; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Csor.00g191380 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g191380
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionNuclear transcription factor Y subunit B-3
Genome locationCsor_Chr01:9234512..9235228
RNA-Seq ExpressionCsor.00g191380
SyntenyCsor.00g191380
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607751.1 hypothetical protein SDJN03_01093, partial [Cucurbita argyrosperma subsp. sororia]9.49e-155100Show/hide
Query:  MEKFTDHCASLCSSSSPPPPSSSSSSSSSSSKQSRLNVVVVSTLLASICFLSLRFSPSFLSLLILLLIPSFFFLANKKSDSSQISDRNPLLISTAGHLFD
        MEKFTDHCASLCSSSSPPPPSSSSSSSSSSSKQSRLNVVVVSTLLASICFLSLRFSPSFLSLLILLLIPSFFFLANKKSDSSQISDRNPLLISTAGHLFD
Subjt:  MEKFTDHCASLCSSSSPPPPSSSSSSSSSSSKQSRLNVVVVSTLLASICFLSLRFSPSFLSLLILLLIPSFFFLANKKSDSSQISDRNPLLISTAGHLFD

Query:  EKPQRTVEELSAAQIGEELSSDDDSSSNGGFESGGDFESDLWMCLDELARNLPFSDDSSSEDDDSLIEIPLLPYSDAIRTDSNRELVRNLETCLPDLLPD
        EKPQRTVEELSAAQIGEELSSDDDSSSNGGFESGGDFESDLWMCLDELARNLPFSDDSSSEDDDSLIEIPLLPYSDAIRTDSNRELVRNLETCLPDLLPD
Subjt:  EKPQRTVEELSAAQIGEELSSDDDSSSNGGFESGGDFESDLWMCLDELARNLPFSDDSSSEDDDSLIEIPLLPYSDAIRTDSNRELVRNLETCLPDLLPD

Query:  SVLKQNGFVELLEEINEEDNLIEIDISRGFNRVSTVCN
        SVLKQNGFVELLEEINEEDNLIEIDISRGFNRVSTVCN
Subjt:  SVLKQNGFVELLEEINEEDNLIEIDISRGFNRVSTVCN

XP_022941469.1 uncharacterized protein LOC111446758 [Cucurbita moschata]1.64e-15098.74Show/hide
Query:  MEKFTDHCASLCSSSSPPPPSSSSSSSSSSSKQSRLNVVVVSTLLASICFLSLRFSPSFLSLLILLLIPSFFFLANKKSDSSQISDRNPLLISTAGHLFD
        MEKFTDHCASLCSSSSPPP  SSSSSSSSSSKQSRLNVVVVSTLLASICFLSLRFSPSFLSLLILLLIPSFFFLANKKSDSSQISDRNPLLISTAGHLFD
Subjt:  MEKFTDHCASLCSSSSPPPPSSSSSSSSSSSKQSRLNVVVVSTLLASICFLSLRFSPSFLSLLILLLIPSFFFLANKKSDSSQISDRNPLLISTAGHLFD

Query:  EKPQRTVEELSAAQIGEELSSDDDSSSNGGFESGGDFESDLWMCLDELARNLPFSDDSSSEDDDSLIEIPLLPYSDAIRTDSNRELVRNLETCLPDLLPD
        EKPQRTVEELSAAQIGEELSSDDDSSSNGGFESGGDFESDLWMCLDEL RNLPFSDDSSSEDDDSLIEIPLLPYSDAIRTDSNRELVRNLETCLPDLLPD
Subjt:  EKPQRTVEELSAAQIGEELSSDDDSSSNGGFESGGDFESDLWMCLDELARNLPFSDDSSSEDDDSLIEIPLLPYSDAIRTDSNRELVRNLETCLPDLLPD

Query:  SVLKQNGFVELLEEINEEDNLIEIDISRGFNRVSTVCN
        SVLKQNGFVELLEEINEEDNLIEIDISRGFNRVSTVCN
Subjt:  SVLKQNGFVELLEEINEEDNLIEIDISRGFNRVSTVCN

XP_022981598.1 uncharacterized protein LOC111480668 [Cucurbita maxima]1.03e-14596.64Show/hide
Query:  MEKFTDHCASLCSSSSPPPPSSSSSSSSSSSKQSRLNVVVVSTLLASICFLSLRFSPSFLSLLILLLIPSFFFLANKKSDSSQISDRNPLLISTAGHLFD
        MEKFTDHCASLCSSSSPP      SSSSSSSKQSRLNVVVVSTLLASICFLSLRFSPSFLSLL LLLIPSFFFLANKKSDSSQISDRNPLLISTAGHLFD
Subjt:  MEKFTDHCASLCSSSSPPPPSSSSSSSSSSSKQSRLNVVVVSTLLASICFLSLRFSPSFLSLLILLLIPSFFFLANKKSDSSQISDRNPLLISTAGHLFD

