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Csor.00g140010 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g140010
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionTransmembrane protein
Genome locationCsor_Chr01:14097195..14097488
RNA-Seq ExpressionCsor.00g140010
SyntenyCsor.00g140010
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608573.1 hypothetical protein SDJN03_01915, partial [Cucurbita argyrosperma subsp. sororia]7.82e-63100Show/hide
Query:  MAGVTLASFLYSLFFGVMTFTIITALSKTAAGSRLLSPLSAAPSTTPHGIHESEVKGDHSRFKVLSEIVADYGYWNPTPVFGGGYADPIPHEVQARP
        MAGVTLASFLYSLFFGVMTFTIITALSKTAAGSRLLSPLSAAPSTTPHGIHESEVKGDHSRFKVLSEIVADYGYWNPTPVFGGGYADPIPHEVQARP
Subjt:  MAGVTLASFLYSLFFGVMTFTIITALSKTAAGSRLLSPLSAAPSTTPHGIHESEVKGDHSRFKVLSEIVADYGYWNPTPVFGGGYADPIPHEVQARP

KGN55706.1 hypothetical protein Csa_010844 [Cucumis sativus]3.43e-0948.65Show/hide
Query:  MTFTIITALSKTAAGSRLLSPLSAAPSTTPHGIHESEVKGDHSRFKVLSEIVADYGYWNPTPVFGGGYADPIPH
        M FTIIT +S T A           PST  +G +E +VKGD    K  SEIV DY  W+P P+FGGG A  IPH
Subjt:  MTFTIITALSKTAAGSRLLSPLSAAPSTTPHGIHESEVKGDHSRFKVLSEIVADYGYWNPTPVFGGGYADPIPH

PON51988.1 Transmembrane protein [Parasponia andersonii]2.31e-0739.51Show/hide
Query:  VMTFTIITALSKTAAGSR-LLSPLSAAPSTTPHGIHESEV-----KGDHSRFKVLSEIVADYGYWNPTPVFGGGYADPIPH
        ++   I+T +S  AA  +  L P+  APS +   +   E      + +HS F+   E + DYG+WNPTP FGGG+A PIPH
Subjt:  VMTFTIITALSKTAAGSR-LLSPLSAAPSTTPHGIHESEV-----KGDHSRFKVLSEIVADYGYWNPTPVFGGGYADPIPH

PON91008.1 Transmembrane protein [Trema orientale]4.15e-0840.24Show/hide
Query:  VMTFTIITALSKTAAGSR-LLSPLSAAPSTTPHGIHESEV-----KGDHSRFKVLSEIVADYGYWNPTPVFGGGYADPIPHE
        ++   I+T LS TAA  +  L P+  APS +   +   E      + +H+ F    E + DYG+WNPTP FGGG+A PIPH 
Subjt:  VMTFTIITALSKTAAGSR-LLSPLSAAPSTTPHGIHESEV-----KGDHSRFKVLSEIVADYGYWNPTPVFGGGYADPIPHE

XP_010552801.1 PREDICTED: uncharacterized protein LOC104823071 [Tarenaya hassleriana]5.27e-0637.5Show/hide
Query:  MTFTIITALSKTAAGSRLLSPL-----SAAPSTTPHGIHESEVKGDHSRFK-VLSEIVADYGYWNPTPVFGGGYADP--IPHEVQARP
        M   +ITAL+    G R+ + L     +++PS    G+           +K V  E  +DYG+WNPTPV+GGG+ +P  IPH   ARP
Subjt:  MTFTIITALSKTAAGSRLLSPL-----SAAPSTTPHGIHESEVKGDHSRFK-VLSEIVADYGYWNPTPVFGGGYADP--IPHEVQARP

TrEMBL top hitse value%identityAlignment
A0A0A0L6C3 Uncharacterized protein1.66e-0948.65Show/hide
Query:  MTFTIITALSKTAAGSRLLSPLSAAPSTTPHGIHESEVKGDHSRFKVLSEIVADYGYWNPTPVFGGGYADPIPH
        M FTIIT +S T A           PST  +G +E +VKGD    K  SEIV DY  W+P P+FGGG A  IPH
Subjt:  MTFTIITALSKTAAGSRLLSPLSAAPSTTPHGIHESEVKGDHSRFKVLSEIVADYGYWNPTPVFGGGYADPIPH

