CuGenDBv2

Gene ID	Csor.00g200210
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Cyclin-dependent protein kinase inhibitor SMR4
Genome location	Csor_Chr03:4940103..4940327
RNA-Seq Expression	Csor.00g200210
Synteny	Csor.00g200210
Gene Ontology terms	GO:0006620 - posttranslational protein targeting to endoplasmic reticulum membrane (biological process) GO:0030433 - ubiquitin-dependent ERAD pathway (biological process) GO:0032875 - regulation of DNA endoreduplication (biological process) GO:0016020 - membrane (cellular component) GO:0072380 - TRC complex (cellular component) GO:0060090 - molecular adaptor activity (molecular function)
InterPro domains	IPR040389 - Cyclin-dependent protein kinase inhibitor SMR

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0032664.1 cyclin-dependent protein kinase inhibitor SMR2 [Cucumis melo var. makuwa]

1.79e-33

77.03

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Query:  MEKTDARSATNGNECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRWEACV
        MEKTD     NG+ECLTP++ A RIP  SKCPPPPKKKAVTGRK  PPTSGYF PPDLDALFS+PPSSRWEAC 
Subjt:  MEKTDARSATNGNECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRWEACV

KAF4373031.1 hypothetical protein F8388_011058 [Cannabis sativa]

1.45e-18

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Query:  MEKTDARSATNGNECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRWEACV
        ME+ +      G +C TP+    RIP    CPPPPKKK+++G K+ PP +GYFHPPDLD+LF +P  SR +AC 
Subjt:  MEKTDARSATNGNECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRWEACV

KAG6603646.1 Cyclin-dependent protein kinase inhibitor SMR4, partial [Cucurbita argyrosperma subsp. sororia]

1.99e-50

100

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Query:  MEKTDARSATNGNECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRWEACV
        MEKTDARSATNGNECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRWEACV
Subjt:  MEKTDARSATNGNECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRWEACV

KAG7012399.1 Cyclin-dependent protein kinase inhibitor SMR4, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.33e-27

83.33

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Query:  NECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRWEA
        NEC+TPRN AFRIPAASKCPP  ++KAV   KQP PTSGYFHPPDLDALFSMPPSSRWEA
Subjt:  NECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRWEA

KGN54563.2 hypothetical protein Csa_017876 [Cucumis sativus]

8.54e-31

73.61

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Query:  MEKTDARSATNGNECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRWEA
        MEKTD     NG+ECLTP++CA RIP   KCPPPPKKK+ TGRK  PPT GYF PPDLD LFSMPPSSRWEA
Subjt:  MEKTDARSATNGNECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRWEA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KXI9 Uncharacterized protein

1.01e-32

72.97

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Query:  MEKTDARSATNGNECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRWEACV
        MEKTD     NG+ECLTP++CA RIP   KCPPPPKKK+ TGRK  PPT GYF PPDLD LFSMPPSSRWEAC 
Subjt:  MEKTDARSATNGNECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRWEACV

A0A5A7SNA9 Cyclin-dependent protein kinase inhibitor SMR2

8.65e-34

77.03

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Query:  MEKTDARSATNGNECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRWEACV
        MEKTD     NG+ECLTP++ A RIP  SKCPPPPKKKAVTGRK  PPTSGYF PPDLDALFS+PPSSRWEAC 
Subjt:  MEKTDARSATNGNECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRWEACV

A0A7J6H051 Uncharacterized protein

7.01e-19

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Query:  MEKTDARSATNGNECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRWEACV
        ME+ +      G +C TP+    RIP    CPPPPKKK+++G K+ PP +GYFHPPDLD+LF +P  SR +AC 
Subjt:  MEKTDARSATNGNECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRWEACV

B9SZZ7 Uncharacterized protein

1.19e-17

51.43

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Query:  MEKTDARSATNGNECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRW
        +E+    S   G EC TPR+   RIP    CPPPP+KK+ TG K+ PP +GYF PPDLD L S+PP   W
Subjt:  MEKTDARSATNGNECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRW

W9RWM9 Uncharacterized protein

1.93e-17

56.25

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Query:  NGNECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRWEACV
        +  +C TP+    RIP A  CPPPP+KK+V G K+PPP +GYF PPDLD+LF MP  SR +AC 
Subjt:  NGNECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRWEACV

SwissProt top hits

e value

%identity

Alignment

Q1JPP8 Cyclin-dependent protein kinase inhibitor SMR4

1.8e-12

49.32

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Query:  MEKTDARSATNGNECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRWEAC
        ME  + ++      C TPR+  +RIP AS CPPPP+KK +  RK+ PP +GYF PPDL+ LF   P  R EAC
Subjt:  MEKTDARSATNGNECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRWEAC

Q9LNX4 Cyclin-dependent protein kinase inhibitor SMR5

2.6e-06

46.55

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Query:  CLTPRNCAFRIPAASKCPPPPKKKAVT---GRKQPPPTSGYFHPPDLDALFSMPPSSR
        C TP     RIPA   CPPP ++K      G+K+ PP  GYF PPDLD  FS+  +S+
Subjt:  CLTPRNCAFRIPAASKCPPPPKKKAVT---GRKQPPPTSGYFHPPDLDALFSMPPSSR

Arabidopsis top hits

e value

%identity

Alignment

AT5G02220.1 unknown protein

1.3e-13

49.32

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Query:  MEKTDARSATNGNECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRWEAC
        ME  + ++      C TPR+  +RIP AS CPPPP+KK +  RK+ PP +GYF PPDL+ LF   P  R EAC
Subjt:  MEKTDARSATNGNECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRWEAC

Sequences

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CDS sequence

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ATGGAGAAGACCGATGCGAGATCGGCTACGAACGGCAACGAATGTTTAACGCCGAGGAACTGCGCTTTTAGAATTCCGGCGGCATCCAAATGCCCGCCACCGCCGAAGAA
GAAAGCGGTCACTGGCCGGAAGCAGCCTCCACCGACGAGTGGTTATTTCCACCCTCCCGATCTCGATGCTTTGTTTTCCATGCCGCCTTCATCACGATGGGAAGCTTGTG
TTTAG

mRNA sequence

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Protein sequence

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MEKTDARSATNGNECLTPRNCAFRIPAASKCPPPPKKKAVTGRKQPPPTSGYFHPPDLDALFSMPPSSRWEACV

Csor.00g200210 (gene) of Silver-seed gourd (wild; sororia) v1 genome