; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Csor.00g152000 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g152000
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionYrdC-like domain-containing protein
Genome locationCsor_Chr14:3735065..3738274
RNA-Seq ExpressionCsor.00g152000
SyntenyCsor.00g152000
Gene Ontology termsGO:0003725 - double-stranded RNA binding (molecular function)
InterPro domainsIPR006070 - YrdC-like domain
IPR017945 - DHBP synthase RibB-like alpha/beta domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581099.1 putative protein YciO, partial [Cucurbita argyrosperma subsp. sororia]6.22e-218100Show/hide
Query:  MIANVKSSGYPSAASSLSSVRSLAPIRFPSLPRTVRFDGSGTSRRLQVLAMAVKRSPKRLKYSAPRFTKEGSLLYVKAESEEDAWKLEPIVDLLKEGAVG
        MIANVKSSGYPSAASSLSSVRSLAPIRFPSLPRTVRFDGSGTSRRLQVLAMAVKRSPKRLKYSAPRFTKEGSLLYVKAESEEDAWKLEPIVDLLKEGAVG
Subjt:  MIANVKSSGYPSAASSLSSVRSLAPIRFPSLPRTVRFDGSGTSRRLQVLAMAVKRSPKRLKYSAPRFTKEGSLLYVKAESEEDAWKLEPIVDLLKEGAVG

Query:  VIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPCGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKQYIGYGTTTAKHA
        VIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPCGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKQYIGYGTTTAKHA
Subjt:  VIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPCGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKQYIGYGTTTAKHA

Query:  SRKNVGVRIPDDAICQAVLEKMDAPLISTSVKCLKENEWLLDPVVIADIYGKEGLDFVVDGGVRVADPSTVVDMTITPPKLLRQGKGAKLPWMVAEGDDE
        SRKNVGVRIPDDAICQAVLEKMDAPLISTSVKCLKENEWLLDPVVIADIYGKEGLDFVVDGGVRVADPSTVVDMTITPPKLLRQGKGAKLPWMVAEGDDE
Subjt:  SRKNVGVRIPDDAICQAVLEKMDAPLISTSVKCLKENEWLLDPVVIADIYGKEGLDFVVDGGVRVADPSTVVDMTITPPKLLRQGKGAKLPWMVAEGDDE

Query:  PPSE
        PPSE
Subjt:  PPSE

XP_022935670.1 uncharacterized protein LOC111442458 [Cucurbita moschata]1.20e-21398.69Show/hide
Query:  MIANVKSSGYPSAASSLSSVRSLAPIRFPSLPRTVRFDGSGTSRRLQVLAMAVKRSPKRLKYSAPRFTKEGSLLYVKAESEEDAWKLEPIVDLLKEGAVG
        MIANVKSSGYPSAASSLSSVRSLAPIRFPSLPRTVRFDGSGTSRRLQVLAMAVKRSPKRLKYSAPRFTKEGSLLYVKAESEEDAWKLEPIVDLLKEGAVG
Subjt:  MIANVKSSGYPSAASSLSSVRSLAPIRFPSLPRTVRFDGSGTSRRLQVLAMAVKRSPKRLKYSAPRFTKEGSLLYVKAESEEDAWKLEPIVDLLKEGAVG

Query:  VIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPCGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKQYIGYGTTTAKHA
        VIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPCGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKQYIGYGTTTAKHA
Subjt:  VIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPCGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKQYIGYGTTTAKHA

Query:  -SRKNVGVRIPDDAICQAVLEKMDAPLISTSVKCLKENEWLLDPVVIADIYGKEGLDFVVDGGVRVADPSTVVDMTITPPKLLRQGKGAKLPWMVAEGDD
         SRKNVGVRIPDDAICQAVLEK DAPLISTSVKCLKENEWLLDPVVIADIYGKEGLDFVVDGGVRVADPSTVVDMTITPPKLLRQGKGAKLPWMVAEGDD
Subjt:  -SRKNVGVRIPDDAICQAVLEKMDAPLISTSVKCLKENEWLLDPVVIADIYGKEGLDFVVDGGVRVADPSTVVDMTITPPKLLRQGKGAKLPWMVAEGDD

