; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Csor.00g203280 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g203280
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationCsor_Chr01:4519098..4520003
RNA-Seq ExpressionCsor.00g203280
SyntenyCsor.00g203280
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0009644 - response to high light intensity (biological process)
GO:0009645 - response to low light intensity stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0016168 - chlorophyll binding (molecular function)
GO:0019904 - protein domain specific binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607455.1 Chlorophyll a-b binding protein P4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.26e-181100Show/hide
Query:  MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR
        MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR
Subjt:  MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTSYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
        WAMLGVAGMLLPEVFTSYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
Subjt:  WAMLGVAGMLLPEVFTSYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA

Query:  KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHIYQIHGTTLLSKR
        KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHIYQIHGTTLLSKR
Subjt:  KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHIYQIHGTTLLSKR

KAG7037112.1 Chlorophyll a-b binding protein P4, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]5.40e-17299.18Show/hide
Query:  IQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLG
        I+ASAAVF PSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLG
Subjt:  IQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLG

Query:  VAGMLLPEVFTSYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEI
        VAGMLLPEVFTSYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEI
Subjt:  VAGMLLPEVFTSYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEI

Query:  ANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHIYQIHGTTLLSKR
        ANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHIYQIHGTTLLSKR
Subjt:  ANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHIYQIHGTTLLSKR

XP_022949090.1 chlorophyll a-b binding protein P4, chloroplastic-like [Cucurbita moschata]8.17e-17199.58Show/hide
Query:  MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR
        MSIVMIQASAAVFRPSASRSRFL GSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR
Subjt:  MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTSYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
        WAMLGVAGMLLPEVFTSYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
Subjt:  WAMLGVAGMLLPEVFTSYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA

Query:  KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI
        KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI
Subjt:  KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI

XP_022998805.1 chlorophyll a-b binding protein P4, chloroplastic-like [Cucurbita maxima]2.34e-17099.58Show/hide
Query:  MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR
        MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR
Subjt:  MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTSYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
        WAMLGVAGMLLPEVFTS GIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
Subjt:  WAMLGVAGMLLPEVFTSYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA

Query:  KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI
        KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI
Subjt:  KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI

XP_023524863.1 chlorophyll a-b binding protein P4, chloroplastic-like [Cucurbita pepo subsp. pepo]3.33e-17099.16Show/hide
Query:  MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR
        MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTS VPSSFKVEAKKGEWLPGLPSP YLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR
Subjt:  MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTSYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
        WAMLGVAGMLLPEVFTSYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
Subjt:  WAMLGVAGMLLPEVFTSYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA

Query:  KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI
        KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI
Subjt:  KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI

TrEMBL top hitse value%identityAlignment
A0A0A0LTE5 Chlorophyll a-b binding protein, chloroplastic3.76e-16292.41Show/hide
Query:  MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR
        M+ V+ QASA VFRP ASRSRFLSGSSGKFNRALSVKPTTS +P++FKVEAKKGEWLPGLPSP YLDGSLPGDNGFDPLGLAEDPENLRWY QAELVNGR
Subjt:  MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTSYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
        WAMLGVAGM+LPEV T+YGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
Subjt:  WAMLGVAGMLLPEVFTSYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA

Query:  KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI
        +EKEIANGRLAMLAFLGFI+QHNVTGKGPFDNF+QHI
Subjt:  KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI

A0A2C9UJS9 Chlorophyll a-b binding protein, chloroplastic4.62e-15287.34Show/hide
Query:  MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR
        M+ V  QASAAVFRP ASRSRFL+GSSGK NR +S KP  S   +SFKVEAKKGEWLPGLPSPAYL+GSLPGDNGFDPLGLAEDPENL+W++QAELVNGR
Subjt:  MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTSYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
        WAMLGVAGMLLPEVFT  GIINVP+WYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN+VGYPGGIFNPLNF PTLEA
Subjt:  WAMLGVAGMLLPEVFTSYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA

Query:  KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI
        KEKE+ANGRLAMLAFLGF++QHNVTGKGPFDN LQH+
Subjt:  KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI

A0A6J1C5V9 Chlorophyll a-b binding protein, chloroplastic2.25e-16194.09Show/hide
Query:  MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR
        M+  M QASAAVFRP ASRSRFLSGSSGKFNRALSVKPT S +P  FKVEAKKGEWLPGLPSPAYLDGSL GDNGFDPLGLAEDPENLRWYVQAELVNGR
Subjt:  MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTSYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
        WAMLGVAGMLLPEVFTS GIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFK YSLPPNDVGYPGGIFNPLNFEPTLEA
Subjt:  WAMLGVAGMLLPEVFTSYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA

Query:  KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI
        KEKEIANGRLAMLAFLGFI+QHNVTGKGPFDNFLQHI
Subjt:  KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI

A0A6J1GBT1 Chlorophyll a-b binding protein, chloroplastic3.96e-17199.58Show/hide
Query:  MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR
        MSIVMIQASAAVFRPSASRSRFL GSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR
Subjt:  MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTSYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
        WAMLGVAGMLLPEVFTSYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
Subjt:  WAMLGVAGMLLPEVFTSYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA

Query:  KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI
        KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI
Subjt:  KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI

A0A6J1KDI3 Chlorophyll a-b binding protein, chloroplastic1.13e-17099.58Show/hide
Query:  MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR
        MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR
Subjt:  MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTSYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
        WAMLGVAGMLLPEVFTS GIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
Subjt:  WAMLGVAGMLLPEVFTSYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA

Query:  KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI
        KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI
Subjt:  KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI

SwissProt top hitse value%identityAlignment
P13869 Chlorophyll a-b binding protein, chloroplastic3.4e-5848.46Show/hide
Query:  ASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFT
        A+++ FL G   + ++ ++   + S+  S+   +  +  W PG   P +LDGSLPGD GFDPLGL  DPE+L+W  QAELV+ RWAMLG AG+ +PE  T
Subjt:  ASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFT

Query:  SYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGI-FNPLNF-----EPTLEAKEKEIANGRL
          G++N P WY AG+ EYF  ++TLFVIE +L  + E RRW DI  PG VN DPIF    L   DVGYPGG+ F+PL +         E + KEI NGRL
Subjt:  SYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGI-FNPLNF-----EPTLEAKEKEIANGRL

Query:  AMLAFLGFIIQHNVTGKGPFDNFLQHI
        AMLA +G   QH  TG GP DN   H+
Subjt:  AMLAFLGFIIQHNVTGKGPFDNFLQHI

P27521 Chlorophyll a-b binding protein 4, chloroplastic1.7e-11080.67Show/hide
Query:  MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPT-TSLVPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNG
        M+ V   ASA++FRP  S+ RFL+GSSG+ NR LS     +S   SSFKVEAKKGEWLPGL SP YL GSL GDNGFDPLGLAEDPENL+W+VQAELVNG
Subjt:  MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPT-TSLVPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNG

Query:  RWAMLGVAGMLLPEVFTSYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLE
        RWAMLGVAGMLLPEVFT  GIINVP+WYDAGK +YFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP  +VGYPGGIFNPLNF PT E
Subjt:  RWAMLGVAGMLLPEVFTSYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLE

Query:  AKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI
        AKEKE+ANGRLAMLAFLGF++QHNVTGKGPF+N LQH+
Subjt:  AKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI

Q36718 Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment)5.0e-7866.67Show/hide
Query:  KFNRALSVKPTTSLVPSSFKVEA---KKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSYGIINVPK
        +F   +   P  S  P S + +     KG WLPGL SPAYLDGSL GDNGFDPL LAEDPE+LRW+VQA++VNGRWAMLGVAGML+PEV T  G++N P+
Subjt:  KFNRALSVKPTTSLVPSSFKVEA---KKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSYGIINVPK

Query:  WYD-AGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIIQHNV
        W    GK  YFASSST   +  +   YVEIRRWQDIKNPGSVNQDPIFK YSLPP++ GYPG +FNPLNF P LE KEKE+ANGRLAMLAFLGF++QHNV
Subjt:  WYD-AGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIIQHNV

Query:  TGKGPFDNFLQHI
         GKGPF+N  QH+
Subjt:  TGKGPFDNFLQHI

Q9SQL2 Chlorophyll a-b binding protein P4, chloroplastic1.9e-11484.39Show/hide
Query:  MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR
        M+ V  QASAA+F P   +SRFL GSSGK NR ++ +P      +SFKVEAKKGEWLPGL SP YL GSLPGDNGFDPLGLAEDPENLRW+VQAELVNGR
Subjt:  MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTSYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA
        WAMLGVAGMLLPEVFTS GIINVPKWY AGK EYFASSSTLFVIEFIL HYVEIRRWQDIKNPGSVNQDPIFKQYSLP  +VGYPGGIFNPLNF PTLEA
Subjt:  WAMLGVAGMLLPEVFTSYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEA

Query:  KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI
        KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDN LQHI
Subjt:  KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI

Q9SYW8 Photosystem I chlorophyll a/b-binding protein 2, chloroplastic7.5e-5848.57Show/hide
Query:  SIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGE---WLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVN
        S+    A AA+  PS     FL G   +  + L+V P  S   +S +  A   +   W PG   P +LDGSLPGD GFDPLGL+ DP++L+W VQAE+V+
Subjt:  SIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGE---WLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVN

Query:  GRWAMLGVAGMLLPEVFTSYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGI-FNPLNF---
         RWAMLG AG+ +PE  T  GI+N P WY AG+ EYF   +TLFV+E IL  + E RRW DI  PGSVN DP+F    L   DVGYPGG+ F+PL +   
Subjt:  GRWAMLGVAGMLLPEVFTSYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGI-FNPLNF---

Query:  --EPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI
              E + KEI NGRLAMLA +G   QH  TG GP DN   H+
Subjt:  --EPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI

Arabidopsis top hitse value%identityAlignment
AT1G19150.1 photosystem I light harvesting complex gene 66.3e-5249.47Show/hide
Query:  WLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIR
        W PG   P +LDGSLPGD GFDPLGL  DP+ L+W+ QAEL++ RWAML V G+++PE     G I    WYDAG  EYFA S+TLFV + +L  + E R
Subjt:  WLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIR

Query:  RWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNF------EPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI
        RW D+  PGSV+ +P +     P  DVGYPGG++           EP +  + KEI NGRLAMLAFLGF  Q   T + P +N + H+
Subjt:  RWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNF------EPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI

AT1G45474.1 photosystem I light harvesting complex gene 52.7e-5048.99Show/hide
Query:  VEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSYGIINVPKWYDAGKAEY-FASSSTLFVIEFI
        V  ++  WLPGL  P YLDG+L GD GFDPLGL EDPE+L+WYVQAELV+ R+AMLGVAG+L  ++  + GI N+P WY+AG  ++ FAS+ TL V++F+
Subjt:  VEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSYGIINVPKWYDAGKAEY-FASSSTLFVIEFI

Query:  LFHYVEIRRWQDIKNPGSVNQDPIF---KQYSLPPNDVGYPGG-IFNPLNFEPTLEA----KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI
        L  + E +R+ D  +PGS  ++  F    + +L   + GYPGG + NPL     ++     K KEI NGRLAM+A LGF +Q +VT  GP DN ++H+
Subjt:  LFHYVEIRRWQDIKNPGSVNQDPIF---KQYSLPPNDVGYPGG-IFNPLNFEPTLEA----KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI

AT1G45474.2 photosystem I light harvesting complex gene 52.7e-5048.99Show/hide
Query:  VEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSYGIINVPKWYDAGKAEY-FASSSTLFVIEFI
        V  ++  WLPGL  P YLDG+L GD GFDPLGL EDPE+L+WYVQAELV+ R+AMLGVAG+L  ++  + GI N+P WY+AG  ++ FAS+ TL V++F+
Subjt:  VEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSYGIINVPKWYDAGKAEY-FASSSTLFVIEFI

Query:  LFHYVEIRRWQDIKNPGSVNQDPIF---KQYSLPPNDVGYPGG-IFNPLNFEPTLEA----KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI
        L  + E +R+ D  +PGS  ++  F    + +L   + GYPGG + NPL     ++     K KEI NGRLAM+A LGF +Q +VT  GP DN ++H+
Subjt:  LFHYVEIRRWQDIKNPGSVNQDPIF---KQYSLPPNDVGYPGG-IFNPLNFEPTLEA----KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI

AT3G47470.1 light-harvesting chlorophyll-protein complex I subunit A41.2e-11180.67Show/hide
Query:  MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPT-TSLVPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNG
        M+ V   ASA++FRP  S+ RFL+GSSG+ NR LS     +S   SSFKVEAKKGEWLPGL SP YL GSL GDNGFDPLGLAEDPENL+W+VQAELVNG
Subjt:  MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPT-TSLVPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNG

Query:  RWAMLGVAGMLLPEVFTSYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLE
        RWAMLGVAGMLLPEVFT  GIINVP+WYDAGK +YFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP  +VGYPGGIFNPLNF PT E
Subjt:  RWAMLGVAGMLLPEVFTSYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLE

Query:  AKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI
        AKEKE+ANGRLAMLAFLGF++QHNVTGKGPF+N LQH+
Subjt:  AKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI

AT3G61470.1 photosystem I light harvesting complex gene 25.3e-5948.57Show/hide
Query:  SIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGE---WLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVN
        S+    A AA+  PS     FL G   +  + L+V P  S   +S +  A   +   W PG   P +LDGSLPGD GFDPLGL+ DP++L+W VQAE+V+
Subjt:  SIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGE---WLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVN

Query:  GRWAMLGVAGMLLPEVFTSYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGI-FNPLNF---
         RWAMLG AG+ +PE  T  GI+N P WY AG+ EYF   +TLFV+E IL  + E RRW DI  PGSVN DP+F    L   DVGYPGG+ F+PL +   
Subjt:  GRWAMLGVAGMLLPEVFTSYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGI-FNPLNF---

Query:  --EPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI
              E + KEI NGRLAMLA +G   QH  TG GP DN   H+
Subjt:  --EPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAATTGTCATGATCCAGGCTTCGGCTGCTGTCTTCCGGCCGAGCGCGTCAAGATCGAGGTTCCTTTCGGGGTCGTCGGGAAAGTTTAACAGAGCTTTGTCT
GTTAAGCCAACAACTTCTCTAGTTCCCAGTTCTTTCAAAGTTGAGGCCAAGAAAGGAGAGTGGCTCCCAGGTTTGCCATCCCCAGCTTACCTTGATGGCAGTCTT
CCAGGTGACAATGGGTTTGATCCTTTGGGACTTGCAGAGGACCCTGAAAACTTGAGGTGGTATGTGCAAGCAGAGCTTGTGAACGGCCGATGGGCAATGCTTGGA
GTTGCAGGTATGCTATTGCCTGAAGTCTTCACAAGTTATGGAATCATCAACGTACCAAAATGGTACGATGCGGGGAAAGCCGAGTATTTTGCATCGTCGTCGACT
CTCTTTGTGATCGAGTTCATTCTGTTCCATTATGTGGAAATCAGAAGATGGCAAGACATAAAGAACCCAGGAAGTGTAAACCAAGATCCCATTTTCAAGCAATAC
AGCTTGCCACCAAATGATGTTGGATATCCAGGGGGAATTTTCAACCCACTCAACTTTGAACCAACTCTTGAAGCCAAGGAAAAGGAGATTGCTAATGGAAGATTG
GCAATGTTGGCATTCTTGGGATTCATCATTCAACACAATGTGACTGGAAAAGGTCCATTTGACAACTTCTTGCAGCATATATATCAGATCCATGGCACAACACTA
TTGTCCAAACGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCAATTGTCATGATCCAGGCTTCGGCTGCTGTCTTCCGGCCGAGCGCGTCAAGATCGAGGTTCCTTTCGGGGTCGTCGGGAAAGTTTAACAGAGCTTTGTCT
GTTAAGCCAACAACTTCTCTAGTTCCCAGTTCTTTCAAAGTTGAGGCCAAGAAAGGAGAGTGGCTCCCAGGTTTGCCATCCCCAGCTTACCTTGATGGCAGTCTT
CCAGGTGACAATGGGTTTGATCCTTTGGGACTTGCAGAGGACCCTGAAAACTTGAGGTGGTATGTGCAAGCAGAGCTTGTGAACGGCCGATGGGCAATGCTTGGA
GTTGCAGGTATGCTATTGCCTGAAGTCTTCACAAGTTATGGAATCATCAACGTACCAAAATGGTACGATGCGGGGAAAGCCGAGTATTTTGCATCGTCGTCGACT
CTCTTTGTGATCGAGTTCATTCTGTTCCATTATGTGGAAATCAGAAGATGGCAAGACATAAAGAACCCAGGAAGTGTAAACCAAGATCCCATTTTCAAGCAATAC
AGCTTGCCACCAAATGATGTTGGATATCCAGGGGGAATTTTCAACCCACTCAACTTTGAACCAACTCTTGAAGCCAAGGAAAAGGAGATTGCTAATGGAAGATTG
GCAATGTTGGCATTCTTGGGATTCATCATTCAACACAATGTGACTGGAAAAGGTCCATTTGACAACTTCTTGCAGCATATATATCAGATCCATGGCACAACACTA
TTGTCCAAACGCTAA
Protein sequenceShow/hide protein sequence
MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLG
VAGMLLPEVFTSYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRL
AMLAFLGFIIQHNVTGKGPFDNFLQHIYQIHGTTLLSKR