CuGenDBv2

Gene ID	Csor.00g199430
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	kinetochore protein SPC24 homolog
Genome location	Csor_Chr03:4501160..4501564
RNA-Seq Expression	Csor.00g199430
Synteny	Csor.00g199430
Gene Ontology terms	GO:0051983 - regulation of chromosome segregation (biological process)
InterPro domains	IPR044951 - Kinetochore protein SPC24-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6603568.1 Kinetochore protein SPC24-like protein, partial [Cucurbita argyrosperma subsp. sororia]

1.06e-67

100

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Query:  MADFAGKFNIEELLSYGDDLVALLNDQNDVQTLNQCLEHFKTLQSSCFDDFSNVQSSVQDYEKKIEACRQKTEEARTSTVSDDEIDILEKELGEELGKGN
        MADFAGKFNIEELLSYGDDLVALLNDQNDVQTLNQCLEHFKTLQSSCFDDFSNVQSSVQDYEKKIEACRQKTEEARTSTVSDDEIDILEKELGEELGKGN
Subjt:  MADFAGKFNIEELLSYGDDLVALLNDQNDVQTLNQCLEHFKTLQSSCFDDFSNVQSSVQDYEKKIEACRQKTEEARTSTVSDDEIDILEKELGEELGKGN

Query:  LLMEEIR
        LLMEEIR
Subjt:  LLMEEIR

XP_022144074.1 uncharacterized protein LOC111013852 isoform X1 [Momordica charantia]

1.11e-47

78.5

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Query:  MADFAGKFNIEELLSYGDDLVALLNDQNDVQTLNQCLEHFKTLQSSCFDDFSNVQSSVQDYEKKIEACRQKTEEARTSTVSDDEIDILEKELGEELGKGN
        M DF+GK NIEELLSYG+DLVALL DQ DVQTLNQCLEH K LQS C DDFSNV SSVQDYEKKIEACRQKTEEA+  TV+D E+D+LE+EL EEL K +
Subjt:  MADFAGKFNIEELLSYGDDLVALLNDQNDVQTLNQCLEHFKTLQSSCFDDFSNVQSSVQDYEKKIEACRQKTEEARTSTVSDDEIDILEKELGEELGKGN

Query:  LLMEEIR
        LLMEEIR
Subjt:  LLMEEIR

XP_022950424.1 uncharacterized protein LOC111453528 [Cucurbita moschata]

2.26e-66

100

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Query:  MADFAGKFNIEELLSYGDDLVALLNDQNDVQTLNQCLEHFKTLQSSCFDDFSNVQSSVQDYEKKIEACRQKTEEARTSTVSDDEIDILEKELGEELGKGN
        MADFAGKFNIEELLSYGDDLVALLNDQNDVQTLNQCLEHFKTLQSSCFDDFSNVQSSVQDYEKKIEACRQKTEEARTSTVSDDEIDILEKELGEELGKGN
Subjt:  MADFAGKFNIEELLSYGDDLVALLNDQNDVQTLNQCLEHFKTLQSSCFDDFSNVQSSVQDYEKKIEACRQKTEEARTSTVSDDEIDILEKELGEELGKGN

Query:  LLMEEIR
        LLMEEIR
Subjt:  LLMEEIR

XP_022978290.1 uncharacterized protein LOC111478320 [Cucurbita maxima]

2.15e-64

96.26

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Query:  MADFAGKFNIEELLSYGDDLVALLNDQNDVQTLNQCLEHFKTLQSSCFDDFSNVQSSVQDYEKKIEACRQKTEEARTSTVSDDEIDILEKELGEELGKGN
        MADFAGKFNIEE+LSYGDDLVALLNDQNDVQTLNQCLEHFKTLQSSCFDDFSNVQSSVQDYEKKIEACRQKTEEA+ STV+DDEIDILEKELGEELGKGN
Subjt:  MADFAGKFNIEELLSYGDDLVALLNDQNDVQTLNQCLEHFKTLQSSCFDDFSNVQSSVQDYEKKIEACRQKTEEARTSTVSDDEIDILEKELGEELGKGN

Query:  LLMEEIR
        LLMEEIR
Subjt:  LLMEEIR

XP_023544537.1 uncharacterized protein LOC111804085 [Cucurbita pepo subsp. pepo]

