; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Csor.00g127480 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g127480
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: cultured cell;
Genome locationCsor_Chr07:6803223..6805718
RNA-Seq ExpressionCsor.00g127480
SyntenyCsor.00g127480
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595527.1 hypothetical protein SDJN03_12080, partial [Cucurbita argyrosperma subsp. sororia]5.05e-60100Show/hide
Query:  MNHKVDGKVLENQNSSHSWSSSAAVFKTGDSENLLNGTGTIIVLTSFKMHKGEKGIMCIGFLKRAREEKETAKDRIVNDLQDLESQKQELERLLISETV
        MNHKVDGKVLENQNSSHSWSSSAAVFKTGDSENLLNGTGTIIVLTSFKMHKGEKGIMCIGFLKRAREEKETAKDRIVNDLQDLESQKQELERLLISETV
Subjt:  MNHKVDGKVLENQNSSHSWSSSAAVFKTGDSENLLNGTGTIIVLTSFKMHKGEKGIMCIGFLKRAREEKETAKDRIVNDLQDLESQKQELERLLISETV
XP_004147506.1 uncharacterized protein LOC101214901 [Cucumis sativus]3.20e-1382.22Show/hide
Query:  GIMCIGFLKRAREEKETAKDRIVNDLQDLESQKQELERLLISETV
        GI+CIGFLKRARE+KETAKD++V DLQ+LE QKQELE+LLISETV
Subjt:  GIMCIGFLKRAREEKETAKDRIVNDLQDLESQKQELERLLISETV
XP_008454462.1 PREDICTED: uncharacterized protein LOC103494861 [Cucumis melo]3.09e-1382.22Show/hide
Query:  GIMCIGFLKRAREEKETAKDRIVNDLQDLESQKQELERLLISETV
        GI+CIGFLKRARE+KETAKD++V DLQ+LE QKQELE+LLISETV
Subjt:  GIMCIGFLKRAREEKETAKDRIVNDLQDLESQKQELERLLISETV
XP_038905258.1 uncharacterized protein LOC120091338 isoform X1 [Benincasa hispida]2.64e-1486.67Show/hide
Query:  GIMCIGFLKRAREEKETAKDRIVNDLQDLESQKQELERLLISETV
        GI+CIGFLKRAREEKETAKDR+V DLQ+LE QKQELE+LLISETV
Subjt:  GIMCIGFLKRAREEKETAKDRIVNDLQDLESQKQELERLLISETV
XP_038905259.1 uncharacterized protein LOC120091338 isoform X2 [Benincasa hispida]2.64e-1486.67Show/hide
Query:  GIMCIGFLKRAREEKETAKDRIVNDLQDLESQKQELERLLISETV
        GI+CIGFLKRAREEKETAKDR+V DLQ+LE QKQELE+LLISETV
Subjt:  GIMCIGFLKRAREEKETAKDRIVNDLQDLESQKQELERLLISETV
TrEMBL top hitse value%identityAlignment
A0A0A0KYH6 Uncharacterized protein1.55e-1382.22Show/hide
Query:  GIMCIGFLKRAREEKETAKDRIVNDLQDLESQKQELERLLISETV
        GI+CIGFLKRARE+KETAKD++V DLQ+LE QKQELE+LLISETV
Subjt:  GIMCIGFLKRAREEKETAKDRIVNDLQDLESQKQELERLLISETV
A0A1S3BY74 uncharacterized protein LOC1034948611.49e-1382.22Show/hide
Query:  GIMCIGFLKRAREEKETAKDRIVNDLQDLESQKQELERLLISETV
        GI+CIGFLKRARE+KETAKD++V DLQ+LE QKQELE+LLISETV
Subjt:  GIMCIGFLKRAREEKETAKDRIVNDLQDLESQKQELERLLISETV
A0A6J1D697 uncharacterized protein LOC1110177043.72e-1161.19Show/hide
Query:  LLNGTGTIIVLTSFKMHKGEKGIMCIGFLKRAREEKETAKDRIVNDLQDLESQKQELER-LLISETV
        LL G G + V +         GI+C+GFLKRAREEKETAK+R V DLQ+LE QKQELER LLI+E+V
Subjt:  LLNGTGTIIVLTSFKMHKGEKGIMCIGFLKRAREEKETAKDRIVNDLQDLESQKQELER-LLISETV
A0A6J1E3M8 uncharacterized protein LOC1114304984.21e-1380Show/hide
Query:  GIMCIGFLKRAREEKETAKDRIVNDLQDLESQKQELERLLISETV
        GI+CIGFLKRAREEKET+KDR+V DLQ+LE QKQELE+LLIS++V
Subjt:  GIMCIGFLKRAREEKETAKDRIVNDLQDLESQKQELERLLISETV
A0A6J1J849 uncharacterized protein LOC1114826124.21e-1380Show/hide
Query:  GIMCIGFLKRAREEKETAKDRIVNDLQDLESQKQELERLLISETV
        GI+CIGFLKRAREEKET+KDR+V DLQ+LE QKQELE+LLIS++V
Subjt:  GIMCIGFLKRAREEKETAKDRIVNDLQDLESQKQELERLLISETV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G33625.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Golgi apparatus membrane protein TVP15 (InterPro:IPR013714); Has 59 Blast hits to 59 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).7.2e-0751.22Show/hide
Query:  GIMCIGFLKRAREEKETAKDRIVNDLQDLESQKQELERLLI
        G++CIGFLKRAR++KE ++++ V DL+++  +K+ELE+LL+
Subjt:  GIMCIGFLKRAREEKETAKDRIVNDLQDLESQKQELERLLI
AT4G33625.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Golgi apparatus membrane protein TVP15 (InterPro:IPR013714); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).2.3e-0551.22Show/hide
Query:  GIMCIGFLKRAREEKETAKDRIVNDLQDLESQKQELERLLI
        G++CIGFLKRAR++KE ++++ V DL ++  +K+ELE+LL+
Subjt:  GIMCIGFLKRAREEKETAKDRIVNDLQDLESQKQELERLLI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCACAAGGTGGATGGAAAGGTATTGGAGAACCAAAATTCAAGTCACTCTTGGTCTTCTTCTGCTGCTGTCTTCAAAACGGGGGATTCTGAAAATTTATTAAATGG
GACAGGAACAATAATAGTATTAACCAGCTTCAAAATGCACAAGGGGGAGAAGGGAATAATGTGCATTGGGTTTCTCAAACGTGCTCGTGAAGAGAAAGAGACCGCAAAGG
ACAGGATTGTCAATGATCTTCAGGATTTGGAAAGTCAAAAACAAGAACTTGAACGGTTGCTCATTTCAGAAACTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACCACAAGGTGGATGGAAAGGTATTGGAGAACCAAAATTCAAGTCACTCTTGGTCTTCTTCTGCTGCTGTCTTCAAAACGGGGGATTCTGAAAATTTATTAAATGG
GACAGGAACAATAATAGTATTAACCAGCTTCAAAATGCACAAGGGGGAGAAGGGAATAATGTGCATTGGGTTTCTCAAACGTGCTCGTGAAGAGAAAGAGACCGCAAAGG
ACAGGATTGTCAATGATCTTCAGGATTTGGAAAGTCAAAAACAAGAACTTGAACGGTTGCTCATTTCAGAAACTGTTTGA
Protein sequenceShow/hide protein sequence
MNHKVDGKVLENQNSSHSWSSSAAVFKTGDSENLLNGTGTIIVLTSFKMHKGEKGIMCIGFLKRAREEKETAKDRIVNDLQDLESQKQELERLLISETV