; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Csor.00g213910 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g213910
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionProtein LUTEIN DEFICIENT 5
Genome locationCsor_Chr10:3931294..3937382
RNA-Seq ExpressionCsor.00g213910
SyntenyCsor.00g213910
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590081.1 hypothetical protein SDJN03_15504, partial [Cucurbita argyrosperma subsp. sororia]2.10e-222100Show/hide
Query:  MANEEGDPMVRFTRETMQHEVEHLEEGESSSTSATNLVIDTIKSNAFETDQAEAQSTTLVLPSSEAGRGSLMSEDNAYNNGGQQAGLGVGSSYWGINGYQ
        MANEEGDPMVRFTRETMQHEVEHLEEGESSSTSATNLVIDTIKSNAFETDQAEAQSTTLVLPSSEAGRGSLMSEDNAYNNGGQQAGLGVGSSYWGINGYQ
Subjt:  MANEEGDPMVRFTRETMQHEVEHLEEGESSSTSATNLVIDTIKSNAFETDQAEAQSTTLVLPSSEAGRGSLMSEDNAYNNGGQQAGLGVGSSYWGINGYQ

Query:  FAATNMGSEHFPLAVAATTPTAIHLSNAQEGMGGGNNQYPSEFLQTPSSEQWYPLNKIDVQQQPSSNPFRSEEIQFQGLLNQGPSNGTFYSNGLSTIQFP
        FAATNMGSEHFPLAVAATTPTAIHLSNAQEGMGGGNNQYPSEFLQTPSSEQWYPLNKIDVQQQPSSNPFRSEEIQFQGLLNQGPSNGTFYSNGLSTIQFP
Subjt:  FAATNMGSEHFPLAVAATTPTAIHLSNAQEGMGGGNNQYPSEFLQTPSSEQWYPLNKIDVQQQPSSNPFRSEEIQFQGLLNQGPSNGTFYSNGLSTIQFP

Query:  QTRLNLQDGLPSPSNLHLSRNWISEGNGLSNATTPPTSRSPQNRNAVYDPTYESMGLPVDPHLRMFLARRDPTDQRCEWDVEAPRHLSSATGIRNTLISF
        QTRLNLQDGLPSPSNLHLSRNWISEGNGLSNATTPPTSRSPQNRNAVYDPTYESMGLPVDPHLRMFLARRDPTDQRCEWDVEAPRHLSSATGIRNTLISF
Subjt:  QTRLNLQDGLPSPSNLHLSRNWISEGNGLSNATTPPTSRSPQNRNAVYDPTYESMGLPVDPHLRMFLARRDPTDQRCEWDVEAPRHLSSATGIRNTLISF

Query:  EVVVVIV
        EVVVVIV
Subjt:  EVVVVIV

KAG7023746.1 hypothetical protein SDJN02_14772, partial [Cucurbita argyrosperma subsp. argyrosperma]3.63e-18695.67Show/hide
Query:  PMVRFTRETMQHEVEHLEEGESSSTSATNLVIDTIKSNAFETDQAEAQSTTLVLPSSEAGRGSLMSEDNAYNNGGQQAGLGVGSSYWGINGYQFAATNMG
        PMVRFTRETMQHEVEHLEEGESSSTSATNLVIDTIKSNAFETDQAEAQSTTLVLPSSEAGRGSLMSEDNAYNNGGQQAGLG GSSYWGINGYQFAATNMG
Subjt:  PMVRFTRETMQHEVEHLEEGESSSTSATNLVIDTIKSNAFETDQAEAQSTTLVLPSSEAGRGSLMSEDNAYNNGGQQAGLGVGSSYWGINGYQFAATNMG