4.33e-64

97.2

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Query:  MADFAGKFNIEELLSYGDDLVALLNDQNDVQTLNQCLEHFKTLQSSCFDDFSNVQSSVQDYEKKIEACRQKTEEARTSTVSDDEIDILEKELGEELGKGN
        MADFAGKF IEELLSYGDDLVALLNDQNDVQTLNQCLEHFKTLQSSCFDDFSNVQSS QDYEKKIEACRQKTEEAR STVSDDEIDILEKELGEELGKGN
Subjt:  MADFAGKFNIEELLSYGDDLVALLNDQNDVQTLNQCLEHFKTLQSSCFDDFSNVQSSVQDYEKKIEACRQKTEEARTSTVSDDEIDILEKELGEELGKGN

Query:  LLMEEIR
        LLMEEIR
Subjt:  LLMEEIR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L002 Uncharacterized protein

1.98e-47

72.9

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Query:  MADFAGKFNIEELLSYGDDLVALLNDQNDVQTLNQCLEHFKTLQSSCFDDFSNVQSSVQDYEKKIEACRQKTEEARTSTVSDDEIDILEKELGEELGKGN
        M DFA   NIEEL S+ DDLVA+L D  DV+ LNQCLEHFKTLQSSC DDF++VQSS++DYEKKI+ACR+KTEEA+ +TV+DDE++ILEKEL EE+GKG+
Subjt:  MADFAGKFNIEELLSYGDDLVALLNDQNDVQTLNQCLEHFKTLQSSCFDDFSNVQSSVQDYEKKIEACRQKTEEARTSTVSDDEIDILEKELGEELGKGN

Query:  LLMEEIR
        LLMEEIR
Subjt:  LLMEEIR

A0A5D3CGK0 Uncharacterized protein

1.39e-47

73.83

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Query:  MADFAGKFNIEELLSYGDDLVALLNDQNDVQTLNQCLEHFKTLQSSCFDDFSNVQSSVQDYEKKIEACRQKTEEARTSTVSDDEIDILEKELGEELGKGN
        M DFA   NIEEL S+ DDLVA+L D  DV  LNQCLEHFKTLQSSC DDF++VQSSV+DYEKKI+ACR+KTEEA+ +TV+DDE++ILEKEL EE+GKG+
Subjt:  MADFAGKFNIEELLSYGDDLVALLNDQNDVQTLNQCLEHFKTLQSSCFDDFSNVQSSVQDYEKKIEACRQKTEEARTSTVSDDEIDILEKELGEELGKGN

Query:  LLMEEIR
        LLMEEIR
Subjt:  LLMEEIR

A0A6J1CR83 uncharacterized protein LOC111013852 isoform X1

5.39e-48

78.5

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Query:  MADFAGKFNIEELLSYGDDLVALLNDQNDVQTLNQCLEHFKTLQSSCFDDFSNVQSSVQDYEKKIEACRQKTEEARTSTVSDDEIDILEKELGEELGKGN
        M DF+GK NIEELLSYG+DLVALL DQ DVQTLNQCLEH K LQS C DDFSNV SSVQDYEKKIEACRQKTEEA+  TV+D E+D+LE+EL EEL K +
Subjt:  MADFAGKFNIEELLSYGDDLVALLNDQNDVQTLNQCLEHFKTLQSSCFDDFSNVQSSVQDYEKKIEACRQKTEEARTSTVSDDEIDILEKELGEELGKGN

Query:  LLMEEIR
        LLMEEIR
Subjt:  LLMEEIR

A0A6J1GFS1 uncharacterized protein LOC111453528

1.09e-66

100

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Query:  MADFAGKFNIEELLSYGDDLVALLNDQNDVQTLNQCLEHFKTLQSSCFDDFSNVQSSVQDYEKKIEACRQKTEEARTSTVSDDEIDILEKELGEELGKGN
        MADFAGKFNIEELLSYGDDLVALLNDQNDVQTLNQCLEHFKTLQSSCFDDFSNVQSSVQDYEKKIEACRQKTEEARTSTVSDDEIDILEKELGEELGKGN
Subjt:  MADFAGKFNIEELLSYGDDLVALLNDQNDVQTLNQCLEHFKTLQSSCFDDFSNVQSSVQDYEKKIEACRQKTEEARTSTVSDDEIDILEKELGEELGKGN

