; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Csor.00g111480 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g111480
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionCOMPASS-like H3K4 histone methylase component WDR5A
Genome locationCsor_Chr07:2675168..2676215
RNA-Seq ExpressionCsor.00g111480
SyntenyCsor.00g111480
Gene Ontology termsGO:0051568 - histone H3-K4 methylation (biological process)
GO:0048188 - Set1C/COMPASS complex (cellular component)
GO:0008168 - methyltransferase activity (molecular function)
GO:0042393 - histone binding (molecular function)
InterPro domainsIPR001680 - WD40 repeat
IPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR036322 - WD40-repeat-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594933.1 COMPASS-like H3K4 histone methylase component WDR5A, partial [Cucurbita argyrosperma subsp. sororia]4.09e-89100Show/hide
Query:  MNCVIESNHLVLCSIFCYWTLTGYNRAISSVKFSADGRLLGSSSADKTLRTYACSNSILTPLQEFRGHEQGVSDLAFSSDSRLLVSASDDKTPRLWDVSS
        MNCVIESNHLVLCSIFCYWTLTGYNRAISSVKFSADGRLLGSSSADKTLRTYACSNSILTPLQEFRGHEQGVSDLAFSSDSRLLVSASDDKTPRLWDVSS
Subjt:  MNCVIESNHLVLCSIFCYWTLTGYNRAISSVKFSADGRLLGSSSADKTLRTYACSNSILTPLQEFRGHEQGVSDLAFSSDSRLLVSASDDKTPRLWDVSS

Query:  GSLIKTLNGHTNHVLCVVCCVLPSIPNPT
        GSLIKTLNGHTNHVLCVVCCVLPSIPNPT
Subjt:  GSLIKTLNGHTNHVLCVVCCVLPSIPNPT

KAG7026895.1 Kinesin-like protein KIN-8B [Cucurbita argyrosperma subsp. argyrosperma]8.17e-6899.12Show/hide
Query:  ESNHLVLCSIFCYWTLTGYNRAISSVKFSADGRLLGSSSADKTLRTYACSNSILTPLQEFRGHEQGVSDLAFSSDSRLLVSASDDKTPRLWDVSSGSLIK
         SNHLVLCSIFCYWTLTGYNRAISSVKFSADGRLLGSSSADKTLRTYACSNSILTPLQEFRGHEQGVSDLAFSSDSRLLVSASDDKTPRLWDVSSGSLIK
Subjt:  ESNHLVLCSIFCYWTLTGYNRAISSVKFSADGRLLGSSSADKTLRTYACSNSILTPLQEFRGHEQGVSDLAFSSDSRLLVSASDDKTPRLWDVSSGSLIK

Query:  TLNGHTNHVLCVVC
        TLNGHTNHVLCVVC
Subjt:  TLNGHTNHVLCVVC

XP_022133170.1 COMPASS-like H3K4 histone methylase component WDR5A [Momordica charantia]2.34e-5291.84Show/hide
Query:  TLTGYNRAISSVKFSADGRLLGSSSADKTLRTYACSNSILTPLQEFRGHEQGVSDLAFSSDSRLLVSASDDKTPRLWDVSSGSLIKTLNGHTNHVLCV
        TLTG+ RAISSVKFSADGRLLGSSSADKTLRTYACSNS LTPLQEF+GHEQGVSDLAFSSDSR LVSASDDKT RLWDVSSGSLIKTLNGHTN+V CV
Subjt:  TLTGYNRAISSVKFSADGRLLGSSSADKTLRTYACSNSILTPLQEFRGHEQGVSDLAFSSDSRLLVSASDDKTPRLWDVSSGSLIKTLNGHTNHVLCV

