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Csor.00g201940 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g201940
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
Genome locationCsor_Chr06:1563721..1563954
RNA-Seq ExpressionCsor.00g201940
SyntenyCsor.00g201940
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044076.1 hypothetical protein E6C27_scaffold236G004240 [Cucumis melo var. makuwa]2.34e-2672.15Show/hide
Query:  MSQRSGRHQRRPSQGVFMTADYLSEPPPPT--GPPLPVESVDPQSSFLSRPPPQSRYADPPAARPPAPAVSNEAPNPAS
        MSQR GRHQRRPSQGVFM ADYLSEPPPP   GP   VES  P S+ L+RPP QSR ADP A RPPAPA +N+A NPAS
Subjt:  MSQRSGRHQRRPSQGVFMTADYLSEPPPPT--GPPLPVESVDPQSSFLSRPPPQSRYADPPAARPPAPAVSNEAPNPAS

KAG6580559.1 hypothetical protein SDJN03_20561, partial [Cucurbita argyrosperma subsp. sororia]9.03e-2672Show/hide
Query:  MSQRSGRHQRRPSQGVFMTADYLSEPPPPTGPPLPVESVDPQSSFLSRPPPQSRYADPPAARPPAPAVSNEAPNP
        MSQR GRHQRRPSQ VF+ ADYLSEPP  TGP   VE   P S+ L RPP QSR ADP A RPPAPA SNEAPNP
Subjt:  MSQRSGRHQRRPSQGVFMTADYLSEPPPPTGPPLPVESVDPQSSFLSRPPPQSRYADPPAARPPAPAVSNEAPNP

KAG6596419.1 hypothetical protein SDJN03_09599, partial [Cucurbita argyrosperma subsp. sororia]1.61e-46100Show/hide
Query:  MSQRSGRHQRRPSQGVFMTADYLSEPPPPTGPPLPVESVDPQSSFLSRPPPQSRYADPPAARPPAPAVSNEAPNPAS
        MSQRSGRHQRRPSQGVFMTADYLSEPPPPTGPPLPVESVDPQSSFLSRPPPQSRYADPPAARPPAPAVSNEAPNPAS
Subjt:  MSQRSGRHQRRPSQGVFMTADYLSEPPPPTGPPLPVESVDPQSSFLSRPPPQSRYADPPAARPPAPAVSNEAPNPAS

KGN58888.1 hypothetical protein Csa_002334 [Cucumis sativus]9.40e-2470Show/hide
Query:  MSQRSGRHQRRPSQGVFMTADYLSEPPPPTGPPLPVESVDPQSS-FLSRPPPQSRYADPPAARPPAP--AVSNEAPNPAS
        MSQR  RHQRRPSQGVFM ADYLS+PPPP GP   VES  P SS  L+RP  QSR ADP AARPPAP    +N+APNPAS
Subjt:  MSQRSGRHQRRPSQGVFMTADYLSEPPPPTGPPLPVESVDPQSS-FLSRPPPQSRYADPPAARPPAP--AVSNEAPNPAS

PIN11955.1 hypothetical protein CDL12_15420 [Handroanthus impetiginosus]4.04e-0549.02Show/hide
Query:  MSQRSGRHQRRPSQGVFMTADYLSEPPPPTGPPLPVESVDPQSSFLSRPPP
        MSQR+ RHQRRPSQGVF+  D LS+PP        +E + P  +    PPP
Subjt:  MSQRSGRHQRRPSQGVFMTADYLSEPPPPTGPPLPVESVDPQSSFLSRPPP

TrEMBL top hitse value%identityAlignment
A0A0A0LAM0 Uncharacterized protein4.55e-2470Show/hide
Query:  MSQRSGRHQRRPSQGVFMTADYLSEPPPPTGPPLPVESVDPQSS-FLSRPPPQSRYADPPAARPPAP--AVSNEAPNPAS
        MSQR  RHQRRPSQGVFM ADYLS+PPPP GP   VES  P SS  L+RP  QSR ADP AARPPAP    +N+APNPAS
Subjt:  MSQRSGRHQRRPSQGVFMTADYLSEPPPPTGPPLPVESVDPQSS-FLSRPPPQSRYADPPAARPPAP--AVSNEAPNPAS

A0A218VWA7 Uncharacterized protein1.27e-0443.9Show/hide
Query:  MSQRSGRHQRRPSQGVFMTADYLSE----------PPPPTGPPLPVESVDPQSSFLSRPPPQSRYADPPAARPPAPAVSNEA
        MSQR GRHQRRPSQ VF + D+ +E          P PPT PP+P     P +   +  PP      PPAA  PAPA +  A
Subjt:  MSQRSGRHQRRPSQGVFMTADYLSE----------PPPPTGPPLPVESVDPQSSFLSRPPPQSRYADPPAARPPAPAVSNEA

A0A2G9H136 Uncharacterized protein5.69e-0550Show/hide
Query:  MSQRSGRHQRRPSQGVFMTADYLSEPPPPTGPPLPVESVDPQSSFLSRPPPQSR
        MSQR+ RHQRRPSQGVF+  D LS P       LP +   PQ++     PPQ R
Subjt:  MSQRSGRHQRRPSQGVFMTADYLSEPPPPTGPPLPVESVDPQSSFLSRPPPQSR

A0A2G9H363 Uncharacterized protein1.96e-0549.02Show/hide
Query:  MSQRSGRHQRRPSQGVFMTADYLSEPPPPTGPPLPVESVDPQSSFLSRPPP
        MSQR+ RHQRRPSQGVF+  D LS+PP        +E + P  +    PPP
Subjt:  MSQRSGRHQRRPSQGVFMTADYLSEPPPPTGPPLPVESVDPQSSFLSRPPP

A0A5A7TPQ1 Uncharacterized protein1.14e-2672.15Show/hide
Query:  MSQRSGRHQRRPSQGVFMTADYLSEPPPPT--GPPLPVESVDPQSSFLSRPPPQSRYADPPAARPPAPAVSNEAPNPAS
        MSQR GRHQRRPSQGVFM ADYLSEPPPP   GP   VES  P S+ L+RPP QSR ADP A RPPAPA +N+A NPAS
Subjt:  MSQRSGRHQRRPSQGVFMTADYLSEPPPPT--GPPLPVESVDPQSSFLSRPPPQSRYADPPAARPPAPAVSNEAPNPAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGCAGCGATCGGGCAGGCACCAGAGGAGGCCTTCGCAGGGCGTTTTCATGACCGCCGATTACCTTTCCGAACCACCTCCGCCGACCGGACCGCCCTTGCCGGTTGA
ATCTGTTGATCCACAATCGAGTTTCCTGTCTCGGCCGCCGCCGCAGAGTCGCTACGCTGATCCGCCGGCAGCAAGGCCTCCTGCTCCAGCGGTGTCGAATGAAGCTCCAA
ATCCGGCGAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGCAGCGATCGGGCAGGCACCAGAGGAGGCCTTCGCAGGGCGTTTTCATGACCGCCGATTACCTTTCCGAACCACCTCCGCCGACCGGACCGCCCTTGCCGGTTGA
ATCTGTTGATCCACAATCGAGTTTCCTGTCTCGGCCGCCGCCGCAGAGTCGCTACGCTGATCCGCCGGCAGCAAGGCCTCCTGCTCCAGCGGTGTCGAATGAAGCTCCAA
ATCCGGCGAGCTAG
Protein sequenceShow/hide protein sequence
MSQRSGRHQRRPSQGVFMTADYLSEPPPPTGPPLPVESVDPQSSFLSRPPPQSRYADPPAARPPAPAVSNEAPNPAS