; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Csor.00g150830 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g150830
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Descriptionleucine-rich repeat extensin-like protein 3
Genome locationCsor_Chr14:4519023..4519454
RNA-Seq ExpressionCsor.00g150830
SyntenyCsor.00g150830
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060761.1 formin-like protein 3 [Cucumis melo var. makuwa]1.87e-5670.07Show/hide
Query:  MAPSAAIPLSLSFLFLFLHLADSQPVSPV--DLQDPNSEIKCGSCPCSNPCVKQFPPPPPPPPPPN-CKPALPPPPPPPRFIYTSLSP-PPPPRFIYTTG
        M  SAAI LS SFL L L LA SQ  SP+  D Q+P++EIKCGSCPCSNPC++Q  PPPPPPPPP+ C P +   PPPPRFIYT  SP PPPPRF YTTG
Subjt:  MAPSAAIPLSLSFLFLFLHLADSQPVSPV--DLQDPNSEIKCGSCPCSNPCVKQFPPPPPPPPPPN-CKPALPPPPPPPRFIYTSLSP-PPPPRFIYTTG

Query:  VPGNLYQIDANNRWYYFSGTTRNQPATAALVVALGCGALNLMAFGKW
        VPGNLY+IDANN WYYFSGTT  +P  AA+VVALGCGAL+LM F KW
Subjt:  VPGNLYQIDANNRWYYFSGTTRNQPATAALVVALGCGALNLMAFGKW

KAG6581215.1 hypothetical protein SDJN03_21217, partial [Cucurbita argyrosperma subsp. sororia]1.37e-96100Show/hide
Query:  MAPSAAIPLSLSFLFLFLHLADSQPVSPVDLQDPNSEIKCGSCPCSNPCVKQFPPPPPPPPPPNCKPALPPPPPPPRFIYTSLSPPPPPRFIYTTGVPGN
        MAPSAAIPLSLSFLFLFLHLADSQPVSPVDLQDPNSEIKCGSCPCSNPCVKQFPPPPPPPPPPNCKPALPPPPPPPRFIYTSLSPPPPPRFIYTTGVPGN
Subjt:  MAPSAAIPLSLSFLFLFLHLADSQPVSPVDLQDPNSEIKCGSCPCSNPCVKQFPPPPPPPPPPNCKPALPPPPPPPRFIYTSLSPPPPPRFIYTTGVPGN

Query:  LYQIDANNRWYYFSGTTRNQPATAALVVALGCGALNLMAFGKW
        LYQIDANNRWYYFSGTTRNQPATAALVVALGCGALNLMAFGKW
Subjt:  LYQIDANNRWYYFSGTTRNQPATAALVVALGCGALNLMAFGKW

KAG7017949.1 hypothetical protein SDJN02_19815, partial [Cucurbita argyrosperma subsp. argyrosperma]4.64e-9297.2Show/hide
Query:  MAPSAAIPLSLSFLFLFLHLADSQPVSPVDLQDPNSEIKCGSCPCSNPCVKQFPPPPPPPPPPNCKPALPPPPPPPRFIYTSLSPPPPPRFIYTTGVPGN
        MAPSAAIPLSLSFLFLFLHLADSQPVSPVD QDPNSEIKCGSCPCSNPCVKQFPPPPPPP   NCKPALPPPPPPPRFIYTSLSPPPPPRFIYTTGVPGN
Subjt:  MAPSAAIPLSLSFLFLFLHLADSQPVSPVDLQDPNSEIKCGSCPCSNPCVKQFPPPPPPPPPPNCKPALPPPPPPPRFIYTSLSPPPPPRFIYTTGVPGN

Query:  LYQIDANNRWYYFSGTTRNQPATAALVVALGCGALNLMAFGKW
        LYQIDANNRWYYFSGTTRNQPATAALVVALGCGALNLMAFGKW
Subjt:  LYQIDANNRWYYFSGTTRNQPATAALVVALGCGALNLMAFGKW

XP_022984145.1 probable pathogenesis-related protein ARB_02861 [Cucurbita maxima]3.36e-9096.5Show/hide
Query:  MAPSAAIPLSLSFLFLFLHLADSQPVSPVDLQDPNSEIKCGSCPCSNPCVKQFPPPPPPPPPPNCKPALPPPPPPPRFIYTSLSPPPPPRFIYTTGVPGN
        MAPSAAIPLSLSFLFLFLHLA+SQPVSPVD QDPNSEIKCGSCPCSNPCVKQFPPPPPPPPP NCKPALPPPPPPPRFIYTSLSPPPPPRFIYTTGVPGN
Subjt:  MAPSAAIPLSLSFLFLFLHLADSQPVSPVDLQDPNSEIKCGSCPCSNPCVKQFPPPPPPPPPPNCKPALPPPPPPPRFIYTSLSPPPPPRFIYTTGVPGN