Query:  EKPQRTVEELSAAQIGEELSSDDDSSSNGGFESGGDFESDLWMCLDELARNLPFSDDSSSEDDDSLIEIPLLPYSDAIRTDSNRELVRNLETCLPDLLPD
        EKPQRTVEELSAAQIGEELSSDDDSSSNGGFESGGDFESDLWMCLDELARNLPFSDDSSSEDDDSLIEIPLLPYSDAIRTDSNR LVRNLETCLPDLLPD
Subjt:  EKPQRTVEELSAAQIGEELSSDDDSSSNGGFESGGDFESDLWMCLDELARNLPFSDDSSSEDDDSLIEIPLLPYSDAIRTDSNRELVRNLETCLPDLLPD

Query:  SVLKQNGFVELLEEINEEDNLIEIDISRGFNRVSTVCN
        SVLKQNGFVELLEEINEEDNLIEIDISRGFNRVSTVCN
Subjt:  SVLKQNGFVELLEEINEEDNLIEIDISRGFNRVSTVCN

XP_023524758.1 uncharacterized protein LOC111788599 isoform X1 [Cucurbita pepo subsp. pepo]6.72e-15095.53Show/hide
Query:  MEKFTDHCASLCSSSSPPPP--------SSSSSSSSSSSKQSRLNVVVVSTLLASICFLSLRFSPSFLSLLILLLIPSFFFLANKKSDSSQISDRNPLLI
        MEKFTDHCASLCSSSSPPPP        SSSSSSSSSSSKQSRLNVVVVSTLLASICFLSLRFSPSFL+LL+LLLIPSFFFLANKKSDSSQISDRNPLLI
Subjt:  MEKFTDHCASLCSSSSPPPP--------SSSSSSSSSSSKQSRLNVVVVSTLLASICFLSLRFSPSFLSLLILLLIPSFFFLANKKSDSSQISDRNPLLI

Query:  STAGHLFDEKPQRTVEELSAAQIGEELSSDDDSSSNGGFESGGDFESDLWMCLDELARNLPFSDDSSSEDDDSLIEIPLLPYSDAIRTDSNRELVRNLET
        STAGHLFDEKPQRTVEELSAAQIGEELSSDDDSSSNGGFESGGDFESDLWMCLDELA NLPFSDDSSSEDDDSLIEIPLLPYSDAIRTDSNRELVRNLET
Subjt:  STAGHLFDEKPQRTVEELSAAQIGEELSSDDDSSSNGGFESGGDFESDLWMCLDELARNLPFSDDSSSEDDDSLIEIPLLPYSDAIRTDSNRELVRNLET

Query:  CLPDLLPDSVLKQNGFVELLEEINEEDNLIEIDISRGFNRVSTVCN
        CLPDLLPDSVLKQNGFVELLEEINEEDNLIEIDISRGFNRVSTVCN
Subjt:  CLPDLLPDSVLKQNGFVELLEEINEEDNLIEIDISRGFNRVSTVCN

XP_023524760.1 uncharacterized protein LOC111788599 isoform X2 [Cucurbita pepo subsp. pepo]1.34e-14997.48Show/hide
Query:  MEKFTDHCASLCSSSSPPPPSSSSSSSSSSSKQSRLNVVVVSTLLASICFLSLRFSPSFLSLLILLLIPSFFFLANKKSDSSQISDRNPLLISTAGHLFD
        MEKFTDHCASLCSSSSPPPP SSSSSS  SSKQSRLNVVVVSTLLASICFLSLRFSPSFL+LL+LLLIPSFFFLANKKSDSSQISDRNPLLISTAGHLFD
Subjt:  MEKFTDHCASLCSSSSPPPPSSSSSSSSSSSKQSRLNVVVVSTLLASICFLSLRFSPSFLSLLILLLIPSFFFLANKKSDSSQISDRNPLLISTAGHLFD