XP_022950714.1 COMPASS-like H3K4 histone methylase component WDR5A [Cucurbita moschata]1.00e-5088.78Show/hide
Query:  TLTGYNRAISSVKFSADGRLLGSSSADKTLRTYACSNSILTPLQEFRGHEQGVSDLAFSSDSRLLVSASDDKTPRLWDVSSGSLIKTLNGHTNHVLCV
        TLTG+ RAISSVKFSADGRLLGSSSADKTLRTY+CSNS LTPL EF+GHEQGVSDLAFSSDSR LVSASDDKT RLWDVS+GSLIKTLNGHTN+V CV
Subjt:  TLTGYNRAISSVKFSADGRLLGSSSADKTLRTYACSNSILTPLQEFRGHEQGVSDLAFSSDSRLLVSASDDKTPRLWDVSSGSLIKTLNGHTNHVLCV

XP_038883363.1 COMPASS-like H3K4 histone methylase component WDR5A [Benincasa hispida]5.67e-5086.73Show/hide
Query:  TLTGYNRAISSVKFSADGRLLGSSSADKTLRTYACSNSILTPLQEFRGHEQGVSDLAFSSDSRLLVSASDDKTPRLWDVSSGSLIKTLNGHTNHVLCV
        TLT + RAISSVKFSADGRLLGSSSADKTLRTY+CSNS LTP+QEF+GHEQGVSDLAFSSDSR LVSASDDKT RLWDVS+GSL+KTLNGHTN+V CV
Subjt:  TLTGYNRAISSVKFSADGRLLGSSSADKTLRTYACSNSILTPLQEFRGHEQGVSDLAFSSDSRLLVSASDDKTPRLWDVSSGSLIKTLNGHTNHVLCV

TrEMBL top hitse value%identityAlignment
A0A0A0KGK9 WD_REPEATS_REGION domain-containing protein3.26e-4984.69Show/hide
Query:  TLTGYNRAISSVKFSADGRLLGSSSADKTLRTYACSNSILTPLQEFRGHEQGVSDLAFSSDSRLLVSASDDKTPRLWDVSSGSLIKTLNGHTNHVLCV
        TLT + R ISSVKFSADGRLLGSSSADKTLRTY+CSNS +TP+QEF+GHEQGVSDLAFSSDSR LVSASDDKT RLWDVS+GSL+KTLNGHTN+V CV
Subjt:  TLTGYNRAISSVKFSADGRLLGSSSADKTLRTYACSNSILTPLQEFRGHEQGVSDLAFSSDSRLLVSASDDKTPRLWDVSSGSLIKTLNGHTNHVLCV

A0A5A7SYL9 COMPASS-like H3K4 histone methylase component WDR5A3.26e-4984.69Show/hide
Query:  TLTGYNRAISSVKFSADGRLLGSSSADKTLRTYACSNSILTPLQEFRGHEQGVSDLAFSSDSRLLVSASDDKTPRLWDVSSGSLIKTLNGHTNHVLCV
        TLT + R ISSVKFSADGRLLGSSSADKTLRTY+CSNS +TP+QEF+GHEQGVSDLAFSSDSR LVSASDDKT RLWDVS+GSL+KTLNGHTN+V CV
Subjt:  TLTGYNRAISSVKFSADGRLLGSSSADKTLRTYACSNSILTPLQEFRGHEQGVSDLAFSSDSRLLVSASDDKTPRLWDVSSGSLIKTLNGHTNHVLCV

A0A6J1BUJ4 COMPASS-like H3K4 histone methylase component WDR5A1.13e-5291.84Show/hide
Query:  TLTGYNRAISSVKFSADGRLLGSSSADKTLRTYACSNSILTPLQEFRGHEQGVSDLAFSSDSRLLVSASDDKTPRLWDVSSGSLIKTLNGHTNHVLCV
        TLTG+ RAISSVKFSADGRLLGSSSADKTLRTYACSNS LTPLQEF+GHEQGVSDLAFSSDSR LVSASDDKT RLWDVSSGSLIKTLNGHTN+V CV
Subjt:  TLTGYNRAISSVKFSADGRLLGSSSADKTLRTYACSNSILTPLQEFRGHEQGVSDLAFSSDSRLLVSASDDKTPRLWDVSSGSLIKTLNGHTNHVLCV

