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Csor.00g170100 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g170100
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionBeta_elim_lyase domain-containing protein
Genome locationCsor_Chr11:5279802..5283561
RNA-Seq ExpressionCsor.00g170100
SyntenyCsor.00g170100
Gene Ontology termsGO:0006520 - cellular amino acid metabolic process (biological process)
GO:0016829 - lyase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588306.1 putative low-specificity L-threonine aldolase 1, partial [Cucurbita argyrosperma subsp. sororia]2.41e-57100Show/hide
Query:  MALNFTLTELVFSMLRLHLVFLLIDWYKRLTQYQFAYQKVWVHPLGQLSLAPKASLPRARMVLHHQISTSDVEYTLSCFQQTLNGIAAADGN
        MALNFTLTELVFSMLRLHLVFLLIDWYKRLTQYQFAYQKVWVHPLGQLSLAPKASLPRARMVLHHQISTSDVEYTLSCFQQTLNGIAAADGN
Subjt:  MALNFTLTELVFSMLRLHLVFLLIDWYKRLTQYQFAYQKVWVHPLGQLSLAPKASLPRARMVLHHQISTSDVEYTLSCFQQTLNGIAAADGN

XP_022933425.1 probable low-specificity L-threonine aldolase 1 [Cucurbita moschata]2.46e-1297.14Show/hide
Query:  RARMVLHHQISTSDVEYTLSCFQQTLNGIAAADGN
        RARMVLHHQISTSDVEYTLSCFQQTL+GIAAADGN
Subjt:  RARMVLHHQISTSDVEYTLSCFQQTLNGIAAADGN

XP_022966477.1 probable low-specificity L-threonine aldolase 1 isoform X1 [Cucurbita maxima]2.31e-1194.29Show/hide
Query:  RARMVLHHQISTSDVEYTLSCFQQTLNGIAAADGN
        RARMVLHHQISTSDVEYTLSCFQQTL+GIAAA GN
Subjt:  RARMVLHHQISTSDVEYTLSCFQQTLNGIAAADGN

XP_022966485.1 probable low-specificity L-threonine aldolase 1 isoform X2 [Cucurbita maxima]2.30e-1194.29Show/hide
Query:  RARMVLHHQISTSDVEYTLSCFQQTLNGIAAADGN
        RARMVLHHQISTSDVEYTLSCFQQTL+GIAAA GN
Subjt:  RARMVLHHQISTSDVEYTLSCFQQTLNGIAAADGN

XP_023531905.1 probable low-specificity L-threonine aldolase 1 [Cucurbita pepo subsp. pepo]8.84e-1294.29Show/hide
Query:  RARMVLHHQISTSDVEYTLSCFQQTLNGIAAADGN
        RARMVLHHQISTSDVEYTLSCFQQTL+GIAA DGN
Subjt:  RARMVLHHQISTSDVEYTLSCFQQTLNGIAAADGN

TrEMBL top hitse value%identityAlignment
A0A0A0M3F6 Beta_elim_lyase domain-containing protein1.45e-0977.14Show/hide
Query:  RARMVLHHQISTSDVEYTLSCFQQTLNGIAAADGN
        RAR+V HHQISTSDV+Y LSCFQQTLNGI   +GN
Subjt:  RARMVLHHQISTSDVEYTLSCFQQTLNGIAAADGN

A0A1S3BWA2 probable low-specificity L-threonine aldolase 1 isoform X21.86e-0976.32Show/hide
Query:  SLPRARMVLHHQISTSDVEYTLSCFQQTLNGIAAADGN
        S  RAR+VLHHQISTSDV+YTLSCF+QTLNGI   +GN
Subjt:  SLPRARMVLHHQISTSDVEYTLSCFQQTLNGIAAADGN

A0A6J1EZ04 probable low-specificity L-threonine aldolase 11.19e-1297.14Show/hide
Query:  RARMVLHHQISTSDVEYTLSCFQQTLNGIAAADGN
        RARMVLHHQISTSDVEYTLSCFQQTL+GIAAADGN
Subjt:  RARMVLHHQISTSDVEYTLSCFQQTLNGIAAADGN

