CuGenDBv2

Gene ID	Csor.00g200650
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-D-valine synthase
Genome location	Csor_Chr03:5149545..5151877
RNA-Seq Expression	Csor.00g200650
Synteny	Csor.00g200650
Gene Ontology terms	GO:0003676 - nucleic acid binding (molecular function)
InterPro domains	IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily IPR035979 - RNA-binding domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6603690.1 hypothetical protein SDJN03_04299, partial [Cucurbita argyrosperma subsp. sororia]

1.97e-120

100

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Query:  MTNLNLLRLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNAFRVIGRRGRMYRLERADRSQWDLLSPYNGKTILL
        MTNLNLLRLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNAFRVIGRRGRMYRLERADRSQWDLLSPYNGKTILL
Subjt:  MTNLNLLRLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNAFRVIGRRGRMYRLERADRSQWDLLSPYNGKTILL

Query:  QGIPRNAALDDVERFLSGCDYDATSINMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
        QGIPRNAALDDVERFLSGCDYDATSINMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
Subjt:  QGIPRNAALDDVERFLSGCDYDATSINMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ

KAG7033867.1 hypothetical protein SDJN02_03592, partial [Cucurbita argyrosperma subsp. argyrosperma]

6.99e-115

100

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Query:  LVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNAFRVIGRRGRMYRLERADRSQWDLLSPYNGKTILLQGIPRNAA
        LVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNAFRVIGRRGRMYRLERADRSQWDLLSPYNGKTILLQGIPRNAA
Subjt:  LVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNAFRVIGRRGRMYRLERADRSQWDLLSPYNGKTILLQGIPRNAA

Query:  LDDVERFLSGCDYDATSINMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
        LDDVERFLSGCDYDATSINMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
Subjt:  LDDVERFLSGCDYDATSINMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ

XP_022949855.1 uncharacterized protein LOC111453126 [Cucurbita moschata]

5.28e-112

98.8

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Query:  LVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNAFRVIGRRGRMYRLERADRSQWDLLSPYNGKTILLQGIPRNAA
        LVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPS KAYDNAFRVIGRRGRMYRLERADRSQWDLLSPYNGK ILLQGIPRNAA
Subjt:  LVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNAFRVIGRRGRMYRLERADRSQWDLLSPYNGKTILLQGIPRNAA

Query:  LDDVERFLSGCDYDATSINMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
        LDDVERFLSGCDYDATSINMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
Subjt:  LDDVERFLSGCDYDATSINMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ

XP_022977775.1 uncharacterized protein LOC111477976 [Cucurbita maxima]

5.28e-112

97.59

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Query:  LVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNAFRVIGRRGRMYRLERADRSQWDLLSPYNGKTILLQGIPRNAA
        LVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRK+YDNAFRVIGRRGR+YRLERADRSQWDLLSPYNGKT+LLQGIPRNAA
Subjt:  LVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNAFRVIGRRGRMYRLERADRSQWDLLSPYNGKTILLQGIPRNAA

Query:  LDDVERFLSGCDYDATSINMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
        LDDVERFLSGCDYDAT INMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
Subjt:  LDDVERFLSGCDYDATSINMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ

XP_023544682.1 uncharacterized protein LOC111804194 [Cucurbita pepo subsp. pepo]

5.52e-114

99.4

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Query:  LVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNAFRVIGRRGRMYRLERADRSQWDLLSPYNGKTILLQGIPRNAA
        LVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNAFRVIGRRGRMYRLERADRSQWDLLSPYNGKT+LLQGIPRNAA
Subjt:  LVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNAFRVIGRRGRMYRLERADRSQWDLLSPYNGKTILLQGIPRNAA

Query:  LDDVERFLSGCDYDATSINMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
        LDDVERFLSGCDYDATSINMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
Subjt:  LDDVERFLSGCDYDATSINMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CQY2 uncharacterized protein LOC111013764

3.28e-106

90.96

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Query:  LVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNAFRVIGRRGRMYRLERADRSQWDLLSPYNGKTILLQGIPRNAA
        LVYGKLYGITRN LKTDIVNLLEGCNL LDDVKV+YNRSFTPTSMMMQFPSR+AYDNA RVIGR+GR+YRLERADRSQWDLLSPYNGKT+LLQG+PRNA 
Subjt:  LVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNAFRVIGRRGRMYRLERADRSQWDLLSPYNGKTILLQGIPRNAA

Query:  LDDVERFLSGCDYDATSINMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
         +DVERFLSGC+YDATSINMFFRAS+PEP+RMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
Subjt:  LDDVERFLSGCDYDATSINMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ

A0A6J1GDZ1 uncharacterized protein LOC111453126

2.56e-112

98.8

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Query:  LVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNAFRVIGRRGRMYRLERADRSQWDLLSPYNGKTILLQGIPRNAA
        LVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPS KAYDNAFRVIGRRGRMYRLERADRSQWDLLSPYNGK ILLQGIPRNAA
Subjt:  LVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNAFRVIGRRGRMYRLERADRSQWDLLSPYNGKTILLQGIPRNAA

Query:  LDDVERFLSGCDYDATSINMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
        LDDVERFLSGCDYDATSINMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
Subjt:  LDDVERFLSGCDYDATSINMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ

A0A6J1HGY5 uncharacterized protein LOC111463377

5.24e-105

90.36

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Query:  LVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNAFRVIGRRGRMYRLERADRSQWDLLSPYNGKTILLQGIPRNAA
        LVYGKL GITRN LKTDIVNLLEGCNL+LDDVKVEYNRSFTPTSMMMQFPSR+AYDNAFRVIGR+GR+YRLERADRSQWD+LSPY+GKT+LLQGIPRNA 
Subjt:  LVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNAFRVIGRRGRMYRLERADRSQWDLLSPYNGKTILLQGIPRNAA

Query:  LDDVERFLSGCDYDATSINMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
        ++DVERFL GCDYDATSINMFFRAS PEP+R+ATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
Subjt:  LDDVERFLSGCDYDATSINMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ

A0A6J1I6U3 uncharacterized protein LOC111471264

1.35e-107

92.17

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Query:  LVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNAFRVIGRRGRMYRLERADRSQWDLLSPYNGKTILLQGIPRNAA
        LVYGKLYGITRN LKTDIVNLLEGCNL+LDDVKVEYNRSFTPTSMMMQFPSR+AYDNAFRVIGR+GR+YRLERADRSQWD+LSPYNGKT+LLQGIPRNA 
Subjt:  LVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNAFRVIGRRGRMYRLERADRSQWDLLSPYNGKTILLQGIPRNAA

Query:  LDDVERFLSGCDYDATSINMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
        ++DVERFL GCDYDATSINMFFRAS PEP+RMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
Subjt:  LDDVERFLSGCDYDATSINMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ

A0A6J1INA4 uncharacterized protein LOC111477976

2.56e-112

97.59

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Query:  LVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNAFRVIGRRGRMYRLERADRSQWDLLSPYNGKTILLQGIPRNAA
        LVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRK+YDNAFRVIGRRGR+YRLERADRSQWDLLSPYNGKT+LLQGIPRNAA
Subjt:  LVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNAFRVIGRRGRMYRLERADRSQWDLLSPYNGKTILLQGIPRNAA

Query:  LDDVERFLSGCDYDATSINMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
        LDDVERFLSGCDYDAT INMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
Subjt:  LDDVERFLSGCDYDATSINMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G02740.1 Ribosomal protein S24e family protein

3.7e-43

50.6

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Query:  YGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNR--SFTPTSMMMQFPSRKAYDNAFRVIGRRGRMYRLERADRSQWDLLSPYNGKTILLQGIPRNAA
        YGK  G +++ LKTDI+N+LEGC+L+ DD+K  Y R  + TP ++ +QFPS  AYD A R I ++G++YRLE+A R+QWD + PY GK + L GIP NA 
Subjt:  YGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNR--SFTPTSMMMQFPSRKAYDNAFRVIGRRGRMYRLERADRSQWDLLSPYNGKTILLQGIPRNAA

Query:  LDDVERFLSGCDYDATSINMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ
         DD++RFLSGC Y   SI       +    R+A V F S TQAM+A++TKNR F LN +I ++VLQ
Subjt:  LDDVERFLSGCDYDATSINMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ

AT5G02740.2 Ribosomal protein S24e family protein

2.3e-32

53.39

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Query:  YGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNR--SFTPTSMMMQFPSRKAYDNAFRVIGRRGRMYRLERADRSQWDLLSPYNGKTILLQGIPRNAA
        YGK  G +++ LKTDI+N+LEGC+L+ DD+K  Y R  + TP ++ +QFPS  AYD A R I ++G++YRLE+A R+QWD + PY GK + L GIP NA 
Subjt:  YGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNR--SFTPTSMMMQFPSRKAYDNAFRVIGRRGRMYRLERADRSQWDLLSPYNGKTILLQGIPRNAA

Query:  LDDVERFLSGCDYDATSI
         DD++RFLSGC Y   SI
Subjt:  LDDVERFLSGCDYDATSI

Sequences

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CDS sequence

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ATGACAAACCTCAATCTGCTCCGTTTGGTGTATGGAAAATTGTATGGTATCACAAGGAATGTTCTAAAGACAGACATTGTCAATTTGCTTGAAGGATGTAATTTG
AGTTTGGATGATGTCAAAGTTGAATACAACCGGAGTTTCACGCCAACCTCTATGATGATGCAATTCCCCTCCCGGAAGGCCTATGATAATGCTTTTCGAGTGATT
GGAAGAAGAGGTCGCATGTACAGATTGGAGCGGGCTGATCGTTCTCAGTGGGACCTTCTTTCACCTTACAATGGAAAAACTATCCTTCTGCAAGGAATACCTCGA
AATGCAGCGCTAGATGACGTGGAGCGCTTCTTATCTGGCTGTGACTATGATGCAACCTCAATCAATATGTTTTTCAGGGCATCCATTCCAGAGCCCATCAGAATG
GCAACAGTGCTGTTCCCTTCACCAACACAAGCAATGCATGCATTTCTTACTAAGAACAGAGGCTTTTGTCTGAACAACCAAATTTTGATGCGGGTTCTCCAATAA

mRNA sequence

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Protein sequence

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MTNLNLLRLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNAFRVIGRRGRMYRLERADRSQWDLLSPYNGKTILLQGIPR
NAALDDVERFLSGCDYDATSINMFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ

Csor.00g200650 (gene) of Silver-seed gourd (wild; sororia) v1 genome