A0A6J1GGN2 COMPASS-like H3K4 histone methylase component WDR5A4.86e-5188.78Show/hide
Query:  TLTGYNRAISSVKFSADGRLLGSSSADKTLRTYACSNSILTPLQEFRGHEQGVSDLAFSSDSRLLVSASDDKTPRLWDVSSGSLIKTLNGHTNHVLCV
        TLTG+ RAISSVKFSADGRLLGSSSADKTLRTY+CSNS LTPL EF+GHEQGVSDLAFSSDSR LVSASDDKT RLWDVS+GSLIKTLNGHTN+V CV
Subjt:  TLTGYNRAISSVKFSADGRLLGSSSADKTLRTYACSNSILTPLQEFRGHEQGVSDLAFSSDSRLLVSASDDKTPRLWDVSSGSLIKTLNGHTNHVLCV

A0A6J1ILQ0 COMPASS-like H3K4 histone methylase component WDR5A4.86e-5188.78Show/hide
Query:  TLTGYNRAISSVKFSADGRLLGSSSADKTLRTYACSNSILTPLQEFRGHEQGVSDLAFSSDSRLLVSASDDKTPRLWDVSSGSLIKTLNGHTNHVLCV
        TLTG+ RAISSVKFSADGRLLGSSSADKTLRTY+CSNS LTPL EF+GHEQGVSDLAFSSDSR LVSASDDKT RLWDVS+GSLIKTLNGHTN+V CV
Subjt:  TLTGYNRAISSVKFSADGRLLGSSSADKTLRTYACSNSILTPLQEFRGHEQGVSDLAFSSDSRLLVSASDDKTPRLWDVSSGSLIKTLNGHTNHVLCV

SwissProt top hitse value%identityAlignment
P61964 WD repeat-containing protein 53.4e-2253.06Show/hide
Query:  WTLTGYNRAISSVKFSADGRLLGSSSADKTLRTYACSNSILTPLQEFRGHEQGVSDLAFSSDSRLLVSASDDKTPRLWDVSSGSLIKTLNGHTNHVLC
        +TL G+ +A+SSVKFS +G  L SSSADK ++ +   +      +   GH+ G+SD+A+SSDS LLVSASDDKT ++WDVSSG  +KTL GH+N+V C
Subjt:  WTLTGYNRAISSVKFSADGRLLGSSSADKTLRTYACSNSILTPLQEFRGHEQGVSDLAFSSDSRLLVSASDDKTPRLWDVSSGSLIKTLNGHTNHVLC

P61965 WD repeat-containing protein 53.4e-2253.06Show/hide
Query:  WTLTGYNRAISSVKFSADGRLLGSSSADKTLRTYACSNSILTPLQEFRGHEQGVSDLAFSSDSRLLVSASDDKTPRLWDVSSGSLIKTLNGHTNHVLC
        +TL G+ +A+SSVKFS +G  L SSSADK ++ +   +      +   GH+ G+SD+A+SSDS LLVSASDDKT ++WDVSSG  +KTL GH+N+V C
Subjt:  WTLTGYNRAISSVKFSADGRLLGSSSADKTLRTYACSNSILTPLQEFRGHEQGVSDLAFSSDSRLLVSASDDKTPRLWDVSSGSLIKTLNGHTNHVLC

Q2KIG2 WD repeat-containing protein 53.4e-2253.06Show/hide
Query:  WTLTGYNRAISSVKFSADGRLLGSSSADKTLRTYACSNSILTPLQEFRGHEQGVSDLAFSSDSRLLVSASDDKTPRLWDVSSGSLIKTLNGHTNHVLC
        +TL G+ +A+SSVKFS +G  L SSSADK ++ +   +      +   GH+ G+SD+A+SSDS LLVSASDDKT ++WDVSSG  +KTL GH+N+V C
Subjt:  WTLTGYNRAISSVKFSADGRLLGSSSADKTLRTYACSNSILTPLQEFRGHEQGVSDLAFSSDSRLLVSASDDKTPRLWDVSSGSLIKTLNGHTNHVLC