Query:  EKPQRTVEELSAAQIGEELSSDDDSSSNGGFESGGDFESDLWMCLDELARNLPFSDDSSSEDDDSLIEIPLLPYSDAIRTDSNRELVRNLETCLPDLLPD
        EKPQRTVEELSAAQIGEELSSDDDSSSNGGFESGGDFESDLWMCLDELA NLPFSDDSSSEDDDSLIEIPLLPYSDAIRTDSNRELVRNLETCLPDLLPD
Subjt:  EKPQRTVEELSAAQIGEELSSDDDSSSNGGFESGGDFESDLWMCLDELARNLPFSDDSSSEDDDSLIEIPLLPYSDAIRTDSNRELVRNLETCLPDLLPD

Query:  SVLKQNGFVELLEEINEEDNLIEIDISRGFNRVSTVCN
        SVLKQNGFVELLEEINEEDNLIEIDISRGFNRVSTVCN
Subjt:  SVLKQNGFVELLEEINEEDNLIEIDISRGFNRVSTVCN

TrEMBL top hitse value%identityAlignment
A0A0A0K6W9 Uncharacterized protein1.63e-7460.82Show/hide
Query:  MEKFTDHCASLCSSSSPPPPSSSSSSSSSSSKQSRLNVVVVSTLLASICFLSLRFSPSFLSLLILLLIPSFFFLANKKSDSSQISDRNPLLISTAGHLFD
        MEKFT HC+SL             +SSSS   QSR N+ + STLLASI FL+LRFSPSF +LL+LLLIP+  F+ANKKS        NPL      HLFD
Subjt:  MEKFTDHCASLCSSSSPPPPSSSSSSSSSSSKQSRLNVVVVSTLLASICFLSLRFSPSFLSLLILLLIPSFFFLANKKSDSSQISDRNPLLISTAGHLFD

Query:  EKPQRTVEELSAAQIGEELSSDDD----SSSNGGFESGGDFESDLWMCLDELARNLPFSDDSSS---EDDDSLIEIPLLPYSDAIRTDSNRELVRNLETC
        E PQ T  + S  QIG+ +SSDD+    SSSN G    GDF+SDLWM LDEL RNLP S+D SS   +DDDSLIEIPLLP S+ IR         NLETC
Subjt:  EKPQRTVEELSAAQIGEELSSDDD----SSSNGGFESGGDFESDLWMCLDELARNLPFSDDSSS---EDDDSLIEIPLLPYSDAIRTDSNRELVRNLETC

Query:  LPDLLPDSVLKQNGFVELLEEINEEDNLIEIDISRGFNRVSTVCN
        LP+LLPDSVL+Q+GFVELLEEINEEDNLIEIDIS+GFNR  TVCN
Subjt:  LPDLLPDSVLKQNGFVELLEEINEEDNLIEIDISRGFNRVSTVCN

A0A2N9IRF2 Uncharacterized protein3.42e-1535.93Show/hide
Query:  SRLNVVVVSTLLASICF---LSLRFSPSFLSLLILLLIPSFFF--LANKK--------SDSSQISDRNPLLISTAGHLFDEKPQRTVEELSAAQIGEE--
        SR +++ V+ L+ S+ F   +S  FSP+ L  + +L++ + F   L+ KK         D   I D+  LL +  G    + PQ  +E     ++ +E  
Subjt:  SRLNVVVVSTLLASICF---LSLRFSPSFLSLLILLLIPSFFF--LANKK--------SDSSQISDRNPLLISTAGHLFDEKPQRTVEELSAAQIGEE--

Query:  --------LSSDDDSSSNGGFESGGD------FESDLWMCLDELARNLPFSDDS-SSEDDDSLIEIPLLPYSDAIRTDSNRELVRNLETCLPDLLPDSVL
                + S  D+      ES  D      FE +L MC + + +NL FSD S S EDDDSLIEI  LP S +   D   E  +  ++ LPDLLP+S+ 
Subjt:  --------LSSDDDSSSNGGFESGGD------FESDLWMCLDELARNLPFSDDS-SSEDDDSLIEIPLLPYSDAIRTDSNRELVRNLETCLPDLLPDSVL

Query:  KQNGFVELLEEINE---EDNLIEIDISRGFN
        +Q G +ELL EINE   E+NLIEID+S G N
Subjt:  KQNGFVELLEEINE---EDNLIEIDISRGFN

A0A5D3C7W2 Uncharacterized protein1.32e-6958.63Show/hide
Query:  MEKFTDHCASLCSSSSPPPPSSSSSSSSSSSKQSRLNVVVVSTLLASICFL-SLRFSPSFLSLLILLLIPSFFFLANKKSDSSQISDRNPLLISTAGHLF
        MEKFT HC+SL             +SSSS   QSR N+ + STLLASI FL +LRFSPSF +LL+LLL+P+  FLAN+KS             S   HLF
Subjt:  MEKFTDHCASLCSSSSPPPPSSSSSSSSSSSKQSRLNVVVVSTLLASICFL-SLRFSPSFLSLLILLLIPSFFFLANKKSDSSQISDRNPLLISTAGHLF