Query:  EPPSE
         PP+E
Subjt:  EPPSE

XP_022984138.1 uncharacterized protein LOC111482522 [Cucurbita maxima]2.22e-20996.72Show/hide
Query:  MIANVKSSGYPSAASS-LSSVRSLAPIRFPSLPRTVRFDGSGTSRRLQVLAMAVKRSPKRLKYSAPRFTKEGSLLYVKAESEEDAWKLEPIVDLLKEGAV
        MI NVKSSGYPSAASS LSSVRS APIRFPS PR VRFDGS TSRRLQVLAMAVKRSPKRLKYSAPRFTK+GSLLYVKAES EDAWKLEPIVDLLKEGAV
Subjt:  MIANVKSSGYPSAASS-LSSVRSLAPIRFPSLPRTVRFDGSGTSRRLQVLAMAVKRSPKRLKYSAPRFTKEGSLLYVKAESEEDAWKLEPIVDLLKEGAV

Query:  GVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPCGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKQYIGYGTTTAKH
        GVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPCGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKQYIGYGTTTAKH
Subjt:  GVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPCGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKQYIGYGTTTAKH

Query:  ASRKNVGVRIPDDAICQAVLEKMDAPLISTSVKCLKENEWLLDPVVIADIYGKEGLDFVVDGGVRVADPSTVVDMTITPPKLLRQGKGAKLPWMVAEGDD
        ASRKNVGVRIPDDAICQAVLEKMDAPLISTSVKCLKENEWLLDPVVIADIYGKEGLDFVVDGGVRVADPSTVVDMTITPPKLLRQGKGA+LPWMVAEGDD
Subjt:  ASRKNVGVRIPDDAICQAVLEKMDAPLISTSVKCLKENEWLLDPVVIADIYGKEGLDFVVDGGVRVADPSTVVDMTITPPKLLRQGKGAKLPWMVAEGDD

Query:  EPPSE
        EPP+E
Subjt:  EPPSE

XP_023527501.1 uncharacterized protein LOC111790710 [Cucurbita pepo subsp. pepo]1.64e-21398.36Show/hide
Query:  MIANVKSSGYPSAASSLSSVRSLAPIRFPSLPRTVRFDGSGTSRRLQVLAMAVKRSPKRLKYSAPRFTKEGSLLYVKAESEEDAWKLEPIVDLLKEGAVG
        MIANVKSS YPSAASSLSSVRS APIRFPS PRTVRFDGSGTSRRLQVLAMAVKRSPKRLKYSAPRFTKEGSLLYVKAES EDAWKLEPIVDLLKEGAVG
Subjt:  MIANVKSSGYPSAASSLSSVRSLAPIRFPSLPRTVRFDGSGTSRRLQVLAMAVKRSPKRLKYSAPRFTKEGSLLYVKAESEEDAWKLEPIVDLLKEGAVG

Query:  VIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPCGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKQYIGYGTTTAKHA
        VIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPCGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKQYIGYGTTTAKHA
Subjt:  VIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPCGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKQYIGYGTTTAKHA

Query:  SRKNVGVRIPDDAICQAVLEKMDAPLISTSVKCLKENEWLLDPVVIADIYGKEGLDFVVDGGVRVADPSTVVDMTITPPKLLRQGKGAKLPWMVAEGDDE
        SRKNVGVRIPDDAICQAVLEKMDAPLISTSVKCLKENEWLLDPVVIADIYGKEGLDFVVDGGVRVADPSTVVDMTITPPKLLRQGKGAKLPWMVAEGDDE
Subjt:  SRKNVGVRIPDDAICQAVLEKMDAPLISTSVKCLKENEWLLDPVVIADIYGKEGLDFVVDGGVRVADPSTVVDMTITPPKLLRQGKGAKLPWMVAEGDDE

