CuGenDBv2

Gene ID	Csor.00g149090
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	cyclic phosphodiesterase-like
Genome location	Csor_Chr14:5423892..5425126
RNA-Seq Expression	Csor.00g149090
Synteny	Csor.00g149090
Gene Ontology terms	GO:0009187 - cyclic nucleotide metabolic process (biological process) GO:0004113 - 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity (molecular function)
InterPro domains	IPR009097 - Cyclic phosphodiesterase IPR012386 - 2',3'-cyclic-nucleotide 3'-phosphodiesterase

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6581386.1 Cyclic phosphodiesterase, partial [Cucurbita argyrosperma subsp. sororia]

8.18e-140

100

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Query:  MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIRLTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLL
        MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIRLTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLL
Subjt:  MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIRLTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLL

Query:  IHPTTKVVETSSHCCGHFGYNNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKSWEKIAEQDLPSS
        IHPTTKVVETSSHCCGHFGYNNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKSWEKIAEQDLPSS
Subjt:  IHPTTKVVETSSHCCGHFGYNNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKSWEKIAEQDLPSS

KAG7034670.1 Cyclic phosphodiesterase, partial [Cucurbita argyrosperma subsp. argyrosperma]

7.86e-138

98.96

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Query:  MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIRLTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLL
        MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIRLTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLL
Subjt:  MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIRLTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLL

Query:  IHPTTKVVETSSHCCGHFGYNNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKSWEKIAEQDLPSS
        IHPTT+VVETSSHCCGHFG NNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKSWEKIAEQDLPSS
Subjt:  IHPTTKVVETSSHCCGHFGYNNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKSWEKIAEQDLPSS

XP_022978766.1 cyclic phosphodiesterase-like [Cucurbita maxima]

5.31e-136

97.4

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Query:  MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIRLTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLL
        MANPES  IQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIRLTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLL
Subjt:  MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIRLTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLL

Query:  IHPTTKVVETSSHCCGHFGYNNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKSWEKIAEQDLPSS
        IHPTT+VVETSSHCCGHFGY NSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFP+TRLALYKTDTGDETLKSWEKIAEQDLPSS
Subjt:  IHPTTKVVETSSHCCGHFGYNNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKSWEKIAEQDLPSS

XP_023522563.1 cyclic phosphodiesterase-like [Cucurbita pepo subsp. pepo]

2.25e-137

98.44

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Query:  MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIRLTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLL
        MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIRLTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLL
Subjt:  MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIRLTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLL

Query:  IHPTTKVVETSSHCCGHFGYNNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKSWEKIAEQDLPSS
        IHPT +VVETSSHCCGHFGY NSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKSWEKIAEQDLPSS
Subjt:  IHPTTKVVETSSHCCGHFGYNNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKSWEKIAEQDLPSS

XP_023543945.1 cyclic phosphodiesterase-like isoform X2 [Cucurbita pepo subsp. pepo]

2.74e-138

98.96

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Query:  MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIRLTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLL
        MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIRLTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLL
Subjt:  MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIRLTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLL

Query:  IHPTTKVVETSSHCCGHFGYNNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKSWEKIAEQDLPSS
        IHPTT+VVETSSHCCGHFGY NSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKSWEKIAEQDLPSS
Subjt:  IHPTTKVVETSSHCCGHFGYNNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKSWEKIAEQDLPSS

TrEMBL top hits

e value

%identity

Alignment

A0A1S3AYZ1 cyclic phosphodiesterase-like

4.67e-114

82.81

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Query:  MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIRLTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLL
        M NPES  IQ SE E NVYSVWALPPEDV+ARI  LMNSLRSEFGGPQFEPHITVVGAIRLT +DALNKF +AC+G+KAYQATVD VSTGTFFYQCVFLL
Subjt:  MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIRLTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLL

Query:  IHPTTKVVETSSHCCGHFGYNNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKSWEKIAEQDLPSS
        IHPTT+VVETSSH C HFG+ NSTPYMPH+SLLYA+ISDE+KKQAKE+A+KLDEA+NGL FPITRLAL+KTDT DETLKSWEKI E DL SS
Subjt:  IHPTTKVVETSSHCCGHFGYNNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKSWEKIAEQDLPSS

A0A6J1EEQ8 cyclic phosphodiesterase-like

2.16e-114

82.81

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Query:  MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIRLTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLL
        MANP S PI+P EGE  +YSVWALPPEDV  +I +LM+SLRSEFGGP+FEPHITVVGAIRLT  DALNKFRSACEG+KAYQATVD VS GT FYQCVFLL
Subjt:  MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIRLTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLL

Query:  IHPTTKVVETSSHCCGHFGYNNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKSWEKIAEQDLPSS
        IHPTT+VV+ SSHCCGHFGYNNSTPYMPHLSLLYANISDE KK+AKE+A+KL+EA+NGL  P+TRLALYKTDTGDETLKSWEKIAE DLPSS
Subjt:  IHPTTKVVETSSHCCGHFGYNNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKSWEKIAEQDLPSS

A0A6J1EGC1 cyclic phosphodiesterase-like

2.90e-135

97.92

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Query:  MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIRLTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLL
        MANPESTPIQPSEGEKNVYSVWALPPEDV ARIRTLMNSLRSEFGGPQFEPHITVVGAIRLTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLL
Subjt:  MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIRLTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLL

Query:  IHPTTKVVETSSHCCGHFGYNNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKSWEKIAEQDLPSS
        IHPTT+VVETSSHCCGHFGY N TPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKSWEKIAEQDLPSS
Subjt:  IHPTTKVVETSSHCCGHFGYNNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKSWEKIAEQDLPSS

A0A6J1INY2 cyclic phosphodiesterase-like

2.57e-136

97.4

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Query:  MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIRLTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLL
        MANPES  IQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIRLTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLL
Subjt:  MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIRLTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLL

Query:  IHPTTKVVETSSHCCGHFGYNNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKSWEKIAEQDLPSS
        IHPTT+VVETSSHCCGHFGY NSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFP+TRLALYKTDTGDETLKSWEKIAEQDLPSS
Subjt:  IHPTTKVVETSSHCCGHFGYNNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKSWEKIAEQDLPSS

A0A6J1KNB2 cyclic phosphodiesterase-like

7.21e-113

82.29

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Query:  MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIRLTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLL
        MANP S PI+P EGE  +YSVWALPPEDV  +I +LM+SLRSEFGGP+FEPHITVVGAIRLT  DALNKFRSACEG+KAYQATVD VS GT FYQCVFLL
Subjt:  MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIRLTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLL

Query:  IHPTTKVVETSSHCCGHFGYNNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKSWEKIAEQDLPSS
        IHPTT+VV+ SSHCCGHFG NNSTPYMPHLSLLYANISDE KK+AKE+A+KL+EA+NGL  P+TRLALYKTDTGDETLKSWEKIAE DLPSS
Subjt:  IHPTTKVVETSSHCCGHFGYNNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKSWEKIAEQDLPSS

SwissProt top hits

e value

%identity

Alignment

O04147 Cyclic phosphodiesterase

6.0e-55

58.38

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Query:  EGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIRLTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLLIHPTTKVVETSS
        E +K+VYSVWALP E+   R + LM +LRSEF GP+F PH+TV  +  LT D+A   F SAC+GLKAY ATVD VSTGTFF+QCVFLL+  T +V+E   
Subjt:  EGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIRLTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLLIHPTTKVVETSS

Query:  HCCGHFGYNNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKSWEKIA
        HC  HF  + +TPYMPHLSLLYA +++E+KK A+E A  LD +++GLSF + RLAL KTDT D+TL++WE +A
Subjt:  HCCGHFGYNNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKSWEKIA

Arabidopsis top hits

e value

%identity

Alignment

AT4G18930.1 RNA ligase/cyclic nucleotide phosphodiesterase family protein

4.3e-56

58.38

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Query:  EGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIRLTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLLIHPTTKVVETSS
        E +K+VYSVWALP E+   R + LM +LRSEF GP+F PH+TV  +  LT D+A   F SAC+GLKAY ATVD VSTGTFF+QCVFLL+  T +V+E   
Subjt:  EGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIRLTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLLIHPTTKVVETSS

Query:  HCCGHFGYNNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKSWEKIA
        HC  HF  + +TPYMPHLSLLYA +++E+KK A+E A  LD +++GLSF + RLAL KTDT D+TL++WE +A
Subjt:  HCCGHFGYNNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKSWEKIA

AT4G18940.1 RNA ligase/cyclic nucleotide phosphodiesterase family protein

9.2e-43

42.71

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Query:  MANPESTPIQP------SEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAI--RLTLDDALNKFRSACEGLKAYQATVDCVSTGTF
        M    +TP+QP       E EK +Y++WA+P +DV  R++ LM  LRSEFGGP F+PH+T+VG    +LT  +A   F+SACEG K Y ATVD VS GT 
Subjt:  MANPESTPIQP------SEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAI--RLTLDDALNKFRSACEGLKAYQATVDCVSTGTF

Query:  FYQCVFLLIHPTTKVVETSSHCCGHFGYNNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKSWEKIAEQDLPS
        ++QC+++ +  T +V+  + H   HF       Y+PH+S+LY ++++ +KK+A E A  LD +++GL+F I R+AL+ TD     + SW K+ E  L S
Subjt:  FYQCVFLLIHPTTKVVETSSHCCGHFGYNNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKSWEKIAEQDLPS

Sequences

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CDS sequence

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ATGGCGAACCCAGAATCCACCCCTATCCAACCCTCTGAAGGGGAGAAGAACGTGTATTCGGTCTGGGCTCTTCCTCCAGAAGATGTTACGGCCAGAATCAGGACTCTCAT
GAACAGCCTCAGATCCGAGTTCGGCGGGCCCCAATTCGAGCCACATATCACTGTCGTTGGGGCTATTCGTCTCACCCTTGACGATGCCCTCAACAAATTTCGCTCGGCTT
GCGAGGGGCTTAAGGCTTATCAAGCCACCGTCGATTGTGTATCTACCGGAACCTTCTTCTACCAGTGTGTTTTTCTCCTTATTCATCCTACCACTAAGGTGGTGGAGACT
AGTTCACATTGCTGTGGACATTTTGGTTACAACAACTCTACCCCTTACATGCCGCATTTGAGCCTTCTGTATGCCAACATATCAGATGAACAAAAGAAGCAGGCAAAAGA
ACTAGCAGAGAAGCTGGACGAAGCCATTAATGGCCTGAGCTTCCCCATCACTCGTCTTGCACTATACAAAACAGACACTGGAGATGAAACTCTGAAGTCCTGGGAGAAAA
TTGCAGAACAGGATCTTCCTTCAAGTTAA

mRNA sequence

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Protein sequence

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MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIRLTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLLIHPTTKVVET
SSHCCGHFGYNNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKSWEKIAEQDLPSS

Csor.00g149090 (gene) of Silver-seed gourd (wild; sororia) v1 genome