Q498M4 WD repeat-containing protein 53.4e-2253.06Show/hide
Query:  WTLTGYNRAISSVKFSADGRLLGSSSADKTLRTYACSNSILTPLQEFRGHEQGVSDLAFSSDSRLLVSASDDKTPRLWDVSSGSLIKTLNGHTNHVLC
        +TL G+ +A+SSVKFS +G  L SSSADK ++ +   +      +   GH+ G+SD+A+SSDS LLVSASDDKT ++WDVSSG  +KTL GH+N+V C
Subjt:  WTLTGYNRAISSVKFSADGRLLGSSSADKTLRTYACSNSILTPLQEFRGHEQGVSDLAFSSDSRLLVSASDDKTPRLWDVSSGSLIKTLNGHTNHVLC

Q9M2Z2 COMPASS-like H3K4 histone methylase component WDR5A3.7e-3267.33Show/hide
Query:  TLTGYNRAISSVKFSADGRLLGSSSADKTLRTY---ACSNSILTPLQEFRGHEQGVSDLAFSSDSRLLVSASDDKTPRLWDVSSGSLIKTLNGHTNHVLC
        TLT +NRA+SSVKFS+DGRLL S+SADKT+RTY     ++ I  P+QEF GHE G+SD+AFSSD+R +VSASDDKT +LWDV +GSLIKTL GHTN+  C
Subjt:  TLTGYNRAISSVKFSADGRLLGSSSADKTLRTY---ACSNSILTPLQEFRGHEQGVSDLAFSSDSRLLVSASDDKTPRLWDVSSGSLIKTLNGHTNHVLC

Query:  V
        V
Subjt:  V

Arabidopsis top hitse value%identityAlignment
AT1G73720.1 transducin family protein / WD-40 repeat family protein1.5e-0935.71Show/hide
Query:  VKFSADGRLLGSSSADKTLRTYACSNSILTPLQEFRGHEQGVSDLAFSSDSRLLVSASDDKTPRLWDVSSGSLIKTLNGHTNHV
        + FS D  +L S S D  ++ +     +   ++ F  H QGV+ L+FS D   L+S S D+T R+  + SG L+K   GHT++V
Subjt:  VKFSADGRLLGSSSADKTLRTYACSNSILTPLQEFRGHEQGVSDLAFSSDSRLLVSASDDKTPRLWDVSSGSLIKTLNGHTNHV

AT2G43770.1 Transducin/WD40 repeat-like superfamily protein5.3e-1034.62Show/hide
Query:  LTGYNRAISSVKFSADGRLLGSSSADKTLRTYA----CSNSILTPLQEFRGHEQGVSDLAFSSDSRLLVSASDDKTPRLWDVSSGSLIKTLNGHTNHVLC
        L+G+  A+ ++KF+  G L+ S S D+ +  +     C N ++      +GH+  + DL ++SD   +VSAS DKT R WDV +G  IK +  H++ V  
Subjt:  LTGYNRAISSVKFSADGRLLGSSSADKTLRTYA----CSNSILTPLQEFRGHEQGVSDLAFSSDSRLLVSASDDKTPRLWDVSSGSLIKTLNGHTNHVLC

Query:  VVCC
          CC
Subjt:  VVCC

AT3G49660.1 Transducin/WD40 repeat-like superfamily protein2.6e-3367.33Show/hide
Query:  TLTGYNRAISSVKFSADGRLLGSSSADKTLRTY---ACSNSILTPLQEFRGHEQGVSDLAFSSDSRLLVSASDDKTPRLWDVSSGSLIKTLNGHTNHVLC
        TLT +NRA+SSVKFS+DGRLL S+SADKT+RTY     ++ I  P+QEF GHE G+SD+AFSSD+R +VSASDDKT +LWDV +GSLIKTL GHTN+  C
Subjt:  TLTGYNRAISSVKFSADGRLLGSSSADKTLRTY---ACSNSILTPLQEFRGHEQGVSDLAFSSDSRLLVSASDDKTPRLWDVSSGSLIKTLNGHTNHVLC