Query:  PPSE
        PP+E
Subjt:  PPSE

XP_038877956.1 uncharacterized protein YciO [Benincasa hispida]1.21e-19090.03Show/hide
Query:  MIANVKSSGYPSAASSLSSVRSLAPIRFPSLPRTVRFDGSGTSRRLQVLAMAVKRSPKRLKYSAPRFTKEGSLLYVKAESEEDAWKLEPIVDLLKEGAVG
        MI NVKS  YPS ASS SSVRS APIRFP  P  +RF GS TSRRLQVLA  VKRSPKRLKYSAPRFTKEGSLLYVKAES ED WKLEPIV+LLKEGAVG
Subjt:  MIANVKSSGYPSAASSLSSVRSLAPIRFPSLPRTVRFDGSGTSRRLQVLAMAVKRSPKRLKYSAPRFTKEGSLLYVKAESEEDAWKLEPIVDLLKEGAVG

Query:  VIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPCGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKQYIGYGTTTAKHA
        VIPTDTVY IVCDLKNPSAIER+RRIKNIEPSKPLSILCHSFRDIDKYTTGFP GDGQGHSNIFRMVKHCLPGPYTFILTASKELPK  I YGTTTAK+A
Subjt:  VIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPCGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKQYIGYGTTTAKHA

Query:  SRKNVGVRIPDDAICQAVLEKMDAPLISTSVKCLKENEWLLDPVVIADIYGKEGLDFVVDGGVRVADPSTVVDMTITPPKLLRQGKGAKLPWMVAEGDDE
        SRKNVGVRIPDDAICQA+LEKMDAPLISTSVK LKENEWLLDPVVIADIYG+EGLDFVVDGGVRVADPSTVVDMTITPPK+LRQGKGA+LPWMVAEGDDE
Subjt:  SRKNVGVRIPDDAICQAVLEKMDAPLISTSVKCLKENEWLLDPVVIADIYGKEGLDFVVDGGVRVADPSTVVDMTITPPKLLRQGKGAKLPWMVAEGDDE

Query:  P
        P
Subjt:  P

TrEMBL top hitse value%identityAlignment
A0A0A0LBV9 YrdC-like domain-containing protein2.02e-18386.71Show/hide
Query:  MIANVKSSGYPSAASSLSSVRSLAPIRFPSLPRTVRFDGSGTSRRLQVLAMAVKRSPKRLKYSAPRFTKEGSLLYVKAESEEDAWKLEPIVDLLKEGAVG
        MI NVK   +PS ASSLSS R+ APIRFPS P    FDG  TSRRLQVLAM VKRSPKRLKYSAPRFTKEGSL+YVKAES ED WKL+PIV+LLKEGAVG
Subjt:  MIANVKSSGYPSAASSLSSVRSLAPIRFPSLPRTVRFDGSGTSRRLQVLAMAVKRSPKRLKYSAPRFTKEGSLLYVKAESEEDAWKLEPIVDLLKEGAVG

Query:  VIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPCGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKQYIGYGTTTAKHA
        VIPTDTVY IVCDLKNPSAIERM+RIKNIEP+KPLSILC SFRDIDKYTTGFP GDGQGHS+IFRMVKHCLPGPYTFILTASKELPK  I YGTTTAK+A
Subjt:  VIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPCGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKQYIGYGTTTAKHA

Query:  SRKNVGVRIPDDAICQAVLEKMDAPLISTSVKCLKENEWLLDPVVIADIYGKEGLDFVVDGGVRVADPSTVVDMTITPPKLLRQGKGAKLPWMVAEGDDE
        SRKNVGVRIPDD+ICQA+LEKMD PLISTSVK  KENEWLLDPVVIADIYG+EGLDFVVDGGVRVADPSTVVDMTITPPK+LRQGKGA+LPWMVAEGDDE
Subjt:  SRKNVGVRIPDDAICQAVLEKMDAPLISTSVKCLKENEWLLDPVVIADIYGKEGLDFVVDGGVRVADPSTVVDMTITPPKLLRQGKGAKLPWMVAEGDDE