Query:  LYQIDANNRWYYFSGTTRNQPATAALVVALGCGALNLMAFGKW
        LYQIDANNRWYYFSGTTRN  ATAALVVALGCGALNLMAFGKW
Subjt:  LYQIDANNRWYYFSGTTRNQPATAALVVALGCGALNLMAFGKW

XP_023528316.1 leucine-rich repeat extensin-like protein 3 [Cucurbita pepo subsp. pepo]4.71e-9396.5Show/hide
Query:  MAPSAAIPLSLSFLFLFLHLADSQPVSPVDLQDPNSEIKCGSCPCSNPCVKQFPPPPPPPPPPNCKPALPPPPPPPRFIYTSLSPPPPPRFIYTTGVPGN
        MAPSAAIPLSLSFLFLFLHLADSQP SPVD QDPNSEIKCGSCPCSNPCVKQFPPPPPPPPPPNCKPALPPPPPPPRFIYT+LSPPPPPRFIYTTGVPGN
Subjt:  MAPSAAIPLSLSFLFLFLHLADSQPVSPVDLQDPNSEIKCGSCPCSNPCVKQFPPPPPPPPPPNCKPALPPPPPPPRFIYTSLSPPPPPRFIYTTGVPGN

Query:  LYQIDANNRWYYFSGTTRNQPATAALVVALGCGALNLMAFGKW
        LYQIDANNRWYYFSGTTRN+PATA LVVALGCGALNLMAFGKW
Subjt:  LYQIDANNRWYYFSGTTRNQPATAALVVALGCGALNLMAFGKW

TrEMBL top hitse value%identityAlignment
A0A0A0L7R0 Uncharacterized protein8.71e-5668.67Show/hide
Query:  MAPSAAIPLSLSFLFLFLHLADSQPVSP--VDLQDPNSEIKCGSCPCSNPCVKQF---PPPPPPPPPPN-CKPALPPPPPPPRFIYTSLSP-PPPPRFIY
        MAP AAI LS SFL   L LA+SQ  SP  VD Q+P++EIKCGSCPCSNPC++Q    PPPPPPPPPP+ C P +   PPPPRFIYT+ SP PPPPRF Y
Subjt:  MAPSAAIPLSLSFLFLFLHLADSQPVSP--VDLQDPNSEIKCGSCPCSNPCVKQF---PPPPPPPPPPN-CKPALPPPPPPPRFIYTSLSP-PPPPRFIY

Query:  TTGVPGNLYQIDANNRWYYFSGTTRNQPATAALVVALGCGALNLMAFGKW
        TTGVPGNLY+IDANN WYYFSGT R +P  AA+ VA+GCGAL+LM F KW
Subjt:  TTGVPGNLYQIDANNRWYYFSGTTRNQPATAALVVALGCGALNLMAFGKW

A0A2N9I535 Uncharacterized protein1.03e-2556.52Show/hide
Query:  DLQDPNSEIKCGSCPCSNPCVKQFPPPPPPPPPPNCKPALPPPPPP-----PRFIY-TSLSPPPPPRFIYTTGVPGNLYQIDANNRWYYFSGTTRNQPAT
        D ++ N+E+KCG+CPC NPC +Q PPPPPPPPPP     LPPPPPP     P   Y T  +PPPPPRFIY TGVPGNLY  D  N W Y+SG  RN    
Subjt:  DLQDPNSEIKCGSCPCSNPCVKQFPPPPPPPPPPNCKPALPPPPPP-----PRFIY-TSLSPPPPPRFIYTTGVPGNLYQIDANNRWYYFSGTTRNQPAT

