CuGenDBv2

Gene ID	Csor.00g181580
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	EF-hand domain-containing protein
Genome location	Csor_Chr14:16027468..16030383
RNA-Seq Expression	Csor.00g181580
Synteny	Csor.00g181580
Gene Ontology terms	GO:0005509 - calcium ion binding (molecular function) GO:0048306 - calcium-dependent protein binding (molecular function)
InterPro domains	IPR002048 - EF-hand domain IPR011992 - EF-hand domain pair

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6582540.1 hypothetical protein SDJN03_22542, partial [Cucurbita argyrosperma subsp. sororia]

5.22e-138

100

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Query:  MINFDIVAATAEIFIFLCLERRFQLQSGAALRGLGSSIAVRMRKALGRFGGKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLLVYNDINKRLPIS
        MINFDIVAATAEIFIFLCLERRFQLQSGAALRGLGSSIAVRMRKALGRFGGKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLLVYNDINKRLPIS
Subjt:  MINFDIVAATAEIFIFLCLERRFQLQSGAALRGLGSSIAVRMRKALGRFGGKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLLVYNDINKRLPIS

Query:  HLDPPTEERFRELIKENDWNQDKKIGRDEFLGFILSLTSDAFISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQ
        HLDPPTEERFRELIKENDWNQDKKIGRDEFLGFILSLTSDAFISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQ
Subjt:  HLDPPTEERFRELIKENDWNQDKKIGRDEFLGFILSLTSDAFISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQ

Query:  KPMLK
        KPMLK
Subjt:  KPMLK

KAG7018923.1 hypothetical protein SDJN02_20800, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.10e-113

84.02

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Query:  MINFDIVAATAEIFIFLCLERRFQLQSGAALRGLGSSIAVRMRKALGRFGGKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLLVYN---------
        MINFDIVAATAEIFIFLCLERRFQLQSGAALRG                  KEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLL  +         
Subjt:  MINFDIVAATAEIFIFLCLERRFQLQSGAALRGLGSSIAVRMRKALGRFGGKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLLVYN---------

Query:  -----DINKRLPISHLDPPTEERFRELIKENDWNQDKKIGRDEFLGFILSLTSDAFISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYA
             DINKRLPISHLDPPTEERFRELIKENDWNQDKKIGRDEFLGFILSLTSDAFISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYA
Subjt:  -----DINKRLPISHLDPPTEERFRELIKENDWNQDKKIGRDEFLGFILSLTSDAFISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYA

Query:  FLVTLAAFVFQNSQKPMLK
        FLVTLAAFVFQNSQKPMLK
Subjt:  FLVTLAAFVFQNSQKPMLK

XP_022924303.1 uncharacterized protein LOC111431834 [Cucurbita moschata]

9.27e-109

99.39

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Query:  MRKALGRFGGKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLLVYNDINKRLPISHLDPPTEERFRELIKENDWNQDKKIGRDEFLGFILSLTSDA
        MRKALGRFGGKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLLVYNDINKRLPISHLDPPTEERFRELIKENDWNQDKKIGRDEFLGFILSLTSDA
Subjt:  MRKALGRFGGKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLLVYNDINKRLPISHLDPPTEERFRELIKENDWNQDKKIGRDEFLGFILSLTSDA

Query:  FISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQKPMLK
        FISLSHRLILTLVIAPTVAVVTKRSTEGIPV+GSLVQKLPSSAYAFLVTLAAFVFQNSQKPMLK
Subjt:  FISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQKPMLK

XP_022980436.1 uncharacterized protein LOC111479803 [Cucurbita maxima]

1.54e-107

98.17

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Query:  MRKALGRFGGKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLLVYNDINKRLPISHLDPPTEERFRELIKENDWNQDKKIGRDEFLGFILSLTSDA
        MRKALGRFGGKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLLVYNDINKRLPISHLDPPTEERFR+L+KENDWN+DKKIGRDEFLGFILSLTSDA
Subjt:  MRKALGRFGGKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLLVYNDINKRLPISHLDPPTEERFRELIKENDWNQDKKIGRDEFLGFILSLTSDA

Query:  FISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQKPMLK
        FISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQKPMLK
Subjt:  FISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQKPMLK

XP_023528258.1 uncharacterized protein LOC111791228 [Cucurbita pepo subsp. pepo]