Query:  LLMEEIR
        LLMEEIR
Subjt:  LLMEEIR

A0A6J1IPN8 uncharacterized protein LOC111478320

1.04e-64

96.26

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Query:  MADFAGKFNIEELLSYGDDLVALLNDQNDVQTLNQCLEHFKTLQSSCFDDFSNVQSSVQDYEKKIEACRQKTEEARTSTVSDDEIDILEKELGEELGKGN
        MADFAGKFNIEE+LSYGDDLVALLNDQNDVQTLNQCLEHFKTLQSSCFDDFSNVQSSVQDYEKKIEACRQKTEEA+ STV+DDEIDILEKELGEELGKGN
Subjt:  MADFAGKFNIEELLSYGDDLVALLNDQNDVQTLNQCLEHFKTLQSSCFDDFSNVQSSVQDYEKKIEACRQKTEEARTSTVSDDEIDILEKELGEELGKGN

Query:  LLMEEIR
        LLMEEIR
Subjt:  LLMEEIR

SwissProt top hits

e value

%identity

Alignment

Q67XT3 Kinetochore protein SPC24 homolog

6.6e-19

42.99

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Query:  MADFAGKFNIEELLSYGDDLVALLNDQNDVQTLNQCLEHFKTLQSSCFDDFSNVQSSVQDYEKKIEACRQKTEEARTSTVSDDEIDILEKELGEELGKGN
        M + +  F+IE+L+SYGDDL+ LLN +N    ++Q  E FK L  +C +DF+ +Q S++D + K+ AC++KTEEA +   ++DEI+ L+KEL EE+ +  
Subjt:  MADFAGKFNIEELLSYGDDLVALLNDQNDVQTLNQCLEHFKTLQSSCFDDFSNVQSSVQDYEKKIEACRQKTEEARTSTVSDDEIDILEKELGEELGKGN

Query:  LLMEEIR
         L +E+R
Subjt:  LLMEEIR

Arabidopsis top hits

e value

%identity

Alignment

AT3G08880.1 unknown protein

4.7e-20

42.99

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Query:  MADFAGKFNIEELLSYGDDLVALLNDQNDVQTLNQCLEHFKTLQSSCFDDFSNVQSSVQDYEKKIEACRQKTEEARTSTVSDDEIDILEKELGEELGKGN
        M + +  F+IE+L+SYGDDL+ LLN +N    ++Q  E FK L  +C +DF+ +Q S++D + K+ AC++KTEEA +   ++DEI+ L+KEL EE+ +  
Subjt:  MADFAGKFNIEELLSYGDDLVALLNDQNDVQTLNQCLEHFKTLQSSCFDDFSNVQSSVQDYEKKIEACRQKTEEARTSTVSDDEIDILEKELGEELGKGN

Query:  LLMEEIR
         L +E+R
Subjt:  LLMEEIR

AT5G01570.1 unknown protein

9.1e-16

39.39

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Query:  NIEELLSYGDDLVALLNDQNDVQTLNQCLEHFKTLQSSCFDDFSNVQSSVQDYEKKIEACRQKTEEARTSTVSDDEIDILEKELGEELGKGNLLMEEIR
        N E ++S+GD+L+ +L+D+     L Q LE  + +  SC +DF  +  S+QD +KK++ C++KT+EA +    ++EI+ L+KEL EEL     L EE+R
Subjt:  NIEELLSYGDDLVALLNDQNDVQTLNQCLEHFKTLQSSCFDDFSNVQSSVQDYEKKIEACRQKTEEARTSTVSDDEIDILEKELGEELGKGNLLMEEIR

Sequences

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CDS sequence

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ATGGCAGATTTCGCCGGAAAGTTCAATATCGAGGAGCTTTTATCTTATGGCGACGATCTGGTAGCGCTCTTGAACGACCAAAATGACGTTCAAACCTTGAATCAATGTCT
TGAACATTTCAAGACGCTTCAATCTTCTTGCTTCGATGATTTCAGTAATGTTCAAAGCTCAGTTCAAGATTATGAGAAGAAAATCGAGGCATGCCGGCAGAAAACAGAGG
AGGCGAGAACGAGCACTGTTTCAGATGATGAAATCGATATTCTCGAAAAGGAGCTCGGAGAGGAACTTGGCAAAGGGAATTTGCTCATGGAGGAAATTAGATAA

mRNA sequence

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Protein sequence

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MADFAGKFNIEELLSYGDDLVALLNDQNDVQTLNQCLEHFKTLQSSCFDDFSNVQSSVQDYEKKIEACRQKTEEARTSTVSDDEIDILEKELGEELGKGNLLMEEIR

Csor.00g199430 (gene) of Silver-seed gourd (wild; sororia) v1 genome