Query:  AALVVALGCGALNLM
        + L+V  GCG L L+
Subjt:  AALVVALGCGALNLM

A0A5A7V4T2 Formin-like protein 39.07e-5770.07Show/hide
Query:  MAPSAAIPLSLSFLFLFLHLADSQPVSPV--DLQDPNSEIKCGSCPCSNPCVKQFPPPPPPPPPPN-CKPALPPPPPPPRFIYTSLSP-PPPPRFIYTTG
        M  SAAI LS SFL L L LA SQ  SP+  D Q+P++EIKCGSCPCSNPC++Q  PPPPPPPPP+ C P +   PPPPRFIYT  SP PPPPRF YTTG
Subjt:  MAPSAAIPLSLSFLFLFLHLADSQPVSPV--DLQDPNSEIKCGSCPCSNPCVKQFPPPPPPPPPPN-CKPALPPPPPPPRFIYTSLSP-PPPPRFIYTTG

Query:  VPGNLYQIDANNRWYYFSGTTRNQPATAALVVALGCGALNLMAFGKW
        VPGNLY+IDANN WYYFSGTT  +P  AA+VVALGCGAL+LM F KW
Subjt:  VPGNLYQIDANNRWYYFSGTTRNQPATAALVVALGCGALNLMAFGKW

A0A6J1GAW3 leucine-rich repeat extensin-like protein 23.54e-3457.82Show/hide
Query:  MAPSAAIPLSLSFLFLFLHLADSQPVSPVDLQDPNSEIKCGSCP-CSNPCVKQFPPPPPPPPPPNCKPALPPPP-PPPRFIYTSLSPPPPP-RFIYTTGV
        MAPSAAI LSL   F+      S P+S   L DP++EI C S   CSNP V+Q  P           P LPPPP PPPRF YT+LS PPPP RFIYTTGV
Subjt:  MAPSAAIPLSLSFLFLFLHLADSQPVSPVDLQDPNSEIKCGSCP-CSNPCVKQFPPPPPPPPPPNCKPALPPPP-PPPRFIYTSLSPPPPP-RFIYTTGV

Query:  PGNLYQIDANNRWYYFSGTTRNQPATAALVVA-LGCGALNLMAFGKW
        P +LYQ D  NRWYYFSG     PA AALVV  L CGAL+L+ FGKW
Subjt:  PGNLYQIDANNRWYYFSGTTRNQPATAALVVA-LGCGALNLMAFGKW

A0A6J1J7W0 probable pathogenesis-related protein ARB_028611.63e-9096.5Show/hide
Query:  MAPSAAIPLSLSFLFLFLHLADSQPVSPVDLQDPNSEIKCGSCPCSNPCVKQFPPPPPPPPPPNCKPALPPPPPPPRFIYTSLSPPPPPRFIYTTGVPGN
        MAPSAAIPLSLSFLFLFLHLA+SQPVSPVD QDPNSEIKCGSCPCSNPCVKQFPPPPPPPPP NCKPALPPPPPPPRFIYTSLSPPPPPRFIYTTGVPGN
Subjt:  MAPSAAIPLSLSFLFLFLHLADSQPVSPVDLQDPNSEIKCGSCPCSNPCVKQFPPPPPPPPPPNCKPALPPPPPPPRFIYTSLSPPPPPRFIYTTGVPGN

Query:  LYQIDANNRWYYFSGTTRNQPATAALVVALGCGALNLMAFGKW
        LYQIDANNRWYYFSGTTRN  ATAALVVALGCGALNLMAFGKW
Subjt:  LYQIDANNRWYYFSGTTRNQPATAALVVALGCGALNLMAFGKW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G02405.1 proline-rich family protein3.7e-0434.82Show/hide
Query:  MAPSAAIPLSLSFLFLFLHLADSQPVSPVDLQDPNSEIKCGSCPCSNPCVKQFPPPPPPPPPPNCKPALPPP-PPPPRFIYTSLS------PPPPPRFIY
        M+P       L+   L   +  + P+  ++ +D ++E+         PC++  PPPPP PPPP+C P+ PPP PPPP+      S      PPPPP +++
Subjt:  MAPSAAIPLSLSFLFLFLHLADSQPVSPVDLQDPNSEIKCGSCPCSNPCVKQFPPPPPPPPPPNCKPALPPP-PPPPRFIYTSLS------PPPPPRFIY

Query:  TTGVPGNLYQID
        T   PG+LY I+
Subjt:  TTGVPGNLYQID

AT1G23040.1 hydroxyproline-rich glycoprotein family protein4.6e-0751.56Show/hide
Query:  CSNPCVKQFP---PPPPPPPPPNCKPALPPPPPPPRFIYTSLSPPPPPRFIYTTGVPGNLYQID
        CS  C++  P   PPPP PPPP C P    PPPPP+ + +   PPPP  F+Y TG PGNLY +D
Subjt:  CSNPCVKQFP---PPPPPPPPPNCKPALPPPPPPPRFIYTSLSPPPPPRFIYTTGVPGNLYQID