6.53e-109

100

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Query:  MRKALGRFGGKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLLVYNDINKRLPISHLDPPTEERFRELIKENDWNQDKKIGRDEFLGFILSLTSDA
        MRKALGRFGGKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLLVYNDINKRLPISHLDPPTEERFRELIKENDWNQDKKIGRDEFLGFILSLTSDA
Subjt:  MRKALGRFGGKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLLVYNDINKRLPISHLDPPTEERFRELIKENDWNQDKKIGRDEFLGFILSLTSDA

Query:  FISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQKPMLK
        FISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQKPMLK
Subjt:  FISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQKPMLK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L6I0 EF-hand domain-containing protein

6.34e-62

62.2

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Query:  MRKALGRFGGKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLLVYNDINKRLPISHLDPPTEERFRELIKENDWNQDKKIGRDEFLGFILSLTSDA
        M +A  R GGKEWR+ QL NIS++IFD  G  K++LSFEDLYIATLLV+NDINK LP  H+DPP ++R +E+++  D NQ+  I R+EFL F+  LTS++
Subjt:  MRKALGRFGGKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLLVYNDINKRLPISHLDPPTEERFRELIKENDWNQDKKIGRDEFLGFILSLTSDA

Query:  FISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQKPMLK
        FIS+S RLI+TLV+APT+AVVTK+STEG+P +G +VQK+PSSAYA LVTLAA +FQNS++ +LK
Subjt:  FISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQKPMLK

A0A5A7U485 EF-hand domain-containing protein

2.57e-61

62.8

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Query:  MRKALGRFGGKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLLVYNDINKRLPISHLDPPTEERFRELIKENDWNQDKKIGRDEFLGFILSLTSDA
        M +AL RFGG++W+++QL  IS++IFD     K+KLSFEDLYIATLLV+NDINK LP  H+DPPT+ER  EL++++D N+++ I RDEFL FI  LT ++
Subjt:  MRKALGRFGGKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLLVYNDINKRLPISHLDPPTEERFRELIKENDWNQDKKIGRDEFLGFILSLTSDA

Query:  FISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQKPMLK
          S+S RLI+TLV+APT+AVVTKRSTEGIP +G +VQK+PSSAYA LVTLAA +FQNS + +LK
Subjt:  FISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQKPMLK

A0A6J1D109 uncharacterized protein LOC111016024

3.22e-62

60.45

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Query:  SGAALRGLGSSIAVRMRKALGRFGGKEWRDEQLRNISDRIFDMIGDKKDK--LSFEDLYIATLLVYNDINKRLPISHLDPPTEERFRELIKENDWNQDKK
        +G  +     S+   M + L + GGK+WRD Q+R ISD+IF+ I +  DK  LSFEDLYIATLLVYN+INKRLP  H DPP++ER RELIKE+D N D++
Subjt:  SGAALRGLGSSIAVRMRKALGRFGGKEWRDEQLRNISDRIFDMIGDKKDK--LSFEDLYIATLLVYNDINKRLPISHLDPPTEERFRELIKENDWNQDKK

Query:  IGRDEFLGFILSLTSDAFISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQK
        I R+EF+ FIL LTSD  I++S  L+LTLV+APTVAVVTK+STEG+P VG LVQKLP+S YA L+TLAA  FQN+ +
Subjt:  IGRDEFLGFILSLTSDAFISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQK

A0A6J1EC16 uncharacterized protein LOC111431834

4.49e-109

99.39

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Query:  MRKALGRFGGKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLLVYNDINKRLPISHLDPPTEERFRELIKENDWNQDKKIGRDEFLGFILSLTSDA
        MRKALGRFGGKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLLVYNDINKRLPISHLDPPTEERFRELIKENDWNQDKKIGRDEFLGFILSLTSDA
Subjt:  MRKALGRFGGKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLLVYNDINKRLPISHLDPPTEERFRELIKENDWNQDKKIGRDEFLGFILSLTSDA

Query:  FISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQKPMLK
        FISLSHRLILTLVIAPTVAVVTKRSTEGIPV+GSLVQKLPSSAYAFLVTLAAFVFQNSQKPMLK
Subjt:  FISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQKPMLK

A0A6J1ITL1 uncharacterized protein LOC111479803

7.43e-108

98.17

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Query:  MRKALGRFGGKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLLVYNDINKRLPISHLDPPTEERFRELIKENDWNQDKKIGRDEFLGFILSLTSDA
        MRKALGRFGGKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLLVYNDINKRLPISHLDPPTEERFR+L+KENDWN+DKKIGRDEFLGFILSLTSDA
Subjt:  MRKALGRFGGKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLLVYNDINKRLPISHLDPPTEERFRELIKENDWNQDKKIGRDEFLGFILSLTSDA

Query:  FISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQKPMLK
        FISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQKPMLK
Subjt:  FISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQKPMLK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G64850.1 Calcium-binding EF hand family protein

5.8e-35

49.02

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Query:  MRKALGRFGGKEWRDEQLRNISDRIFD--MIGDKKDKLSFEDLYIATLLVYNDINKRLPISHLDPPTEERFRELIKENDWNQDKKIGRDEFLGFILSLTS
        M +   +  GKEWR +Q++ I DR+FD   +   +  L+FE+LYIA LLVYNDINKRLP  H DPP+++    ++ + D N D ++ R+EF+ FI  +T+
Subjt:  MRKALGRFGGKEWRDEQLRNISDRIFD--MIGDKKDKLSFEDLYIATLLVYNDINKRLPISHLDPPTEERFRELIKENDWNQDKKIGRDEFLGFILSLTS

Query:  DAFISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLA
        + F  +S  LI+ L++APTVA+ TK++TEG+P VG +VQKLP+S YA LVTLA
Subjt:  DAFISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLA

AT4G37445.1 BEST Arabidopsis thaliana protein match is: Calcium-binding EF hand family protein (TAIR:AT1G64850.1)

8.1e-05

24.58

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Query:  SFEDLYIATLLVYNDINKRLPISHLDPPTEERFRELIKENDWNQDKKIGRDEFLGFILSLTSDAFISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLV
        +F+D ++A L ++N+ N  LP  H D PT ++ +         +D++  +  F+ F+      +   L    ++T +++P  A+  KR+ E +P +  L+
Subjt:  SFEDLYIATLLVYNDINKRLPISHLDPPTEERFRELIKENDWNQDKKIGRDEFLGFILSLTSDAFISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLV

Query:  QKLPSSAYAFLVTLAAFV
        + +P   +   VT+ A V
Subjt:  QKLPSSAYAFLVTLAAFV

Sequences

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CDS sequence

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ATGATAAATTTCGATATCGTTGCTGCTACGGCGGAGATCTTCATCTTCCTTTGCCTGGAGCGCCGATTTCAATTACAGTCGGGGGCTGCTTTGCGAGGTCTGGGATCTTC
AATCGCCGTTAGAATGAGAAAGGCCTTGGGGAGATTTGGAGGCAAAGAATGGAGGGACGAGCAATTGAGGAATATATCAGATAGAATATTTGATATGATTGGAGATAAGA
AGGATAAGCTGTCGTTTGAAGATCTGTACATTGCTACGTTACTTGTATACAATGATATTAACAAGCGGTTGCCTATCTCTCATCTTGATCCGCCCACAGAGGAACGTTTC
AGAGAGCTCATAAAGGAGAACGACTGGAACCAGGATAAAAAAATTGGGCGTGACGAATTCTTGGGTTTTATACTGAGCTTGACATCTGACGCGTTCATATCACTGAGCCA
CAGATTGATCCTCACTTTGGTGATAGCACCAACAGTCGCAGTGGTCACAAAGAGAAGTACTGAAGGCATCCCAGTCGTTGGAAGCCTGGTCCAAAAACTGCCCTCTTCAG
CTTATGCTTTCCTCGTCACCCTTGCTGCTTTCGTGTTTCAAAACTCTCAGAAGCCGATGCTTAAATGA

mRNA sequence

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Protein sequence

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MINFDIVAATAEIFIFLCLERRFQLQSGAALRGLGSSIAVRMRKALGRFGGKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLLVYNDINKRLPISHLDPPTEERF
RELIKENDWNQDKKIGRDEFLGFILSLTSDAFISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQKPMLK

Csor.00g181580 (gene) of Silver-seed gourd (wild; sororia) v1 genome