Query:  P
        P
Subjt:  P

A0A1S3BMX4 uncharacterized protein YciO isoform X14.66e-18989.04Show/hide
Query:  MIANVKSSGYPSAASSLSSVRSLAPIRFPSLPRTVRFDGSGTSRRLQVLAMAVKRSPKRLKYSAPRFTKEGSLLYVKAESEEDAWKLEPIVDLLKEGAVG
        MI NV+S+ +PS ASSLSS+RS APIRFPS P   RFDG  TSRRLQVLAM VKRSPKRLKYSAPRFTKEGSL+YVKAES ED WKL+PIV+LLKEGAVG
Subjt:  MIANVKSSGYPSAASSLSSVRSLAPIRFPSLPRTVRFDGSGTSRRLQVLAMAVKRSPKRLKYSAPRFTKEGSLLYVKAESEEDAWKLEPIVDLLKEGAVG

Query:  VIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPCGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKQYIGYGTTTAKHA
        VIPTDTVY IVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFP GDGQGHSNIFRMVKHCLPGPYTFILTASKELPK  I YGTTTAK+A
Subjt:  VIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPCGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKQYIGYGTTTAKHA

Query:  SRKNVGVRIPDDAICQAVLEKMDAPLISTSVKCLKENEWLLDPVVIADIYGKEGLDFVVDGGVRVADPSTVVDMTITPPKLLRQGKGAKLPWMVAEGDDE
        SRKNVGVRIPDDAICQA+LEKMD PLISTSVK  KENEWLLDPVVIADIYG+EGLDFVVDGGVRVADPSTVVDMTITPPK+LRQGKGA+LPWMVAEGDDE
Subjt:  SRKNVGVRIPDDAICQAVLEKMDAPLISTSVKCLKENEWLLDPVVIADIYGKEGLDFVVDGGVRVADPSTVVDMTITPPKLLRQGKGAKLPWMVAEGDDE

Query:  P
        P
Subjt:  P

A0A5D3C4N1 YrdC domain-containing protein5.49e-18077.68Show/hide
Query:  MIANVKSSGYPSAASSLSSVRSLAPIRFPSLPRTVRFDGSGTSRRLQVLAMAVKRSPKRLKYSAPRFTK-------------------------------
        MI NV+S+ +PS ASSLSS+RS APIRFPS P   RFDG  TSRRLQVLAM VKRSPKRLKYSAPRFTK                               
Subjt:  MIANVKSSGYPSAASSLSSVRSLAPIRFPSLPRTVRFDGSGTSRRLQVLAMAVKRSPKRLKYSAPRFTK-------------------------------

Query:  -------------EGSLLYVKAESEEDAWKLEPIVDLLKEGAVGVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPCGD
                     EGSL+YVKAES ED WKL+PIV+LLKEGAVGVIPTDTVY IVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFP GD
Subjt:  -------------EGSLLYVKAESEEDAWKLEPIVDLLKEGAVGVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPCGD

Query:  GQGHSNIFRMVKHCLPGPYTFILTASKELPKQYIGYGTTTAKHASRKNVGVRIPDDAICQAVLEKMDAPLISTSVKCLKENEWLLDPVVIADIYGKEGLD
        GQGHSNIFRMVKHCLPGPYTFILTASKELPK  I YGTTTAK+ASRKNVGVRIPDDAICQA+LEKMD PLISTSVK  KENEWLLDPVVIADIYG+EGLD
Subjt:  GQGHSNIFRMVKHCLPGPYTFILTASKELPKQYIGYGTTTAKHASRKNVGVRIPDDAICQAVLEKMDAPLISTSVKCLKENEWLLDPVVIADIYGKEGLD

Query:  FVVDGGVRVADPSTVVDMTITPPKLLRQGKGAKLPWMVAEGDDEP
        FVVDGGVRVADPSTVVDMTITPPK+LRQGKGA+LPWMVAEGDDEP
Subjt:  FVVDGGVRVADPSTVVDMTITPPKLLRQGKGAKLPWMVAEGDDEP

