; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Csor.00g201530 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g201530
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Descriptionpeptidyl-tRNA hydrolase, chloroplastic-like isoform X1
Genome locationCsor_Chr18:3066..3941
RNA-Seq ExpressionCsor.00g201530
SyntenyCsor.00g201530
Gene Ontology termsGO:0004045 - aminoacyl-tRNA hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572894.1 hypothetical protein SDJN03_26781, partial [Cucurbita argyrosperma subsp. sororia]2.27e-79100Show/hide
Query:  MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSFSILKSPKFAYLFVDDFFHYCVHVHFLTSGPRSARFGGEQARAAAQAMADRWPWESREEVGFEMVDA
        MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSFSILKSPKFAYLFVDDFFHYCVHVHFLTSGPRSARFGGEQARAAAQAMADRWPWESREEVGFEMVDA
Subjt:  MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSFSILKSPKFAYLFVDDFFHYCVHVHFLTSGPRSARFGGEQARAAAQAMADRWPWESREEVGFEMVDA

Query:  VAVVEGISMSSASFKALIG
        VAVVEGISMSSASFKALIG
Subjt:  VAVVEGISMSSASFKALIG

KAG6572895.1 Peptidyl-tRNA hydrolase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]8.79e-2552.27Show/hide
Query:  MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSFSILKSPKFAYLFVDDFFHYCVHVHFLTSGPRSARFGGEQARAAAQAMADRWPW-------------
        MNIAASLSSLAALRLPVCLHCFRTFRTPISFPS S+  +P   ++F        +     TS P +      +    A       PW             
Subjt:  MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSFSILKSPKFAYLFVDDFFHYCVHVHFLTSGPRSARFGGEQARAAAQAMADRWPW-------------

Query:  ESREEVGFEMVDAVAVVEGISMSSASFKALIG
         +R  V FEMVDAVAVVEGISMSSASFKALIG
Subjt:  ESREEVGFEMVDAVAVVEGISMSSASFKALIG

XP_022954858.1 peptidyl-tRNA hydrolase, chloroplastic-like isoform X1 [Cucurbita moschata]1.00e-2453.03Show/hide
Query:  MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSFSILKSPKFAYLFVDDFFHYCVHVHFLTSGPRSARFGGEQARAAAQAMADRWPW-------------
        MNIAASLSSLAALRLPVCLHCFRTFRTPISFPS S+  +P   ++F      +   +   TS P +      +    A       PW             
Subjt:  MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSFSILKSPKFAYLFVDDFFHYCVHVHFLTSGPRSARFGGEQARAAAQAMADRWPW-------------

Query:  ESREEVGFEMVDAVAVVEGISMSSASFKALIG
         +R  VGFEMVDAVAVVEGISMSSASFKALIG
Subjt:  ESREEVGFEMVDAVAVVEGISMSSASFKALIG

XP_022954859.1 peptidyl-tRNA hydrolase, chloroplastic-like isoform X2 [Cucurbita moschata]3.95e-2553.03Show/hide
Query:  MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSFSILKSPKFAYLFVDDFFHYCVHVHFLTSGPRSARFGGEQARAAAQAMADRWPW-------------
        MNIAASLSSLAALRLPVCLHCFRTFRTPISFPS S+  +P   ++F      +   +   TS P +      +    A       PW             
Subjt:  MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSFSILKSPKFAYLFVDDFFHYCVHVHFLTSGPRSARFGGEQARAAAQAMADRWPW-------------

Query:  ESREEVGFEMVDAVAVVEGISMSSASFKALIG
         +R  VGFEMVDAVAVVEGISMSSASFKALIG
Subjt:  ESREEVGFEMVDAVAVVEGISMSSASFKALIG

XP_022955054.1 peptidyl-tRNA hydrolase, chloroplastic-like isoform X1 [Cucurbita moschata]2.18e-2552.27Show/hide
Query:  MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSFSILKSPKFAYLFVDDFFHYCVHVHFLTSGPRSARFGGEQARAAAQAMADRWPW-------------
        MNIAASLSSLAALRLPVCLHCFRTFRTPISFPS S+  +P   ++F        +     TS P +      +    A       PW             
Subjt:  MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSFSILKSPKFAYLFVDDFFHYCVHVHFLTSGPRSARFGGEQARAAAQAMADRWPW-------------

Query:  ESREEVGFEMVDAVAVVEGISMSSASFKALIG
         +R  VGFEMVDAVAVVEGISMSS SFKALIG
Subjt:  ESREEVGFEMVDAVAVVEGISMSSASFKALIG

TrEMBL top hitse value%identityAlignment
A0A6J1GS97 peptidyl-tRNA hydrolase, chloroplastic-like isoform X14.85e-2553.03Show/hide
Query:  MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSFSILKSPKFAYLFVDDFFHYCVHVHFLTSGPRSARFGGEQARAAAQAMADRWPW-------------
        MNIAASLSSLAALRLPVCLHCFRTFRTPISFPS S+  +P   ++F      +   +   TS P +      +    A       PW             
Subjt:  MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSFSILKSPKFAYLFVDDFFHYCVHVHFLTSGPRSARFGGEQARAAAQAMADRWPW-------------

Query:  ESREEVGFEMVDAVAVVEGISMSSASFKALIG
         +R  VGFEMVDAVAVVEGISMSSASFKALIG
Subjt:  ESREEVGFEMVDAVAVVEGISMSSASFKALIG