A0A6J1HN30 probable low-specificity L-threonine aldolase 1 isoform X11.12e-1194.29Show/hide
Query:  RARMVLHHQISTSDVEYTLSCFQQTLNGIAAADGN
        RARMVLHHQISTSDVEYTLSCFQQTL+GIAAA GN
Subjt:  RARMVLHHQISTSDVEYTLSCFQQTLNGIAAADGN

A0A6J1HRS8 probable low-specificity L-threonine aldolase 1 isoform X21.11e-1194.29Show/hide
Query:  RARMVLHHQISTSDVEYTLSCFQQTLNGIAAADGN
        RARMVLHHQISTSDVEYTLSCFQQTL+GIAAA GN
Subjt:  RARMVLHHQISTSDVEYTLSCFQQTLNGIAAADGN

SwissProt top hitse value%identityAlignment
Q8RXU4 Probable low-specificity L-threonine aldolase 12.3e-0473.08Show/hide
Query:  RARMVLHHQISTSDVEYTLSCFQQTL
        R R+V+HHQI+TSDV YTLSCFQQ +
Subjt:  RARMVLHHQISTSDVEYTLSCFQQTL

Arabidopsis top hitse value%identityAlignment
AT1G08630.1 threonine aldolase 11.6e-0573.08Show/hide
Query:  RARMVLHHQISTSDVEYTLSCFQQTL
        R R+V+HHQI+TSDV YTLSCFQQ +
Subjt:  RARMVLHHQISTSDVEYTLSCFQQTL

AT1G08630.2 threonine aldolase 11.6e-0573.08Show/hide
Query:  RARMVLHHQISTSDVEYTLSCFQQTL
        R R+V+HHQI+TSDV YTLSCFQQ +
Subjt:  RARMVLHHQISTSDVEYTLSCFQQTL

AT1G08630.3 threonine aldolase 11.6e-0573.08Show/hide
Query:  RARMVLHHQISTSDVEYTLSCFQQTL
        R R+V+HHQI+TSDV YTLSCFQQ +
Subjt:  RARMVLHHQISTSDVEYTLSCFQQTL

AT1G08630.4 threonine aldolase 11.6e-0573.08Show/hide
Query:  RARMVLHHQISTSDVEYTLSCFQQTL
        R R+V+HHQI+TSDV YTLSCFQQ +
Subjt:  RARMVLHHQISTSDVEYTLSCFQQTL

AT1G08630.5 threonine aldolase 11.6e-0573.08Show/hide
Query:  RARMVLHHQISTSDVEYTLSCFQQTL
        R R+V+HHQI+TSDV YTLSCFQQ +
Subjt:  RARMVLHHQISTSDVEYTLSCFQQTL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTTAAACTTCACATTGACGGAGCTCGTATTTTCAATGCTTCGATTGCACTTGGTGTTTCTGTTGATCGATTGGTACAAACGGCTGACTCAGTATCAGTTTGCCTA
TCAAAAGGTTTGGGTGCACCCGTTGGGTCAGTTATCGTTGGCTCCAAAAGCTTCATTGCCAAGGGCTCGAATGGTTCTCCATCATCAAATCTCAACGAGTGATGTGGAGT
ATACTTTATCTTGTTTTCAGCAAACTCTGAATGGAATAGCAGCGGCAGATGGCAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTTAAACTTCACATTGACGGAGCTCGTATTTTCAATGCTTCGATTGCACTTGGTGTTTCTGTTGATCGATTGGTACAAACGGCTGACTCAGTATCAGTTTGCCTA
TCAAAAGGTTTGGGTGCACCCGTTGGGTCAGTTATCGTTGGCTCCAAAAGCTTCATTGCCAAGGGCTCGAATGGTTCTCCATCATCAAATCTCAACGAGTGATGTGGAGT
ATACTTTATCTTGTTTTCAGCAAACTCTGAATGGAATAGCAGCGGCAGATGGCAACTAA
Protein sequenceShow/hide protein sequence
MALNFTLTELVFSMLRLHLVFLLIDWYKRLTQYQFAYQKVWVHPLGQLSLAPKASLPRARMVLHHQISTSDVEYTLSCFQQTLNGIAAADGN