A0A6J1FBB1 uncharacterized protein LOC1114424585.80e-21498.69Show/hide
Query:  MIANVKSSGYPSAASSLSSVRSLAPIRFPSLPRTVRFDGSGTSRRLQVLAMAVKRSPKRLKYSAPRFTKEGSLLYVKAESEEDAWKLEPIVDLLKEGAVG
        MIANVKSSGYPSAASSLSSVRSLAPIRFPSLPRTVRFDGSGTSRRLQVLAMAVKRSPKRLKYSAPRFTKEGSLLYVKAESEEDAWKLEPIVDLLKEGAVG
Subjt:  MIANVKSSGYPSAASSLSSVRSLAPIRFPSLPRTVRFDGSGTSRRLQVLAMAVKRSPKRLKYSAPRFTKEGSLLYVKAESEEDAWKLEPIVDLLKEGAVG

Query:  VIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPCGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKQYIGYGTTTAKHA
        VIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPCGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKQYIGYGTTTAKHA
Subjt:  VIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPCGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKQYIGYGTTTAKHA

Query:  -SRKNVGVRIPDDAICQAVLEKMDAPLISTSVKCLKENEWLLDPVVIADIYGKEGLDFVVDGGVRVADPSTVVDMTITPPKLLRQGKGAKLPWMVAEGDD
         SRKNVGVRIPDDAICQAVLEK DAPLISTSVKCLKENEWLLDPVVIADIYGKEGLDFVVDGGVRVADPSTVVDMTITPPKLLRQGKGAKLPWMVAEGDD
Subjt:  -SRKNVGVRIPDDAICQAVLEKMDAPLISTSVKCLKENEWLLDPVVIADIYGKEGLDFVVDGGVRVADPSTVVDMTITPPKLLRQGKGAKLPWMVAEGDD

Query:  EPPSE
         PP+E
Subjt:  EPPSE

A0A6J1J9P6 uncharacterized protein LOC1114825221.07e-20996.72Show/hide
Query:  MIANVKSSGYPSAASS-LSSVRSLAPIRFPSLPRTVRFDGSGTSRRLQVLAMAVKRSPKRLKYSAPRFTKEGSLLYVKAESEEDAWKLEPIVDLLKEGAV
        MI NVKSSGYPSAASS LSSVRS APIRFPS PR VRFDGS TSRRLQVLAMAVKRSPKRLKYSAPRFTK+GSLLYVKAES EDAWKLEPIVDLLKEGAV
Subjt:  MIANVKSSGYPSAASS-LSSVRSLAPIRFPSLPRTVRFDGSGTSRRLQVLAMAVKRSPKRLKYSAPRFTKEGSLLYVKAESEEDAWKLEPIVDLLKEGAV

Query:  GVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPCGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKQYIGYGTTTAKH
        GVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPCGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKQYIGYGTTTAKH
Subjt:  GVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPCGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKQYIGYGTTTAKH

Query:  ASRKNVGVRIPDDAICQAVLEKMDAPLISTSVKCLKENEWLLDPVVIADIYGKEGLDFVVDGGVRVADPSTVVDMTITPPKLLRQGKGAKLPWMVAEGDD
        ASRKNVGVRIPDDAICQAVLEKMDAPLISTSVKCLKENEWLLDPVVIADIYGKEGLDFVVDGGVRVADPSTVVDMTITPPKLLRQGKGA+LPWMVAEGDD
Subjt:  ASRKNVGVRIPDDAICQAVLEKMDAPLISTSVKCLKENEWLLDPVVIADIYGKEGLDFVVDGGVRVADPSTVVDMTITPPKLLRQGKGAKLPWMVAEGDD

Query:  EPPSE
        EPP+E
Subjt:  EPPSE

SwissProt top hitse value%identityAlignment
P0AFR4 Uncharacterized protein YciO3.0e-2430.54Show/hide
Query:  VDLLKEGAVGVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPCGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKQYI
        V+++++G V V PTD+ YA+ C +++ +A+ER+ RI+ +      +++C    ++  Y+           +  FR++K+  PG YTFIL  +KE+P++ +
Subjt:  VDLLKEGAVGVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPCGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKQYI

Query:  GYGTTTAKHASRKNVGVRIPDDAICQAVLEKMDAPLISTSVKCLKENEWLLDPVVIADIYGKEGLDFVVDGGVRVADPSTVVDMTITPPKLLRQGKGAKL
                   RK +G+R+P + I QA+LE +  P++STS+          DP  I D   K+ +D ++ GG     P+TV+D+T   P ++R+G G   
Subjt:  GYGTTTAKHASRKNVGVRIPDDAICQAVLEKMDAPLISTSVKCLKENEWLLDPVVIADIYGKEGLDFVVDGGVRVADPSTVVDMTITPPKLLRQGKGAKL

Query:  PWM
        P++
Subjt:  PWM

P0AFR5 Uncharacterized protein YciO3.0e-2430.54Show/hide
Query:  VDLLKEGAVGVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPCGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKQYI
        V+++++G V V PTD+ YA+ C +++ +A+ER+ RI+ +      +++C    ++  Y+           +  FR++K+  PG YTFIL  +KE+P++ +
Subjt:  VDLLKEGAVGVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPCGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKQYI

Query:  GYGTTTAKHASRKNVGVRIPDDAICQAVLEKMDAPLISTSVKCLKENEWLLDPVVIADIYGKEGLDFVVDGGVRVADPSTVVDMTITPPKLLRQGKGAKL
                   RK +G+R+P + I QA+LE +  P++STS+          DP  I D   K+ +D ++ GG     P+TV+D+T   P ++R+G G   
Subjt:  GYGTTTAKHASRKNVGVRIPDDAICQAVLEKMDAPLISTSVKCLKENEWLLDPVVIADIYGKEGLDFVVDGGVRVADPSTVVDMTITPPKLLRQGKGAKL

Query:  PWM
        P++
Subjt:  PWM

P0AFR6 Uncharacterized protein YciO3.0e-2430.54Show/hide
Query:  VDLLKEGAVGVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPCGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKQYI
        V+++++G V V PTD+ YA+ C +++ +A+ER+ RI+ +      +++C    ++  Y+           +  FR++K+  PG YTFIL  +KE+P++ +
Subjt:  VDLLKEGAVGVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPCGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKQYI

Query:  GYGTTTAKHASRKNVGVRIPDDAICQAVLEKMDAPLISTSVKCLKENEWLLDPVVIADIYGKEGLDFVVDGGVRVADPSTVVDMTITPPKLLRQGKGAKL
                   RK +G+R+P + I QA+LE +  P++STS+          DP  I D   K+ +D ++ GG     P+TV+D+T   P ++R+G G   
Subjt:  GYGTTTAKHASRKNVGVRIPDDAICQAVLEKMDAPLISTSVKCLKENEWLLDPVVIADIYGKEGLDFVVDGGVRVADPSTVVDMTITPPKLLRQGKGAKL

Query:  PWM
        P++
Subjt:  PWM

P45103 Uncharacterized protein HI_11981.9e-2330.45Show/hide
Query:  YVKAESEEDAWKLEPIVDLLKEGAVGVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPCGDGQGHSNIFRMVKHCLPGP
        Y+  E+ + A  +   V++L++G V V PTD+ YA+ C + +  A++R+  I+ +      +++C    ++  Y         + ++  +R++K+  PG 
Subjt:  YVKAESEEDAWKLEPIVDLLKEGAVGVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPCGDGQGHSNIFRMVKHCLPGP

Query:  YTFILTASKELPKQYIGYGTTTAKHASRKNVGVRIPDDAICQAVLEKMDAPLISTSVKC-LKENEWLLDPVVIADIYGKEGLDFVVDGGVRVADPSTVVD
        YTFILTA+KELP++ +     T+K   RK +G+R+PD+ I   +L  +  P++S S+    +E+    DP  I D   +  +D ++ GG    +P+TVVD
Subjt:  YTFILTASKELPKQYIGYGTTTAKHASRKNVGVRIPDDAICQAVLEKMDAPLISTSVKC-LKENEWLLDPVVIADIYGKEGLDFVVDGGVRVADPSTVVD