Query:  V
        V
Subjt:  V

AT4G02730.1 Transducin/WD40 repeat-like superfamily protein9.6e-2051.52Show/hide
Query:  TLTGYNRAISSVKFSADGRLLGSSSADKTLRTYACSNSILTPLQEFRGHEQGVSDLAFSSDSRLLVSASDDKTPRLWDVSSG-SLIKTLNGHTNHVLCV
        TL G+  AIS VKFS DG LL S+S DKT+  ++ +N  L  +  + GH  G+SDLA+SSDS    SASDD T R+WD  S    +K L GHTN V CV
Subjt:  TLTGYNRAISSVKFSADGRLLGSSSADKTLRTYACSNSILTPLQEFRGHEQGVSDLAFSSDSRLLVSASDDKTPRLWDVSSG-SLIKTLNGHTNHVLCV

AT5G52820.1 WD-40 repeat family protein / notchless protein, putative1.6e-1137.76Show/hide
Query:  LTGYNRAISSVKFSADGRLLGSSSADKTLRTYACSNSILTP-LQEFRGHEQGVSDLAFSSDSRLLVSASDDKTPRLWDVSSGSLIKTLNGHTNHVLCV
        LTG+ + ++ V FS DG+ + S+S DK++R +   N I    +  FRGH   V  +++S+DSRLL+S S D T ++W++ +  L + L GH + V  V
Subjt:  LTGYNRAISSVKFSADGRLLGSSSADKTLRTYACSNSILTP-LQEFRGHEQGVSDLAFSSDSRLLVSASDDKTPRLWDVSSGSLIKTLNGHTNHVLCV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTGTGTTATCGAAAGCAATCACCTGGTGCTTTGCTCCATTTTCTGCTATTGGACCCTAACTGGCTACAATCGAGCGATTTCATCCGTCAAATTCTCAGCTGATGG
ACGTCTTCTTGGTTCTTCCTCCGCCGATAAGACCCTTCGCACCTATGCTTGCTCAAATTCCATTCTGACCCCTCTCCAAGAGTTCAGAGGCCATGAACAGGGTGTCTCCG
ATTTAGCTTTCTCCTCTGATTCTCGTTTACTTGTATCGGCCTCCGACGATAAGACTCCTCGTCTCTGGGATGTGTCTTCTGGGTCCCTTATCAAGACGCTTAATGGCCAT
ACTAACCATGTGTTGTGTGTTGTGTGTTGTGTGTTACCTTCAATCCCCAATCCAACATGA
mRNA sequenceShow/hide mRNA sequence
ATGAATTGTGTTATCGAAAGCAATCACCTGGTGCTTTGCTCCATTTTCTGCTATTGGACCCTAACTGGCTACAATCGAGCGATTTCATCCGTCAAATTCTCAGCTGATGG
ACGTCTTCTTGGTTCTTCCTCCGCCGATAAGACCCTTCGCACCTATGCTTGCTCAAATTCCATTCTGACCCCTCTCCAAGAGTTCAGAGGCCATGAACAGGGTGTCTCCG
ATTTAGCTTTCTCCTCTGATTCTCGTTTACTTGTATCGGCCTCCGACGATAAGACTCCTCGTCTCTGGGATGTGTCTTCTGGGTCCCTTATCAAGACGCTTAATGGCCAT
ACTAACCATGTGTTGTGTGTTGTGTGTTGTGTGTTACCTTCAATCCCCAATCCAACATGA
Protein sequenceShow/hide protein sequence
MNCVIESNHLVLCSIFCYWTLTGYNRAISSVKFSADGRLLGSSSADKTLRTYACSNSILTPLQEFRGHEQGVSDLAFSSDSRLLVSASDDKTPRLWDVSSGSLIKTLNGH
TNHVLCVVCCVLPSIPNPT