.99e-24798.33Show/hide
Query:  MAMAGYSPTVPSPLAMARTSSVHHLDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEENDG
        MAMAGYSPTVPSPLAMARTSSVH LDLSSLFAVRPIAASST HIFSLCHPL LQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGE+NDG
Subjt:  MAMAGYSPTVPSPLAMARTSSVHHLDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEENDG

Query:  LAASIVPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQ
        LAASIVPKIKRGKAALPLKRDRTRSKRFLEIQKLRESK+EYDLKTAISLLKQMSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQ
Subjt:  LAASIVPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQ

Query:  GEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADF
        GEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADF
Subjt:  GEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADF

Query:  SADDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDYKIPSSNA
        S DDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDYKIPSSNA
Subjt:  SADDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDYKIPSSNA

SwissProt top hitse value%identityAlignment
B0JNQ5 50S ribosomal protein L13.0e-7662.17Show/hide
Query:  SKRFLEIQKLRESKKEYDLKTAISLLKQMSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQI
        S+R  + Q   E+ K Y+   A++LLK+++  KF ETAEAH RL IDPKY DQQLR TV+LPKGTG+TV+VAV+T+GEK  EA NAGAD+VG E+LIE+I
Subjt:  SKRFLEIQKLRESKKEYDLKTAISLLKQMSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQI

Query:  KGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADFSADDLLVNLLAAIKSVEVNKPTGA
          G M+F+ LIA+PDMMPKVA LG+ LGPRGLMP+PK GTVTT++  AIAEFK GK+EFRAD+TGIVH+ FGKA FSA+DLLVNL A  ++V+ N+P+GA
Subjt:  KGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADFSADDLLVNLLAAIKSVEVNKPTGA

Query:  KGVYWKSAHICSSMGPSIRLNIREMLDYKI
        KG YW++ ++ SSMGPSI+++I  + D K+
Subjt:  KGVYWKSAHICSSMGPSIRLNIREMLDYKI

P49208 50S ribosomal protein L1, chloroplastic (Fragment)3.0e-7686.9Show/hide
Query:  IKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAK
        +++GK    LK DR RSKRFLEIQKLRE KKEYDLKTAISL+K+ +KTKFVET EAHFRLNIDPKYNDQQLRATV+LPKGTG+ +KVAVLTQGE+FDEAK
Subjt:  IKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAK

Query:  NAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEF
        NAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGK+LGPRGLMPNPKAGTVT NIPQAIAEF
Subjt:  NAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEF

Q3MA18 50S ribosomal protein L19.7e-7560.87Show/hide
Query:  SKRFLEIQKLRESKKEYDLKTAISLLKQMSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQI
        S+R  E+Q   E  +EY    A+SLLK+ +  KF E AEAH RL IDPKY DQQLR TV LPKGTGQ V+VAV+ +GEK  EA NAGAD+ G E+LI++I
Subjt:  SKRFLEIQKLRESKKEYDLKTAISLLKQMSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQI

Query:  KGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADFSADDLLVNLLAAIKSVEVNKPTGA
        + G M+FDKLIA+PD+MP+VA LGK+LGPRGLMP+PK GTVT +I  AIAEFK GK+EFRAD+TGIVH+ FGKA FS +DLLVNL A  ++++ N+P+GA
Subjt:  KGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADFSADDLLVNLLAAIKSVEVNKPTGA

Query:  KGVYWKSAHICSSMGPSIRLNIREMLDYKI
        KG YW++ ++ ++MGPSIR++I  + DYK+
Subjt:  KGVYWKSAHICSSMGPSIRLNIREMLDYKI

Q9LE95 50S ribosomal protein L1, chloroplastic4.3e-12368.01Show/hide
Query:  LAMARTSSVHHLDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHL---VVAALAAEIEVAEVVDENGEENDGLAASIVPKIK
        L  A +S  +  D S     +P+  +S     SLC  LTL +R    + WVD   +++S   +   V+AA+AAE EVA++ +E GE           K K
Subjt:  LAMARTSSVHHLDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHL---VVAALAAEIEVAEVVDENGEENDGLAASIVPKIK

Query:  RGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNA
        +GKAALPLK DRTRSKRFLEIQKLRE K+EYDLKTA+SL+KQMS TKFVETAEAHFRLNIDPKYNDQQLRATV+LPKGTG+TVK+AVL QG+K DEAK A
Subjt:  RGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNA

Query:  GADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADFSADDLLVNLL
        GAD+VGGE+LIEQIKGGFM+FDKLIA+ DMM KVASLG++LGPRGLMP PKAGTVT N+ QA+ EFK+GKVEFR DKTGIVH+PFGK +F  +DLL+NL 
Subjt:  GADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADFSADDLLVNLL

Query:  AAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDYKIPSS
        A IKSVE NKPTGAKGVYWKSAHI SSMGPSIRLNIREMLDYK PS+
Subjt:  AAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDYKIPSS

Q9LY66 50S ribosomal protein L1, chloroplastic4.9e-11976.12Show/hide
Query:  RESRVHLVVAALAAEIEVAEVVDENGEENDGLAASIVPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMSKTKFVETAEAHFRLN
        R S    +V+A+AAE   A++  E   E    A    PK K+GKAAL LKRDRTRSKRFLEIQKLRE+KKEYD+ TAISLLKQ + T+FVE+ EAHFRLN
Subjt:  RESRVHLVVAALAAEIEVAEVVDENGEENDGLAASIVPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMSKTKFVETAEAHFRLN

Query:  IDPKYNDQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNI
        IDPKYNDQQLRATV+LPKGTGQTV VAVL QGEK DEAK+AGAD+VG +DLIEQIKGGFMEFDKLIASPDMM KVA LGK+LGPRGLMPNPKAGTVT NI
Subjt:  IDPKYNDQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNI

Query:  PQAIAEFKQGKVEFRADKTGIVHLPFGKADFSADDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDYKIPSSN
        PQAI EFK+GKVEFRADKTGIVH+PFGK +F+ +DLL+N LAA+KSVE NKP GAKGVYWKSAHICSSMGPSI+LNIREM+D+K P++N
Subjt:  PQAIAEFKQGKVEFRADKTGIVHLPFGKADFSADDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDYKIPSSN

Arabidopsis top hitse value%identityAlignment
AT2G42710.1 Ribosomal protein L1p/L10e family1.2e-4040.62Show/hide
Query:  KLRESKKE-YDLKTAISLLKQMSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQI-KGGFME
        +L+  KK  +DL  AI  +K  +K KF ET EAH RL I+   ++  +R T+ LP    + VKVA   +G   ++AK AGAD+VGG +LIE+I K G ++
Subjt:  KLRESKKE-YDLKTAISLLKQMSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQI-KGGFME

Query:  FDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADFSADDLLVNLLAAIKSVEVNKPTGAKGV---
        FD+ +A+P MMP+V  + ++L   GLMPNPK G+VT ++ +A+ + K G  +FR DKT I+H+P GK  FS + L  N+ A + ++ + KP G K     
Subjt:  FDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADFSADDLLVNLLAAIKSVEVNKPTGAKGV---

Query:  --YWKSAHICSSMGPSIRLNIREM
          Y  + H+CS+MG    ++I+ +
Subjt:  --YWKSAHICSSMGPSIRLNIREM

AT3G63490.1 Ribosomal protein L1p/L10e family3.5e-12076.12Show/hide
Query:  RESRVHLVVAALAAEIEVAEVVDENGEENDGLAASIVPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMSKTKFVETAEAHFRLN
        R S    +V+A+AAE   A++  E   E    A    PK K+GKAAL LKRDRTRSKRFLEIQKLRE+KKEYD+ TAISLLKQ + T+FVE+ EAHFRLN
Subjt:  RESRVHLVVAALAAEIEVAEVVDENGEENDGLAASIVPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMSKTKFVETAEAHFRLN

Query:  IDPKYNDQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNI
        IDPKYNDQQLRATV+LPKGTGQTV VAVL QGEK DEAK+AGAD+VG +DLIEQIKGGFMEFDKLIASPDMM KVA LGK+LGPRGLMPNPKAGTVT NI
Subjt:  IDPKYNDQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNI

Query:  PQAIAEFKQGKVEFRADKTGIVHLPFGKADFSADDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDYKIPSSN
        PQAI EFK+GKVEFRADKTGIVH+PFGK +F+ +DLL+N LAA+KSVE NKP GAKGVYWKSAHICSSMGPSI+LNIREM+D+K P++N
Subjt:  PQAIAEFKQGKVEFRADKTGIVHLPFGKADFSADDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDYKIPSSN

AT3G63490.2 Ribosomal protein L1p/L10e family9.7e-7869.3Show/hide
Query:  RESRVHLVVAALAAEIEVAEVVDENGEENDGLAASIVPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMSKTKFVETAEAHFRLN
        R S    +V+A+AAE   A++  E   E    A    PK K+GKAAL LKRDRTRSKRFLEIQKLRE+KKEYD+ TAISLLKQ + T+FVE+ EAHFRLN
Subjt:  RESRVHLVVAALAAEIEVAEVVDENGEENDGLAASIVPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMSKTKFVETAEAHFRLN

Query:  IDPKYNDQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNI
        IDPKYNDQQLRATV+LPKGTGQTV VAVL QGEK DEAK+AGAD+VG +DLIEQIKGGFMEFDKLIASPDMM KVA LGK+LGPRGLMPNPKAGTVT NI
Subjt:  IDPKYNDQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNI

Query:  PQAIAEFKQGKVEFRADKTGIVHLPFGK
        PQ+    ++GK+     K G+     GK
Subjt:  PQAIAEFKQGKVEFRADKTGIVHLPFGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATGGCCGGTTATAGCCCCACTGTGCCCTCACCCCTTGCCATGGCCCGCACTTCTTCAGTGCATCATCTGGACCTTTCTTCCCTTTTCGCCGTCAGGCCG
ATTGCTGCCTCTTCCACCACCCACATCTTCTCTTTATGCCACCCCTTAACTCTGCAGCGCAGGGGAGGGAGGTCTATCAATTGGGTCGACCTTAATTTTAGAAGA
GAATCTAGGGTTCATTTGGTTGTGGCTGCTTTAGCTGCGGAAATTGAAGTGGCTGAGGTTGTGGATGAGAATGGAGAGGAGAATGATGGATTAGCTGCTTCAATT
GTGCCCAAGATTAAGAGGGGAAAGGCTGCATTGCCTCTTAAGAGGGATAGGACCAGATCAAAGAGGTTCCTGGAAATTCAAAAATTGAGGGAAAGTAAAAAGGAG
TATGACCTGAAAACAGCAATATCTTTGTTGAAACAAATGTCTAAGACGAAATTCGTGGAAACCGCCGAAGCCCACTTCCGATTAAACATCGATCCCAAATATAAC
GATCAACAGCTGAGAGCAACAGTAAATCTTCCCAAGGGAACTGGACAGACAGTCAAGGTAGCTGTGCTTACTCAAGGTGAAAAATTCGACGAAGCGAAAAACGCA
GGAGCTGATTTGGTTGGTGGTGAGGATTTGATAGAACAGATCAAAGGAGGTTTCATGGAATTTGATAAGCTAATTGCTTCACCAGATATGATGCCCAAGGTTGCT
AGTCTAGGTAAGCTTCTAGGACCTCGAGGACTGATGCCGAACCCAAAAGCTGGCACCGTTACGACAAATATACCTCAGGCTATAGCAGAATTCAAGCAGGGAAAA
GTCGAATTCCGAGCGGATAAAACCGGGATTGTTCACTTACCTTTCGGGAAGGCAGACTTTTCGGCAGATGACCTCCTCGTGAACTTGCTTGCTGCAATAAAATCA
GTAGAGGTAAACAAGCCAACAGGTGCTAAAGGAGTATACTGGAAGAGCGCGCATATATGCTCGTCGATGGGGCCTTCGATTCGATTAAACATAAGGGAAATGCTT
GATTACAAGATCCCATCATCAAATGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAATGGCCGGTTATAGCCCCACTGTGCCCTCACCCCTTGCCATGGCCCGCACTTCTTCAGTGCATCATCTGGACCTTTCTTCCCTTTTCGCCGTCAGGCCG
ATTGCTGCCTCTTCCACCACCCACATCTTCTCTTTATGCCACCCCTTAACTCTGCAGCGCAGGGGAGGGAGGTCTATCAATTGGGTCGACCTTAATTTTAGAAGA
GAATCTAGGGTTCATTTGGTTGTGGCTGCTTTAGCTGCGGAAATTGAAGTGGCTGAGGTTGTGGATGAGAATGGAGAGGAGAATGATGGATTAGCTGCTTCAATT
GTGCCCAAGATTAAGAGGGGAAAGGCTGCATTGCCTCTTAAGAGGGATAGGACCAGATCAAAGAGGTTCCTGGAAATTCAAAAATTGAGGGAAAGTAAAAAGGAG
TATGACCTGAAAACAGCAATATCTTTGTTGAAACAAATGTCTAAGACGAAATTCGTGGAAACCGCCGAAGCCCACTTCCGATTAAACATCGATCCCAAATATAAC
GATCAACAGCTGAGAGCAACAGTAAATCTTCCCAAGGGAACTGGACAGACAGTCAAGGTAGCTGTGCTTACTCAAGGTGAAAAATTCGACGAAGCGAAAAACGCA
GGAGCTGATTTGGTTGGTGGTGAGGATTTGATAGAACAGATCAAAGGAGGTTTCATGGAATTTGATAAGCTAATTGCTTCACCAGATATGATGCCCAAGGTTGCT
AGTCTAGGTAAGCTTCTAGGACCTCGAGGACTGATGCCGAACCCAAAAGCTGGCACCGTTACGACAAATATACCTCAGGCTATAGCAGAATTCAAGCAGGGAAAA
GTCGAATTCCGAGCGGATAAAACCGGGATTGTTCACTTACCTTTCGGGAAGGCAGACTTTTCGGCAGATGACCTCCTCGTGAACTTGCTTGCTGCAATAAAATCA
GTAGAGGTAAACAAGCCAACAGGTGCTAAAGGAGTATACTGGAAGAGCGCGCATATATGCTCGTCGATGGGGCCTTCGATTCGATTAAACATAAGGGAAATGCTT
GATTACAAGATCCCATCATCAAATGCTTGA
Protein sequenceShow/hide protein sequence
MAMAGYSPTVPSPLAMARTSSVHHLDLSSLFAVRPIAASSTTHIFSLCHPLTLQRRGGRSINWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGEENDGLAASI
VPKIKRGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMSKTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNA
GADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADFSADDLLVNLLAAIKS
VEVNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDYKIPSSNA