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Csor.00g206100 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g206100
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionScarecrow-like protein 5-like isoform X1
Genome locationCsor_Chr06:3421153..3422553
RNA-Seq ExpressionCsor.00g206100
SyntenyCsor.00g206100
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596745.1 hypothetical protein SDJN03_09925, partial [Cucurbita argyrosperma subsp. sororia]5.70e-92100Show/hide
Query:  MEALLPISTSPFRFPPTANASLRPVSSFPLNLRSNSLNKRRRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK
        MEALLPISTSPFRFPPTANASLRPVSSFPLNLRSNSLNKRRRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK
Subjt:  MEALLPISTSPFRFPPTANASLRPVSSFPLNLRSNSLNKRRRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK

Query:  ECGGSGLVLMDKDYFRCPECGGFLPWQSWRRFFSG
        ECGGSGLVLMDKDYFRCPECGGFLPWQSWRRFFSG
Subjt:  ECGGSGLVLMDKDYFRCPECGGFLPWQSWRRFFSG

KAG7028282.1 hypothetical protein SDJN02_09463, partial [Cucurbita argyrosperma subsp. argyrosperma]7.67e-80100Show/hide
Query:  MEALLPISTSPFRFPPTANASLRPVSSFPLNLRSNSLNKRRRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK
        MEALLPISTSPFRFPPTANASLRPVSSFPLNLRSNSLNKRRRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK
Subjt:  MEALLPISTSPFRFPPTANASLRPVSSFPLNLRSNSLNKRRRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK

Query:  ECGGSGLVLMDKDYFRCPECGG
        ECGGSGLVLMDKDYFRCPECGG
Subjt:  ECGGSGLVLMDKDYFRCPECGG

XP_022935718.1 uncharacterized protein LOC111442262 [Cucurbita moschata]9.88e-8696.3Show/hide
Query:  MEALLPISTSPFRFPPTANASLRPVSSFPLNLRSNSLNKRRRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK
        MEALLPISTSPFRFPPTAN S RPVS FPLNLRSNSLNKRRRT TFAAIDGASLAAAAA DPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK
Subjt:  MEALLPISTSPFRFPPTANASLRPVSSFPLNLRSNSLNKRRRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK

Query:  ECGGSGLVLMDKDYFRCPECGGFLPWQSWRRFFSG
        ECGGSGLVLMDKDYFRCPECGGFLPWQSWRRFFSG
Subjt:  ECGGSGLVLMDKDYFRCPECGGFLPWQSWRRFFSG

XP_023005598.1 uncharacterized protein LOC111498537 [Cucurbita maxima]8.13e-8596.3Show/hide
Query:  MEALLPISTSPFRFPPTANASLRPVSSFPLNLRSNSLNKRRRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK
        MEALLPISTSPFRF PTANAS RPVS FPLNLRSNSLNKRRRT TFAAIDGASLAAAAA DPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK
Subjt:  MEALLPISTSPFRFPPTANASLRPVSSFPLNLRSNSLNKRRRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK

Query:  ECGGSGLVLMDKDYFRCPECGGFLPWQSWRRFFSG
        ECGGSGLVLMDKDYFRCPECGGFLPWQSWRRFFSG
Subjt:  ECGGSGLVLMDKDYFRCPECGGFLPWQSWRRFFSG

XP_023540547.1 uncharacterized protein LOC111800877 isoform X1 [Cucurbita pepo subsp. pepo]1.49e-8394.2Show/hide
Query:  MEALLPISTSPFRFPPTANASLRPVSSFPLNLRSNSLNKRRRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK
        MEALLPISTSPFRFPPTAN S RPVS FPLNLRSNSLNKRRRT TFAAIDGASLAAAAA DPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK
Subjt:  MEALLPISTSPFRFPPTANASLRPVSSFPLNLRSNSLNKRRRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK

Query:  ECGGSGLVLMDKDYFRCPECG---GFLPWQSWRRFFSG
        ECGGSGLVLMDKDYFRCPECG   GFLPWQSWRRFFSG
Subjt:  ECGGSGLVLMDKDYFRCPECG---GFLPWQSWRRFFSG

TrEMBL top hitse value%identityAlignment
A0A0A0L7H1 Uncharacterized protein3.81e-5670.8Show/hide
Query:  MEALL--PISTSPFRFPPTANASLRPVSSFPLNLRSNSLNKRRRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKR
        MEAL+  P+ T P         +L P ++FPL  RSNS++ RRRT  FAAIDGASL  A   D TQV+ITWQI VGAIAGVTPFVVAGIEFSKRI  QKR
Subjt:  MEALL--PISTSPFRFPPTANASLRPVSSFPLNLRSNSLNKRRRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKR

Query:  CKECGGSGLVLMDKDYFRCPECGGFLPWQSWRRFFSG
        CKECGGSGLVL D DYFRCPECGGFLPWQSWRRFF G
Subjt:  CKECGGSGLVLMDKDYFRCPECGGFLPWQSWRRFFSG

A0A1S3BLU9 uncharacterized protein LOC1034910511.79e-5383.5Show/hide
Query:  RSNSLNKRRRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLMDKDYFRCPECGGFLPWQSWRRF
        RSNS++ RRRT  FAAIDGAS   + AAD TQVEITWQI VGAIAGVTPFVVAGIEFSKRI+AQKRCKECGGSGLVL D DYFRCP+CGGFLPWQSWRRF
Subjt:  RSNSLNKRRRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLMDKDYFRCPECGGFLPWQSWRRF

Query:  FSG
        F G
Subjt:  FSG

A0A6J1DN65 uncharacterized protein LOC1110221358.55e-4964.44Show/hide
Query:  MEALLPISTSPFRFPPTANASLRPVSSFPLNLRSNSLNKRRRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK
        MEAL PIS S FRF        +P++S P        N+R +T T AAI+ A  A+   ADP+Q++ITWQI VGAIAGVTPFVVAGIEF+KRIVAQ+RC+
Subjt:  MEALLPISTSPFRFPPTANASLRPVSSFPLNLRSNSLNKRRRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK

Query:  ECGGSGLVLMDKDYFRCPECGGFLPWQSWRRFFSG
        ECGGSGLVLM+ DYFRCP+CGGFLPWQSW+RFF G
Subjt:  ECGGSGLVLMDKDYFRCPECGGFLPWQSWRRFFSG

A0A6J1FBA7 uncharacterized protein LOC1114422624.78e-8696.3Show/hide
Query:  MEALLPISTSPFRFPPTANASLRPVSSFPLNLRSNSLNKRRRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK
        MEALLPISTSPFRFPPTAN S RPVS FPLNLRSNSLNKRRRT TFAAIDGASLAAAAA DPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK
Subjt:  MEALLPISTSPFRFPPTANASLRPVSSFPLNLRSNSLNKRRRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK

Query:  ECGGSGLVLMDKDYFRCPECGGFLPWQSWRRFFSG
        ECGGSGLVLMDKDYFRCPECGGFLPWQSWRRFFSG
Subjt:  ECGGSGLVLMDKDYFRCPECGGFLPWQSWRRFFSG

A0A6J1L2M2 uncharacterized protein LOC1114985373.93e-8596.3Show/hide
Query:  MEALLPISTSPFRFPPTANASLRPVSSFPLNLRSNSLNKRRRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK
        MEALLPISTSPFRF PTANAS RPVS FPLNLRSNSLNKRRRT TFAAIDGASLAAAAA DPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK
Subjt:  MEALLPISTSPFRFPPTANASLRPVSSFPLNLRSNSLNKRRRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCK

Query:  ECGGSGLVLMDKDYFRCPECGGFLPWQSWRRFFSG
        ECGGSGLVLMDKDYFRCPECGGFLPWQSWRRFFSG
Subjt:  ECGGSGLVLMDKDYFRCPECGGFLPWQSWRRFFSG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G55570.1 unknown protein6.1e-3368.42Show/hide
Query:  RRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLMDKDYFRCPECGGFLPWQSWRRFFSG
        RR  T +A+   S  A   A+  + EITWQI+VG IAG+ PFVVAG+EFSKRI+AQKRC+ECGG+GLV  DK YFRCPECGGFLPWQSWRRFF+G
Subjt:  RRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLMDKDYFRCPECGGFLPWQSWRRFFSG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCCTTGCTCCCAATTTCTACCTCTCCCTTCCGATTCCCTCCCACAGCCAATGCCAGCCTTCGTCCTGTTTCTTCTTTCCCCCTCAATCTGCGTTCAAAT
TCGCTCAATAAGCGGAGACGAACGCACACGTTTGCGGCCATTGATGGCGCTTCGCTTGCAGCAGCAGCAGCAGCCGATCCCACTCAGGTTGAAATCACTTGGCAG
ATTGTCGTGGGAGCGATTGCTGGAGTGACCCCGTTCGTGGTGGCCGGAATCGAGTTCAGCAAGCGGATTGTGGCTCAGAAGAGATGTAAAGAATGTGGTGGTTCG
GGGCTTGTTTTGATGGACAAAGACTACTTCCGTTGCCCTGAATGCGGTGGTTTTTTGCCATGGCAGTCGTGGAGGCGATTCTTTTCGGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCCTTGCTCCCAATTTCTACCTCTCCCTTCCGATTCCCTCCCACAGCCAATGCCAGCCTTCGTCCTGTTTCTTCTTTCCCCCTCAATCTGCGTTCAAAT
TCGCTCAATAAGCGGAGACGAACGCACACGTTTGCGGCCATTGATGGCGCTTCGCTTGCAGCAGCAGCAGCAGCCGATCCCACTCAGGTTGAAATCACTTGGCAG
ATTGTCGTGGGAGCGATTGCTGGAGTGACCCCGTTCGTGGTGGCCGGAATCGAGTTCAGCAAGCGGATTGTGGCTCAGAAGAGATGTAAAGAATGTGGTGGTTCG
GGGCTTGTTTTGATGGACAAAGACTACTTCCGTTGCCCTGAATGCGGTGGTTTTTTGCCATGGCAGTCGTGGAGGCGATTCTTTTCGGGCTAA
Protein sequenceShow/hide protein sequence
MEALLPISTSPFRFPPTANASLRPVSSFPLNLRSNSLNKRRRTHTFAAIDGASLAAAAAADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCKECGGS
GLVLMDKDYFRCPECGGFLPWQSWRRFFSG