AT1G70990.1 proline-rich family protein4.3e-0540.59Show/hide
Query:  AIPLSLSFLFLFLHLADSQPVSPVDLQDPNSEIKCGSCPCSNPCVKQFPPP-PPPPPPPNCKPALPPPPPPPRFIYTSLSPPPPPRFIYTTGVPGNLYQI
        A  L  + +FL   +  +   S  + +     IKC       PC++  PPP PPPP PP    A PPPP PP     S  PPPP  +IY TG PG LY I
Subjt:  AIPLSLSFLFLFLHLADSQPVSPVDLQDPNSEIKCGSCPCSNPCVKQFPPP-PPPPPPPNCKPALPPPPPPPRFIYTSLSPPPPPRFIYTTGVPGNLYQI

Query:  D
        D
Subjt:  D

AT3G03350.2 NAD(P)-binding Rossmann-fold superfamily protein1.2e-0741.18Show/hide
Query:  LPPPPPPPRFIYTSLSPPPPPRFIYTTGVPGNLYQIDANNRWYYFSGTTRNQPATAALVVALGCGALN
        L PPPP   +   S S PPPP+++Y TGVPG LY+ + +++W Y S   RN      ++V +G G +N
Subjt:  LPPPPPPPRFIYTSLSPPPPPRFIYTTGVPGNLYQIDANNRWYYFSGTTRNQPATAALVVALGCGALN

AT3G22800.1 Leucine-rich repeat (LRR) family protein2.2e-0450Show/hide
Query:  IKCGSCPCSNPC-VKQFPPPPPPPPPPNCKPALPPPPPPPRFIYTSLSPPP--PPRFIYTTGVPGNLY
        I C S  CS P      PPPPPPPPPP   P  PPPPPPP ++Y S  PPP  PP ++Y    P  +Y
Subjt:  IKCGSCPCSNPC-VKQFPPPPPPPPPPNCKPALPPPPPPPRFIYTSLSPPP--PPRFIYTTGVPGNLY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCCTTCCGCCGCCATTCCGCTGTCCCTTTCGTTTCTCTTCCTCTTCCTTCACCTCGCCGACTCCCAACCCGTCTCGCCGGTCGATCTGCAAGATCCCAATTCCGA
AATAAAATGTGGATCATGCCCTTGTTCCAACCCATGTGTTAAACAATTCCCTCCTCCGCCGCCACCGCCGCCGCCGCCGAATTGCAAACCAGCGCTGCCGCCTCCACCAC
CGCCTCCCAGGTTTATTTATACATCGCTATCTCCACCACCACCTCCAAGGTTTATTTACACAACAGGTGTACCCGGTAACCTGTATCAGATCGATGCCAATAACCGTTGG
TATTACTTCTCCGGCACAACCAGGAACCAGCCAGCCACGGCGGCGCTCGTGGTGGCGCTTGGCTGTGGAGCTTTGAATCTCATGGCGTTTGGTAAGTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGCCTTCCGCCGCCATTCCGCTGTCCCTTTCGTTTCTCTTCCTCTTCCTTCACCTCGCCGACTCCCAACCCGTCTCGCCGGTCGATCTGCAAGATCCCAATTCCGA
AATAAAATGTGGATCATGCCCTTGTTCCAACCCATGTGTTAAACAATTCCCTCCTCCGCCGCCACCGCCGCCGCCGCCGAATTGCAAACCAGCGCTGCCGCCTCCACCAC
CGCCTCCCAGGTTTATTTATACATCGCTATCTCCACCACCACCTCCAAGGTTTATTTACACAACAGGTGTACCCGGTAACCTGTATCAGATCGATGCCAATAACCGTTGG
TATTACTTCTCCGGCACAACCAGGAACCAGCCAGCCACGGCGGCGCTCGTGGTGGCGCTTGGCTGTGGAGCTTTGAATCTCATGGCGTTTGGTAAGTGGTAA
Protein sequenceShow/hide protein sequence
MAPSAAIPLSLSFLFLFLHLADSQPVSPVDLQDPNSEIKCGSCPCSNPCVKQFPPPPPPPPPPNCKPALPPPPPPPRFIYTSLSPPPPPRFIYTTGVPGNLYQIDANNRW
YYFSGTTRNQPATAALVVALGCGALNLMAFGKW