Query:  MTITPPKLLRQGKGAKLPWM
        +T   P +LR+G G+  P++
Subjt:  MTITPPKLLRQGKGAKLPWM

Q86U90 YrdC domain-containing protein, mitochondrial2.0e-1229.03Show/hide
Query:  GSLLYVKAESEEDAW--KLEPIVDLLKEGAVGVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKY-TTGFPCGDGQGHSNIFRMV
        GS     A  E   W   L   V  L+ GAV  +PTDT+Y + C     +A+  + R+K    +KPL++      D+ +Y     P G          ++
Subjt:  GSLLYVKAESEEDAW--KLEPIVDLLKEGAVGVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKY-TTGFPCGDGQGHSNIFRMV

Query:  KHCLPGPYTFILTASKELPKQYIGYGTTTAKHASRKNVGVRIPDDAICQAVLEKMDAPLISTSVKCLKENEWLLDPVVIADIYGKEGLDFVVDGGVRVAD
        K  LPGP T ++  S+EL K    +            VG+RIPD A  Q + +  + PL  TS   L      L+     D++ +  L  V+DGG ++ D
Subjt:  KHCLPGPYTFILTASKELPKQYIGYGTTTAKHASRKNVGVRIPDDAICQAVLEKMDAPLISTSVKCLKENEWLLDPVVIADIYGKEGLDFVVDGGVRVAD

Query:  --------PSTVVDMTI
                 STVVD+++
Subjt:  --------PSTVVDMTI

Arabidopsis top hitse value%identityAlignment
AT3G01920.1 DHBP synthase RibB-like alpha/beta domain2.6e-10865.67Show/hide
Query:  IANVKSSGYPSAASSLSSVRSLAPIRFPS-LPRTVRFDGSGTSRRLQVLAMAVKRSPKRLKYSAPRFTKEGSLLYVKAE-SEEDAWKLEPIVDLLKEGAV
        +A  K  G   AA  L  + S    R PS LP T     +  S R  ++A+A KRSPKRLKYS PRFTKEG L+Y++ +    D+WKL+P++DLLK+GAV
Subjt:  IANVKSSGYPSAASSLSSVRSLAPIRFPS-LPRTVRFDGSGTSRRLQVLAMAVKRSPKRLKYSAPRFTKEGSLLYVKAE-SEEDAWKLEPIVDLLKEGAV

Query:  GVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPCGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKQYIGYGTTTAKH
        GVIPTDTVYAI CD KN SA+ER+RRIK IE SKPLSILC S RDID +T GFP GDG GH+N+FR VK CLPGPYTFILTASKELPKQ +GYGTT+ K+
Subjt:  GVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPCGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKQYIGYGTTTAKH

Query:  ASRKNVGVRIPDDAICQAVLEKMDAPLISTSVKCLKENEWLLDPVVIADIYGKEGLDFVVDGGVRVADPSTVVDMTITPPKLLRQGKGAKLPWMVAEGDD
        ASRKNVGVRI DDA+CQA+L++MDAPLI TSVK  KENEW++DP  I DIYG EGLDFVVDGG+RVA+PST+VDMT   PK++R+GKG  LPWMV E D+
Subjt:  ASRKNVGVRIPDDAICQAVLEKMDAPLISTSVKCLKENEWLLDPVVIADIYGKEGLDFVVDGGVRVADPSTVVDMTITPPKLLRQGKGAKLPWMVAEGDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGCCAATGTCAAATCCAGCGGATATCCGTCTGCTGCTTCTTCTCTCTCTTCCGTTCGATCCTTAGCGCCAATACGGTTCCCTTCGCTACCACGTACCGTTCGTTT
CGACGGTTCTGGAACTTCACGGCGGCTCCAGGTCCTCGCCATGGCTGTGAAGCGGAGTCCTAAGCGCCTCAAGTACTCTGCTCCACGCTTCACCAAGGAAGGGAGCTTGC
TATATGTCAAAGCTGAATCGGAAGAGGATGCTTGGAAATTAGAACCCATAGTAGATCTTCTAAAAGAAGGCGCAGTTGGGGTTATTCCTACGGATACAGTGTATGCAATA
GTTTGTGATTTGAAGAACCCCTCAGCCATTGAACGAATGCGAAGGATCAAGAATATAGAACCTTCCAAGCCTCTAAGTATTTTGTGCCACTCTTTCCGGGACATCGATAA
ATATACTACAGGGTTTCCCTGTGGTGACGGCCAAGGCCATTCAAATATATTTCGCATGGTTAAGCATTGCCTACCTGGACCATATACCTTCATCTTAACTGCAAGCAAAG
AACTGCCTAAACAGTACATAGGGTACGGCACAACCACTGCAAAACATGCATCAAGGAAGAATGTCGGTGTGCGCATTCCCGATGATGCAATATGTCAAGCAGTACTGGAA
AAGATGGATGCTCCATTGATATCCACTAGTGTCAAATGCTTGAAGGAAAATGAGTGGTTGCTCGATCCAGTTGTCATAGCGGATATCTACGGGAAAGAGGGTCTGGATTT
TGTGGTGGATGGTGGAGTGAGAGTGGCAGATCCATCCACCGTAGTAGATATGACTATCACTCCACCAAAGCTTTTGCGGCAAGGGAAGGGAGCTAAACTGCCATGGATGG
TAGCTGAAGGTGACGACGAACCACCCTCCGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTGCCAATGTCAAATCCAGCGGATATCCGTCTGCTGCTTCTTCTCTCTCTTCCGTTCGATCCTTAGCGCCAATACGGTTCCCTTCGCTACCACGTACCGTTCGTTT
CGACGGTTCTGGAACTTCACGGCGGCTCCAGGTCCTCGCCATGGCTGTGAAGCGGAGTCCTAAGCGCCTCAAGTACTCTGCTCCACGCTTCACCAAGGAAGGGAGCTTGC
TATATGTCAAAGCTGAATCGGAAGAGGATGCTTGGAAATTAGAACCCATAGTAGATCTTCTAAAAGAAGGCGCAGTTGGGGTTATTCCTACGGATACAGTGTATGCAATA
GTTTGTGATTTGAAGAACCCCTCAGCCATTGAACGAATGCGAAGGATCAAGAATATAGAACCTTCCAAGCCTCTAAGTATTTTGTGCCACTCTTTCCGGGACATCGATAA
ATATACTACAGGGTTTCCCTGTGGTGACGGCCAAGGCCATTCAAATATATTTCGCATGGTTAAGCATTGCCTACCTGGACCATATACCTTCATCTTAACTGCAAGCAAAG
AACTGCCTAAACAGTACATAGGGTACGGCACAACCACTGCAAAACATGCATCAAGGAAGAATGTCGGTGTGCGCATTCCCGATGATGCAATATGTCAAGCAGTACTGGAA
AAGATGGATGCTCCATTGATATCCACTAGTGTCAAATGCTTGAAGGAAAATGAGTGGTTGCTCGATCCAGTTGTCATAGCGGATATCTACGGGAAAGAGGGTCTGGATTT
TGTGGTGGATGGTGGAGTGAGAGTGGCAGATCCATCCACCGTAGTAGATATGACTATCACTCCACCAAAGCTTTTGCGGCAAGGGAAGGGAGCTAAACTGCCATGGATGG
TAGCTGAAGGTGACGACGAACCACCCTCCGAGTGA
Protein sequenceShow/hide protein sequence
MIANVKSSGYPSAASSLSSVRSLAPIRFPSLPRTVRFDGSGTSRRLQVLAMAVKRSPKRLKYSAPRFTKEGSLLYVKAESEEDAWKLEPIVDLLKEGAVGVIPTDTVYAI
VCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPCGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKQYIGYGTTTAKHASRKNVGVRIPDDAICQAVLE
KMDAPLISTSVKCLKENEWLLDPVVIADIYGKEGLDFVVDGGVRVADPSTVVDMTITPPKLLRQGKGAKLPWMVAEGDDEPPSE