A0A0D2U6Q1 Uncharacterized protein7.83e-0641.67Show/hide
Query:  LSPLSAAPSTTPHGIHESEVKGDHS--RFKVLSEIVADYGYWNPTPVFGGGYADPIPHEV
        LSP S+A S + + I   E++G      ++  +  V DYG WNPTP  GG YA P+PH  
Subjt:  LSPLSAAPSTTPHGIHESEVKGDHS--RFKVLSEIVADYGYWNPTPVFGGGYADPIPHEV

A0A2P5BT75 Transmembrane protein1.12e-0739.51Show/hide
Query:  VMTFTIITALSKTAAGSR-LLSPLSAAPSTTPHGIHESEV-----KGDHSRFKVLSEIVADYGYWNPTPVFGGGYADPIPH
        ++   I+T +S  AA  +  L P+  APS +   +   E      + +HS F+   E + DYG+WNPTP FGGG+A PIPH
Subjt:  VMTFTIITALSKTAAGSR-LLSPLSAAPSTTPHGIHESEV-----KGDHSRFKVLSEIVADYGYWNPTPVFGGGYADPIPH

A0A2P5EZP1 Transmembrane protein2.01e-0840.24Show/hide
Query:  VMTFTIITALSKTAAGSR-LLSPLSAAPSTTPHGIHESEV-----KGDHSRFKVLSEIVADYGYWNPTPVFGGGYADPIPHE
        ++   I+T LS TAA  +  L P+  APS +   +   E      + +H+ F    E + DYG+WNPTP FGGG+A PIPH 
Subjt:  VMTFTIITALSKTAAGSR-LLSPLSAAPSTTPHGIHESEV-----KGDHSRFKVLSEIVADYGYWNPTPVFGGGYADPIPHE

A0A7J9MC45 Uncharacterized protein5.55e-0641.67Show/hide
Query:  LSPLSAAPSTTPHGIHESEVKGDHS--RFKVLSEIVADYGYWNPTPVFGGGYADPIPHEV
        LSP S+A S + + I   E++G      ++  +  V DYG WNPTP  GG YA P+PH  
Subjt:  LSPLSAAPSTTPHGIHESEVKGDHS--RFKVLSEIVADYGYWNPTPVFGGGYADPIPHEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G28375.1 unknown protein8.6e-0555.17Show/hide
Query:  LSEIVADYGYWNPTPVFGGG--YADPIPH
        L ++  DYG+WNP+PV+GGG  Y  P+PH
Subjt:  LSEIVADYGYWNPTPVFGGG--YADPIPH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGGAGTGACACTTGCTTCCTTTCTTTATTCTTTATTCTTCGGTGTAATGACGTTCACTATAATAACAGCATTATCCAAAACAGCTGCAGGATCACGTTTGTTGTC
GCCATTATCAGCGGCACCCTCGACAACCCCTCATGGCATCCATGAATCTGAGGTGAAGGGAGATCACAGTCGTTTCAAGGTTCTGTCAGAAATTGTAGCAGACTACGGGT
ACTGGAACCCAACCCCTGTGTTTGGAGGAGGATATGCAGACCCCATTCCCCATGAAGTCCAAGCAAGACCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGGAGTGACACTTGCTTCCTTTCTTTATTCTTTATTCTTCGGTGTAATGACGTTCACTATAATAACAGCATTATCCAAAACAGCTGCAGGATCACGTTTGTTGTC
GCCATTATCAGCGGCACCCTCGACAACCCCTCATGGCATCCATGAATCTGAGGTGAAGGGAGATCACAGTCGTTTCAAGGTTCTGTCAGAAATTGTAGCAGACTACGGGT
ACTGGAACCCAACCCCTGTGTTTGGAGGAGGATATGCAGACCCCATTCCCCATGAAGTCCAAGCAAGACCCTGA
Protein sequenceShow/hide protein sequence
MAGVTLASFLYSLFFGVMTFTIITALSKTAAGSRLLSPLSAAPSTTPHGIHESEVKGDHSRFKVLSEIVADYGYWNPTPVFGGGYADPIPHEVQARP