CuGenDBv2

Gene ID	Csor.00g208570
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	centromere protein V-like
Genome location	Csor_Chr05:7991939..7995114
RNA-Seq Expression	Csor.00g208570
Synteny	Csor.00g208570
Gene Ontology terms	GO:0016846 - carbon-sulfur lyase activity (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR006913 - CENP-V/GFA domain IPR011057 - Mss4-like superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6599075.1 Centromere protein V, partial [Cucurbita argyrosperma subsp. sororia]

3.47e-146

100

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Query:  MPVSCRHRLPDSQSRTPTGHRVRFDYIRRRRLSKWIPLFKESEQSFTKRLKGVISSIMDSELVVHNGGCHCKNVRWRVEAPTSVVAWDCNCSDCFMRANT
        MPVSCRHRLPDSQSRTPTGHRVRFDYIRRRRLSKWIPLFKESEQSFTKRLKGVISSIMDSELVVHNGGCHCKNVRWRVEAPTSVVAWDCNCSDCFMRANT
Subjt:  MPVSCRHRLPDSQSRTPTGHRVRFDYIRRRRLSKWIPLFKESEQSFTKRLKGVISSIMDSELVVHNGGCHCKNVRWRVEAPTSVVAWDCNCSDCFMRANT

Query:  HFIVPLERFKLLGDSKNFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFKCVDPGTLTHVEIRQFDGSNWEASYGHTGIASFSKLS
        HFIVPLERFKLLGDSKNFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFKCVDPGTLTHVEIRQFDGSNWEASYGHTGIASFSKLS
Subjt:  HFIVPLERFKLLGDSKNFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFKCVDPGTLTHVEIRQFDGSNWEASYGHTGIASFSKLS

KAG7030011.1 Centromere protein V, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.68e-114

100

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Query:  KESEQSFTKRLKGVISSIMDSELVVHNGGCHCKNVRWRVEAPTSVVAWDCNCSDCFMRANTHFIVPLERFKLLGDSKNFISTYTFGTHTAKHTFCKVCGI
        KESEQSFTKRLKGVISSIMDSELVVHNGGCHCKNVRWRVEAPTSVVAWDCNCSDCFMRANTHFIVPLERFKLLGDSKNFISTYTFGTHTAKHTFCKVCGI
Subjt:  KESEQSFTKRLKGVISSIMDSELVVHNGGCHCKNVRWRVEAPTSVVAWDCNCSDCFMRANTHFIVPLERFKLLGDSKNFISTYTFGTHTAKHTFCKVCGI

Query:  TSFYHPRSNPDGVAITFKCVDPGTLTHVEIRQFDGSNWEASYGHTGIASFSKLS
        TSFYHPRSNPDGVAITFKCVDPGTLTHVEIRQFDGSNWEASYGHTGIASFSKLS
Subjt:  TSFYHPRSNPDGVAITFKCVDPGTLTHVEIRQFDGSNWEASYGHTGIASFSKLS

XP_022946627.1 centromere protein V-like [Cucurbita moschata]

4.54e-102

100

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Query:  MDSELVVHNGGCHCKNVRWRVEAPTSVVAWDCNCSDCFMRANTHFIVPLERFKLLGDSKNFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK
        MDSELVVHNGGCHCKNVRWRVEAPTSVVAWDCNCSDCFMRANTHFIVPLERFKLLGDSKNFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK
Subjt:  MDSELVVHNGGCHCKNVRWRVEAPTSVVAWDCNCSDCFMRANTHFIVPLERFKLLGDSKNFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHVEIRQFDGSNWEASYGHTGIASFSKLS
        CVDPGTLTHVEIRQFDGSNWEASYGHTGIASFSKLS
Subjt:  CVDPGTLTHVEIRQFDGSNWEASYGHTGIASFSKLS

XP_022999779.1 centromere protein V-like [Cucurbita maxima]

1.03e-98

97.06

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Query:  MDSELVVHNGGCHCKNVRWRVEAPTSVVAWDCNCSDCFMRANTHFIVPLERFKLLGDSKNFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK
        MDSELVVHNGGCHCK VRWRVEAP SVVAWDCNCSDCFMRANTHFIVPLERFKLLGDSKNFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK
Subjt:  MDSELVVHNGGCHCKNVRWRVEAPTSVVAWDCNCSDCFMRANTHFIVPLERFKLLGDSKNFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHVEIRQFDGSNWEASYGHTGIASFSKLS
        CVDPGTL +VEIRQFDGSNWEASYGHTGIASFSKLS
Subjt:  CVDPGTLTHVEIRQFDGSNWEASYGHTGIASFSKLS

XP_023546052.1 centromere protein V [Cucurbita pepo subsp. pepo]

8.78e-100

97.79

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Query:  MDSELVVHNGGCHCKNVRWRVEAPTSVVAWDCNCSDCFMRANTHFIVPLERFKLLGDSKNFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK
        MDSELV HNGGCHCK VRWRVEAP SVVAWDCNCSDCFMRANTHFIVPLERFKLLGDSKNFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK
Subjt:  MDSELVVHNGGCHCKNVRWRVEAPTSVVAWDCNCSDCFMRANTHFIVPLERFKLLGDSKNFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHVEIRQFDGSNWEASYGHTGIASFSKLS
        CVDPGTLTHVEIRQFDGSNWEASYGHTGIASFSKLS
Subjt:  CVDPGTLTHVEIRQFDGSNWEASYGHTGIASFSKLS

TrEMBL top hits

e value

%identity

Alignment

A0A1S4E4W3 centromere protein V isoform X6

3.29e-93

91.85

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Query:  MDSELVVHNGGCHCKNVRWRVEAPTSVVAWDCNCSDCFMRANTHFIVPLERFKLLGDSKNFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK
        M SELVVHNGGCHCK VRWRVEAP SVVAWDCNCS+CFMRANTHFIVPLERFKLLGDS NF+STYTFG+HTAKHTFCK CGITSFY PRSNPDGVAITFK
Subjt:  MDSELVVHNGGCHCKNVRWRVEAPTSVVAWDCNCSDCFMRANTHFIVPLERFKLLGDSKNFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHVEIRQFDGSNWEASYGHTGIASFSKL
        CVDPGTLTHVE+RQFDGSNWEASY HTGIASFSKL
Subjt:  CVDPGTLTHVEIRQFDGSNWEASYGHTGIASFSKL

A0A6J1DWG7 centromere protein V isoform X1

2.35e-96

71.35

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Query:  MPVSCRHRLPDSQSRTPTGHRVRFDYIRRRRLSKWIPLFKESEQSFTKRLKGVISSIMDSELVVHNGGCHCKNVRWRVEAPTSVVAWDCNCSDCFMRANT
        MPV C H+   SQ RTPTGHR+    +       +  L +++  SF KR +G  S +M SELVVH+G CHCK VRWRV+AP  VVAWDCNCS+CFMR NT
Subjt:  MPVSCRHRLPDSQSRTPTGHRVRFDYIRRRRLSKWIPLFKESEQSFTKRLKGVISSIMDSELVVHNGGCHCKNVRWRVEAPTSVVAWDCNCSDCFMRANT

Query:  HFIVPLERFKLLGDSKNFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFKCVDPGTLTHVEIRQFDGSNWEASYGHTGIASFSKL
        HFIVP E F+LLGDS+ FISTYTFGT TAKHTFCKVCGITSFY PRSNPDGVAITFKCVDPGTLTHVEIRQFDG NWEASY HTGIASFSK+
Subjt:  HFIVPLERFKLLGDSKNFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFKCVDPGTLTHVEIRQFDGSNWEASYGHTGIASFSKL

A0A6J1E1M0 centromere protein V isoform X2

1.40e-96

71.35

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Query:  MPVSCRHRLPDSQSRTPTGHRVRFDYIRRRRLSKWIPLFKESEQSFTKRLKGVISSIMDSELVVHNGGCHCKNVRWRVEAPTSVVAWDCNCSDCFMRANT
        MPV C H+   SQ RTPTGHR+R                 ++  SF KR +G  S +M SELVVH+G CHCK VRWRV+AP  VVAWDCNCS+CFMR NT
Subjt:  MPVSCRHRLPDSQSRTPTGHRVRFDYIRRRRLSKWIPLFKESEQSFTKRLKGVISSIMDSELVVHNGGCHCKNVRWRVEAPTSVVAWDCNCSDCFMRANT

Query:  HFIVPLERFKLLGDSKNFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFKCVDPGTLTHVEIRQFDGSNWEASYGHTGIASFSKL
        HFIVP E F+LLGDS+ FISTYTFGT TAKHTFCKVCGITSFY PRSNPDGVAITFKCVDPGTLTHVEIRQFDG NWEASY HTGIASFSK+
Subjt:  HFIVPLERFKLLGDSKNFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFKCVDPGTLTHVEIRQFDGSNWEASYGHTGIASFSKL

A0A6J1G4E1 centromere protein V-like

2.20e-102

100

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Query:  MDSELVVHNGGCHCKNVRWRVEAPTSVVAWDCNCSDCFMRANTHFIVPLERFKLLGDSKNFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK
        MDSELVVHNGGCHCKNVRWRVEAPTSVVAWDCNCSDCFMRANTHFIVPLERFKLLGDSKNFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK
Subjt:  MDSELVVHNGGCHCKNVRWRVEAPTSVVAWDCNCSDCFMRANTHFIVPLERFKLLGDSKNFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHVEIRQFDGSNWEASYGHTGIASFSKLS
        CVDPGTLTHVEIRQFDGSNWEASYGHTGIASFSKLS
Subjt:  CVDPGTLTHVEIRQFDGSNWEASYGHTGIASFSKLS

A0A6J1KE30 centromere protein V-like

4.96e-99

97.06

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Query:  MDSELVVHNGGCHCKNVRWRVEAPTSVVAWDCNCSDCFMRANTHFIVPLERFKLLGDSKNFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK
        MDSELVVHNGGCHCK VRWRVEAP SVVAWDCNCSDCFMRANTHFIVPLERFKLLGDSKNFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK
Subjt:  MDSELVVHNGGCHCKNVRWRVEAPTSVVAWDCNCSDCFMRANTHFIVPLERFKLLGDSKNFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHVEIRQFDGSNWEASYGHTGIASFSKLS
        CVDPGTL +VEIRQFDGSNWEASYGHTGIASFSKLS
Subjt:  CVDPGTLTHVEIRQFDGSNWEASYGHTGIASFSKLS

SwissProt top hits

e value

%identity

Alignment

Q7Z7K6 Centromere protein V

3.4e-34

42.08

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Query:  PDSQSRTPTGHRVRFDYIRRRRLSKWIPLFKESEQSFTKRLKGVISSIMDSELVVHNGGCHCKNVRWRVEAPTSVVAWDCNCSDCFMRANTHFIVPLERF
        P     TPT      D   +R   +W    K  + +     K ++ +     LV H GGCHC  VR+ V A   +  +DCNCS C  + N HFIVP  RF
Subjt:  PDSQSRTPTGHRVRFDYIRRRRLSKWIPLFKESEQSFTKRLKGVISSIMDSELVVHNGGCHCKNVRWRVEAPTSVVAWDCNCSDCFMRANTHFIVPLERF

Query:  KLLGDSKNFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFKCVDPGTLTHVEIRQFDGSNWE-ASYGHTGIASFSK
        KLL  +++ I+TYTF TH A+HTFCK CG+ SFY PRSNP G  I   C+D GT+  +   +F+GS+WE A   H  I + SK
Subjt:  KLLGDSKNFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFKCVDPGTLTHVEIRQFDGSNWE-ASYGHTGIASFSK

Q9CXS4 Centromere protein V

6.9e-35

46.54

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Query:  KWIPLFKESEQSFTKRLKGVISSIMDSELVVHNGGCHCKNVRWRVEAPTSVVAWDCNCSDCFMRANTHFIVPLERFKLLGDSKNFISTYTFGTHTAKHTF
        +W    K    SF    K ++ +     LV H GGCHC  VR+ V A   +  +DCNCS C  + N HFIVP  RFKLL  +++ I+TYTF TH A+HTF
Subjt:  KWIPLFKESEQSFTKRLKGVISSIMDSELVVHNGGCHCKNVRWRVEAPTSVVAWDCNCSDCFMRANTHFIVPLERFKLLGDSKNFISTYTFGTHTAKHTF

