CuGenDBv2

Gene ID	Csor.00g192550
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Rab5-interacting
Genome location	Csor_Chr01:3179567..3181302
RNA-Seq Expression	Csor.00g192550
Synteny	Csor.00g192550
Gene Ontology terms	GO:0006996 - organelle organization (biological process) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR010742 - Rab5-interacting protein IPR029008 - Rab5-interacting protein family

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004145291.1 uncharacterized protein RAB5IF homolog [Cucumis sativus]

1.02e-81

93.7

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Query:  MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHG
        MKDGKS+KVNSQLQ QNGHLPPFKLA LFDPE SWDKDQLGDVLHWMRQSVALVCGLLWGS+PLVGG+WFILFLVISTTM+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLVYSLGHF
        VLLQEGLFASITLFLLMWTL+YSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLVYSLGHF

XP_008457469.1 PREDICTED: uncharacterized protein C20orf24 homolog [Cucumis melo]

2.68e-84

93.7

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Query:  MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHG
        MKDGK++KVNSQLQHQNGHLPPFKLA LFDPE SWDKDQLGDVLHWMRQSVALVCGLLWGS+PLVGGIWFILFLVISTTM+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLVYSLGHF
        VLLQEGLFAS+TLFLLMWTL+YSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLVYSLGHF

XP_022948613.1 uncharacterized protein C20orf24 homolog [Cucurbita moschata]

2.38e-87

100

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Query:  MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHG
        MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLVYSLGHF
        VLLQEGLFASITLFLLMWTLVYSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLVYSLGHF

XP_022998338.1 uncharacterized protein C20orf24 homolog [Cucurbita maxima]

6.83e-87

99.21

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Query:  MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHG
        MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFI+FLVISTTMVYGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLVYSLGHF
        VLLQEGLFASITLFLLMWTLVYSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLVYSLGHF

XP_038895585.1 respirasome Complex Assembly Factor 1-like isoform X2 [Benincasa hispida]

9.34e-85

96.06

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Query:  MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHG
        MKDGKS KVNSQLQHQNGHLPPFKLA LFDPE SWDKDQLGDVLHWMRQSVALVCGLLWGS+PLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLVYSLGHF
        VLLQEGLFASITLFLLMWTL+YSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLVYSLGHF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LY22 Uncharacterized protein

4.92e-82

93.7

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Query:  MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHG
        MKDGKS+KVNSQLQ QNGHLPPFKLA LFDPE SWDKDQLGDVLHWMRQSVALVCGLLWGS+PLVGG+WFILFLVISTTM+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLVYSLGHF
        VLLQEGLFASITLFLLMWTL+YSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLVYSLGHF

A0A1S3C692 uncharacterized protein C20orf24 homolog

1.30e-84

93.7

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Query:  MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHG
        MKDGK++KVNSQLQHQNGHLPPFKLA LFDPE SWDKDQLGDVLHWMRQSVALVCGLLWGS+PLVGGIWFILFLVISTTM+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLVYSLGHF
        VLLQEGLFAS+TLFLLMWTL+YSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLVYSLGHF

A0A5A7VQ84 Rab5-interacting

3.28e-75

93.97

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Query:  MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHG
        MKDGK++KVNSQLQHQNGHLPPFKLA LFDPE SWDKDQLGDVLHWMRQSVALVCGLLWGS+PLVGGIWFILFLVISTTM+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLL
        VLLQEGLFAS+TLFLL
Subjt:  VLLQEGLFASITLFLL

A0A6J1G9S8 uncharacterized protein C20orf24 homolog

1.15e-87

100

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Query:  MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHG
        MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLVYSLGHF
        VLLQEGLFASITLFLLMWTLVYSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLVYSLGHF

A0A6J1KGG2 uncharacterized protein C20orf24 homolog

3.31e-87

99.21

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Query:  MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHG
        MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFI+FLVISTTMVYGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLVYSLGHF
        VLLQEGLFASITLFLLMWTLVYSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLVYSLGHF

SwissProt top hits

e value

%identity

Alignment

Q9BUV8 Respirasome Complex Assembly Factor 1

1.2e-14

34.65

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Query:  MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASW-DKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGH
        M  G+  +   Q Q  NG L     + +   +A+W DKD+  DV++W RQ +A+V G++WG +PL G +    F +I+  ++Y Y++  L++DEEE+GG 
Subjt:  MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASW-DKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGH

Query:  GVLLQEGLFASITLFLLMWTLVYSLGH
          L +EG   S  LF++     ++ GH
Subjt:  GVLLQEGLFASITLFLLMWTLVYSLGH

Q9CQT9 Respirasome Complex Assembly Factor 1

4.3e-17

35.94

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Query:  MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASW-DKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGH
        M  G+  +   Q Q  NG L     + +   +A+W DKD+  DV++W RQ +ALV G++WG +PL G +    F +I+  ++Y Y++  L++DEEE+GG 
Subjt:  MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASW-DKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGH

Query:  GVLLQEGLFASITLFLLMWTLVYSLGHF
          L +EG   S  LF+++W + Y+  H+
Subjt:  GVLLQEGLFASITLFLLMWTLVYSLGHF

Arabidopsis top hits

e value

%identity

Alignment

AT2G29020.1 Rab5-interacting family protein

4.8e-48

66.92

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Query:  MKDGKSIKVNS------QLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISTTMVYGYYAMILKVDEE
        MK+GKS K +S      Q+ HQN HL  F  A LFD EASWDKDQLGDVLHW+RQ V L+CGLLWG++PLVGGIW +LFL IS+ +VYGYYA++LK+DEE
Subjt:  MKDGKSIKVNS------QLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISTTMVYGYYAMILKVDEE

Query:  EFGGHGVLLQEGLFASITLFLLMWTLVYSLGHF
        +FGGH  LLQ+GLFAS++LFLL W LVYSL  F
Subjt:  EFGGHGVLLQEGLFASITLFLLMWTLVYSLGHF

AT5G59410.1 Rab5-interacting family protein

1.2e-51

74.62

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Query:  MKDGKSIKVN---SQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFG
        MK+ KS K+N    Q  HQN HL P KLA LFDP+ASWDKDQLGDVLHW+RQ V L+ GLLWGS+PLVGGIW ILFL IS+ +VYGYYAMILKVDEE+FG
Subjt:  MKDGKSIKVN---SQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFG

Query:  GHGVLLQEGLFASITLFLLMWTLVYSLGHF
        GH  LLQEGLFAS+TLFLL W LVYSL HF
Subjt:  GHGVLLQEGLFASITLFLLMWTLVYSLGHF

Sequences

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CDS sequence

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ATGAAGGACGGGAAGTCGATTAAGGTTAATTCTCAGTTGCAGCATCAGAATGGTCACTTGCCGCCGTTCAAATTGGCGAATTTGTTCGATCCAGAGGCTTCTTGGGATAA
GGATCAACTGGGAGATGTCTTGCATTGGATGCGACAGTCGGTTGCGCTTGTATGTGGGCTGCTTTGGGGTTCGGTACCTCTGGTTGGAGGGATTTGGTTCATCTTATTCT
TGGTGATATCAACCACAATGGTATATGGATACTATGCAATGATTTTGAAAGTAGACGAAGAAGAATTCGGGGGTCATGGAGTCCTCCTCCAGGAAGGGCTTTTTGCTTCC
ATAACTCTGTTTCTGCTTATGTGGACTCTCGTTTACAGCTTGGGACACTTCTGA

mRNA sequence

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Protein sequence

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MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFGGHGVLLQEGLFAS
ITLFLLMWTLVYSLGHF

Csor.00g192550 (gene) of Silver-seed gourd (wild; sororia) v1 genome