Query:  DEKPQRTVEELSAAQIGEELSSDDDSS-------SNGGFESGGDFESDLWMCLDELARNLPFSDDSSS---EDDDSLIEIPLLPYSDAIRTDSNRELVRN
        DEK   T  + SA  IGE  SSDD++S       SN G    GDF+SDLWM LDEL RNLP S+D SS   +DDDSLIEIPLLP S+ IR         N
Subjt:  DEKPQRTVEELSAAQIGEELSSDDDSS-------SNGGFESGGDFESDLWMCLDELARNLPFSDDSSS---EDDDSLIEIPLLPYSDAIRTDSNRELVRN

Query:  LETCLPDLLPDSVLKQNGFVELLEEINEEDNLIEIDISRGFNRVSTVCN
        LETCLP+LLPDSVL+Q+GFVELLEEINEEDNLIEIDIS+GFNR STVCN
Subjt:  LETCLPDLLPDSVLKQNGFVELLEEINEEDNLIEIDISRGFNRVSTVCN

A0A6J1FNF5 uncharacterized protein LOC1114467587.92e-15198.74Show/hide
Query:  MEKFTDHCASLCSSSSPPPPSSSSSSSSSSSKQSRLNVVVVSTLLASICFLSLRFSPSFLSLLILLLIPSFFFLANKKSDSSQISDRNPLLISTAGHLFD
        MEKFTDHCASLCSSSSPPP  SSSSSSSSSSKQSRLNVVVVSTLLASICFLSLRFSPSFLSLLILLLIPSFFFLANKKSDSSQISDRNPLLISTAGHLFD
Subjt:  MEKFTDHCASLCSSSSPPPPSSSSSSSSSSSKQSRLNVVVVSTLLASICFLSLRFSPSFLSLLILLLIPSFFFLANKKSDSSQISDRNPLLISTAGHLFD

Query:  EKPQRTVEELSAAQIGEELSSDDDSSSNGGFESGGDFESDLWMCLDELARNLPFSDDSSSEDDDSLIEIPLLPYSDAIRTDSNRELVRNLETCLPDLLPD
        EKPQRTVEELSAAQIGEELSSDDDSSSNGGFESGGDFESDLWMCLDEL RNLPFSDDSSSEDDDSLIEIPLLPYSDAIRTDSNRELVRNLETCLPDLLPD
Subjt:  EKPQRTVEELSAAQIGEELSSDDDSSSNGGFESGGDFESDLWMCLDELARNLPFSDDSSSEDDDSLIEIPLLPYSDAIRTDSNRELVRNLETCLPDLLPD

Query:  SVLKQNGFVELLEEINEEDNLIEIDISRGFNRVSTVCN
        SVLKQNGFVELLEEINEEDNLIEIDISRGFNRVSTVCN
Subjt:  SVLKQNGFVELLEEINEEDNLIEIDISRGFNRVSTVCN

A0A6J1J2I9 uncharacterized protein LOC1114806684.98e-14696.64Show/hide
Query:  MEKFTDHCASLCSSSSPPPPSSSSSSSSSSSKQSRLNVVVVSTLLASICFLSLRFSPSFLSLLILLLIPSFFFLANKKSDSSQISDRNPLLISTAGHLFD
        MEKFTDHCASLCSSSSPP      SSSSSSSKQSRLNVVVVSTLLASICFLSLRFSPSFLSLL LLLIPSFFFLANKKSDSSQISDRNPLLISTAGHLFD
Subjt:  MEKFTDHCASLCSSSSPPPPSSSSSSSSSSSKQSRLNVVVVSTLLASICFLSLRFSPSFLSLLILLLIPSFFFLANKKSDSSQISDRNPLLISTAGHLFD

Query:  EKPQRTVEELSAAQIGEELSSDDDSSSNGGFESGGDFESDLWMCLDELARNLPFSDDSSSEDDDSLIEIPLLPYSDAIRTDSNRELVRNLETCLPDLLPD
        EKPQRTVEELSAAQIGEELSSDDDSSSNGGFESGGDFESDLWMCLDELARNLPFSDDSSSEDDDSLIEIPLLPYSDAIRTDSNR LVRNLETCLPDLLPD
Subjt:  EKPQRTVEELSAAQIGEELSSDDDSSSNGGFESGGDFESDLWMCLDELARNLPFSDDSSSEDDDSLIEIPLLPYSDAIRTDSNRELVRNLETCLPDLLPD