Query:  CKVCGITSFYHPRSNPDGVAITFKCVDPGTLTHVEIRQFDGSNWE-ASYGHTGIASFSK
        CK CG+ SFY PRSNP G  I   C+D GT+  V   +F+GS+WE A   H  I + SK
Subjt:  CKVCGITSFYHPRSNPDGVAITFKCVDPGTLTHVEIRQFDGSNWE-ASYGHTGIASFSK

Arabidopsis top hits

e value

%identity

Alignment

AT5G16940.1 carbon-sulfur lyases

4.1e-59

70.9

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Query:  MDSELVVHNGGCHCKNVRWRVEAPTSVVAWDCNCSDCFMRANTHFIVPLERFKLLGDSKNFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK
        M+SEL+ H GGCHC  ++WRV+A  SV+AW CNCSDC MR N HFIVP   F+LL DSK+FI+TYTFGTHTAKHTFCKVCGITSFY PRSNPDGVA+T K
Subjt:  MDSELVVHNGGCHCKNVRWRVEAPTSVVAWDCNCSDCFMRANTHFIVPLERFKLLGDSKNFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHVEIRQFDGSNWEASYGHTGIASFSK
        CV  GTL H+E++ +DG NWE S+  TGIASFSK
Subjt:  CVDPGTLTHVEIRQFDGSNWEASYGHTGIASFSK

AT5G16940.2 carbon-sulfur lyases

4.1e-59

70.9

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Query:  MDSELVVHNGGCHCKNVRWRVEAPTSVVAWDCNCSDCFMRANTHFIVPLERFKLLGDSKNFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK
        M+SEL+ H GGCHC  ++WRV+A  SV+AW CNCSDC MR N HFIVP   F+LL DSK+FI+TYTFGTHTAKHTFCKVCGITSFY PRSNPDGVA+T K
Subjt:  MDSELVVHNGGCHCKNVRWRVEAPTSVVAWDCNCSDCFMRANTHFIVPLERFKLLGDSKNFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHVEIRQFDGSNWEASYGHTGIASFSK
        CV  GTL H+E++ +DG NWE S+  TGIASFSK
Subjt:  CVDPGTLTHVEIRQFDGSNWEASYGHTGIASFSK

Sequences

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CDS sequence

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ATGCCCGTAAGCTGTCGCCACCGGCTCCCTGATTCACAGTCGCGAACGCCCACAGGCCATAGGGTTAGATTTGACTATATAAGAAGGAGGAGACTCTCCAAATGG
ATCCCCCTGTTTAAGGAAAGCGAACAATCATTCACTAAAAGATTGAAAGGGGTGATTTCTTCTATAATGGACTCCGAGTTAGTTGTGCATAACGGTGGATGCCAC
TGCAAGAACGTAAGATGGCGAGTCGAAGCACCTACTAGTGTCGTAGCTTGGGATTGTAACTGTTCTGATTGCTTCATGAGGGCCAATACACATTTTATTGTGCCT
TTGGAACGGTTCAAACTTTTAGGAGATTCCAAGAACTTTATTTCAACCTATACGTTTGGTACTCACACTGCAAAACATACCTTCTGTAAAGTTTGTGGCATTACC
TCATTTTACCATCCACGCTCAAACCCAGATGGAGTTGCCATTACTTTCAAATGTGTTGATCCTGGAACATTGACCCATGTTGAGATTAGGCAGTTTGATGGGAGC
AACTGGGAGGCCTCATATGGTCATACAGGCATTGCTTCATTTTCTAAGCTGTCTTAG

mRNA sequence

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Protein sequence

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MPVSCRHRLPDSQSRTPTGHRVRFDYIRRRRLSKWIPLFKESEQSFTKRLKGVISSIMDSELVVHNGGCHCKNVRWRVEAPTSVVAWDCNCSDCFMRANTHFIVP
LERFKLLGDSKNFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFKCVDPGTLTHVEIRQFDGSNWEASYGHTGIASFSKLS

Csor.00g208570 (gene) of Silver-seed gourd (wild; sororia) v1 genome