A0A6J1GTK7 peptidyl-tRNA hydrolase, chloroplastic-like isoform X21.91e-2553.03Show/hide
Query:  MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSFSILKSPKFAYLFVDDFFHYCVHVHFLTSGPRSARFGGEQARAAAQAMADRWPW-------------
        MNIAASLSSLAALRLPVCLHCFRTFRTPISFPS S+  +P   ++F      +   +   TS P +      +    A       PW             
Subjt:  MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSFSILKSPKFAYLFVDDFFHYCVHVHFLTSGPRSARFGGEQARAAAQAMADRWPW-------------

Query:  ESREEVGFEMVDAVAVVEGISMSSASFKALIG
         +R  VGFEMVDAVAVVEGISMSSASFKALIG
Subjt:  ESREEVGFEMVDAVAVVEGISMSSASFKALIG

A0A6J1GUU4 peptidyl-tRNA hydrolase, chloroplastic-like isoform X11.05e-2552.27Show/hide
Query:  MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSFSILKSPKFAYLFVDDFFHYCVHVHFLTSGPRSARFGGEQARAAAQAMADRWPW-------------
        MNIAASLSSLAALRLPVCLHCFRTFRTPISFPS S+  +P   ++F        +     TS P +      +    A       PW             
Subjt:  MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSFSILKSPKFAYLFVDDFFHYCVHVHFLTSGPRSARFGGEQARAAAQAMADRWPW-------------

Query:  ESREEVGFEMVDAVAVVEGISMSSASFKALIG
         +R  VGFEMVDAVAVVEGISMSS SFKALIG
Subjt:  ESREEVGFEMVDAVAVVEGISMSSASFKALIG

A0A6J1JZW9 peptidyl-tRNA hydrolase, chloroplastic-like isoform X13.78e-2450.38Show/hide
Query:  MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSFSILKSPKFAYLFVDDFFHYCVHVHFLTSGPRSA-RFGGEQARAAAQAMADRWPW------------
        MNIAASLSSLAALRLP+CLHCF TFRTPISFPS S+  +P   ++F        +     TS P +  +   E+ + A        PW            
Subjt:  MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSFSILKSPKFAYLFVDDFFHYCVHVHFLTSGPRSA-RFGGEQARAAAQAMADRWPW------------

Query:  -ESREEVGFEMVDAVAVVEGISMSSASFKALIG
          +R  VGFEM+DAVA VEGISMSSASFKALIG
Subjt:  -ESREEVGFEMVDAVAVVEGISMSSASFKALIG

A0A6J1K317 peptidyl-tRNA hydrolase, chloroplastic isoform X31.52e-2350.38Show/hide
Query:  MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSFSILKSPKFAYLFVDDFFHYCVHVHFLTSGPRSA-RFGGEQARAAAQAMADRWPW------------
        MNIAASLSSLAALRLP+CLHCF TFRTPISFPS S+  +P   ++F        +     TS P +  +   E+ + A        PW            
Subjt:  MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSFSILKSPKFAYLFVDDFFHYCVHVHFLTSGPRSA-RFGGEQARAAAQAMADRWPW------------

Query:  -ESREEVGFEMVDAVAVVEGISMSSASFKALIG
          +R  VGFEM+DAVA VEGISMSSASFKALIG
Subjt:  -ESREEVGFEMVDAVAVVEGISMSSASFKALIG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G18440.1 Peptidyl-tRNA hydrolase family protein5.2e-0464.52Show/hide
Query:  SREEVGFEMVDAVAVVEGISMSSASFKALIG
        +R  VGFEMVDA+A  EGISM++ +FKAL G
Subjt:  SREEVGFEMVDAVAVVEGISMSSASFKALIG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATATTGCTGCTTCTCTATCTTCACTCGCCGCCCTGCGCCTTCCTGTTTGTCTCCATTGTTTCCGAACCTTCAGAACACCCATTTCCTTCCCTTCCTTCTCTATCCT
TAAATCCCCTAAGTTTGCATATCTTTTCGTCGATGACTTCTTCCATTACTGCGTCCATGTCCACTTCCTCACCTCTGGCCCCCGATCTGCTCGCTTTGGAGGAGAACAAG
CCCGCGCTGCCGCCCAAGCCATGGCTGATCGTTGGCCTTGGGAATCCCGGGAAGAAGTAGGCTTTGAGATGGTGGATGCTGTTGCTGTGGTTGAAGGGATATCCATGAGT
AGTGCTTCCTTCAAAGCTCTGATCGGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATATTGCTGCTTCTCTATCTTCACTCGCCGCCCTGCGCCTTCCTGTTTGTCTCCATTGTTTCCGAACCTTCAGAACACCCATTTCCTTCCCTTCCTTCTCTATCCT
TAAATCCCCTAAGTTTGCATATCTTTTCGTCGATGACTTCTTCCATTACTGCGTCCATGTCCACTTCCTCACCTCTGGCCCCCGATCTGCTCGCTTTGGAGGAGAACAAG
CCCGCGCTGCCGCCCAAGCCATGGCTGATCGTTGGCCTTGGGAATCCCGGGAAGAAGTAGGCTTTGAGATGGTGGATGCTGTTGCTGTGGTTGAAGGGATATCCATGAGT
AGTGCTTCCTTCAAAGCTCTGATCGGGTAA
Protein sequenceShow/hide protein sequence
MNIAASLSSLAALRLPVCLHCFRTFRTPISFPSFSILKSPKFAYLFVDDFFHYCVHVHFLTSGPRSARFGGEQARAAAQAMADRWPWESREEVGFEMVDAVAVVEGISMS
SASFKALIG