Query:  SVLKQNGFVELLEEINEEDNLIEIDISRGFNRVSTVCN
        SVLKQNGFVELLEEINEEDNLIEIDISRGFNRVSTVCN
Subjt:  SVLKQNGFVELLEEINEEDNLIEIDISRGFNRVSTVCN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGTTCACAGACCACTGCGCTTCACTCTGTTCATCATCATCGCCGCCGCCGCCGTCGTCGTCGTCGTCGTCGTCTTCTTCTTCTTCCAAACAATCACGC
CTCAATGTTGTCGTTGTTTCAACTCTTCTAGCTTCAATTTGCTTTCTCAGTCTCCGATTCTCACCTTCCTTCCTTAGTCTTCTTATTCTTCTTCTAATCCCTTCG
TTTTTCTTCCTCGCGAACAAAAAATCCGATTCCAGTCAAATCTCGGACCGGAATCCGCTTCTCATCTCCACCGCCGGCCACCTGTTCGACGAAAAGCCTCAAAGA
ACAGTGGAAGAACTATCCGCCGCGCAAATCGGAGAAGAGCTTTCTTCTGATGATGATAGTAGCAGTAATGGCGGATTTGAAAGTGGCGGAGATTTCGAGTCCGAT
CTCTGGATGTGTTTGGACGAACTGGCTCGGAATCTTCCGTTCTCTGACGATTCGAGTTCCGAAGATGACGATAGCTTGATCGAAATTCCTCTTCTTCCATACTCG
GACGCGATTCGAACGGATTCGAACAGAGAATTAGTTCGAAATCTCGAGACGTGTTTGCCTGATTTGTTGCCGGATTCTGTCCTGAAACAGAACGGATTCGTGGAG
CTTTTGGAAGAGATCAACGAGGAAGATAACTTAATCGAGATCGATATTTCCAGAGGCTTCAATCGAGTTTCCACTGTTTGCAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGTTCACAGACCACTGCGCTTCACTCTGTTCATCATCATCGCCGCCGCCGCCGTCGTCGTCGTCGTCGTCGTCTTCTTCTTCTTCCAAACAATCACGC
CTCAATGTTGTCGTTGTTTCAACTCTTCTAGCTTCAATTTGCTTTCTCAGTCTCCGATTCTCACCTTCCTTCCTTAGTCTTCTTATTCTTCTTCTAATCCCTTCG
TTTTTCTTCCTCGCGAACAAAAAATCCGATTCCAGTCAAATCTCGGACCGGAATCCGCTTCTCATCTCCACCGCCGGCCACCTGTTCGACGAAAAGCCTCAAAGA
ACAGTGGAAGAACTATCCGCCGCGCAAATCGGAGAAGAGCTTTCTTCTGATGATGATAGTAGCAGTAATGGCGGATTTGAAAGTGGCGGAGATTTCGAGTCCGAT
CTCTGGATGTGTTTGGACGAACTGGCTCGGAATCTTCCGTTCTCTGACGATTCGAGTTCCGAAGATGACGATAGCTTGATCGAAATTCCTCTTCTTCCATACTCG
GACGCGATTCGAACGGATTCGAACAGAGAATTAGTTCGAAATCTCGAGACGTGTTTGCCTGATTTGTTGCCGGATTCTGTCCTGAAACAGAACGGATTCGTGGAG
CTTTTGGAAGAGATCAACGAGGAAGATAACTTAATCGAGATCGATATTTCCAGAGGCTTCAATCGAGTTTCCACTGTTTGCAACTGA
Protein sequenceShow/hide protein sequence
MEKFTDHCASLCSSSSPPPPSSSSSSSSSSSKQSRLNVVVVSTLLASICFLSLRFSPSFLSLLILLLIPSFFFLANKKSDSSQISDRNPLLISTAGHLFDEKPQR
TVEELSAAQIGEELSSDDDSSSNGGFESGGDFESDLWMCLDELARNLPFSDDSSSEDDDSLIEIPLLPYSDAIRTDSNRELVRNLETCLPDLLPDSVLKQNGFVE
LLEEINEEDNLIEIDISRGFNRVSTVCN