Query:  SEHFPLAVAATTPTAIHLSNAQEGMGGGNNQYPSEFLQTPSSEQWYPLNKIDVQQQPSSNPFRSEEIQFQGLLNQGPSNGTFYSNGLSTIQFPQTRLNLQ
        SEHFPLAVAATTPTAIHLSNAQEGMGGGNNQYPSEFLQTPSSEQWYPLNKIDVQQQPSSNPFRSEEIQFQGLLNQGPSNGTFYSNGLSTIQFPQTRLNLQ
Subjt:  SEHFPLAVAATTPTAIHLSNAQEGMGGGNNQYPSEFLQTPSSEQWYPLNKIDVQQQPSSNPFRSEEIQFQGLLNQGPSNGTFYSNGLSTIQFPQTRLNLQ

Query:  DGLPSPSNLHLSRNWISEGNGLSNATTPPTS-----------RSPQNRNAVYDPTYESMGLPVDPHLRMFLARRDPT
        DGLPSPSNLHLSRNWISEGNGLSNATTPPTS           RSPQNRNAVYDPTYESMGLPVDPHLRMFLARRDPT
Subjt:  DGLPSPSNLHLSRNWISEGNGLSNATTPPTS-----------RSPQNRNAVYDPTYESMGLPVDPHLRMFLARRDPT

XP_008443727.1 PREDICTED: uncharacterized protein LOC103487245 isoform X1 [Cucumis melo]9.17e-8567.92Show/hide
Query:  EAGRGSLMSEDNAYNNGGQQAGLGVGSSYWGINGYQFAA-TN-MGSEHFPLAVAATTPTAIHLSNAQEGMGGGNNQYPSEFLQTPSSEQWYPLNKIDVQQ
        EAG G+LMSEDNA N                 N YQFA  TN +GS++FPLAV  TTPT +H+SNAQE MGG N+QYP  F QT S +QWYPL K +  Q
Subjt:  EAGRGSLMSEDNAYNNGGQQAGLGVGSSYWGINGYQFAA-TN-MGSEHFPLAVAATTPTAIHLSNAQEGMGGGNNQYPSEFLQTPSSEQWYPLNKIDVQQ

Query:  QPSSNPFRSEEIQFQGLLNQGPSNGTFYSNGLSTIQFPQTRLNLQDGLPSPSNLHLSRNWISEGNGLSNATTPPTSRSP-QNRNAVYDPTYESMGLPVDP
         PSS PF +EEIQF GLLNQG SNG FY +GLS  QFPQ RLNLQD LPS SNLHL RNWISE N LSNATTPPTSRS  ++RNAVYDPTYESMGLP+DP
Subjt:  QPSSNPFRSEEIQFQGLLNQGPSNGTFYSNGLSTIQFPQTRLNLQDGLPSPSNLHLSRNWISEGNGLSNATTPPTSRSP-QNRNAVYDPTYESMGLPVDP

Query:  HLRMFLARRDPT
        HLRMFLARRDPT
Subjt:  HLRMFLARRDPT

XP_008443728.1 PREDICTED: uncharacterized protein LOC103487245 isoform X2 [Cucumis melo]4.71e-8567.92Show/hide
Query:  EAGRGSLMSEDNAYNNGGQQAGLGVGSSYWGINGYQFAA-TN-MGSEHFPLAVAATTPTAIHLSNAQEGMGGGNNQYPSEFLQTPSSEQWYPLNKIDVQQ
        EAG G+LMSEDNA N                 N YQFA  TN +GS++FPLAV  TTPT +H+SNAQE MGG N+QYP  F QT S +QWYPL K +  Q
Subjt:  EAGRGSLMSEDNAYNNGGQQAGLGVGSSYWGINGYQFAA-TN-MGSEHFPLAVAATTPTAIHLSNAQEGMGGGNNQYPSEFLQTPSSEQWYPLNKIDVQQ

Query:  QPSSNPFRSEEIQFQGLLNQGPSNGTFYSNGLSTIQFPQTRLNLQDGLPSPSNLHLSRNWISEGNGLSNATTPPTSRSP-QNRNAVYDPTYESMGLPVDP
         PSS PF +EEIQF GLLNQG SNG FY +GLS  QFPQ RLNLQD LPS SNLHL RNWISE N LSNATTPPTSRS  ++RNAVYDPTYESMGLP+DP
Subjt:  QPSSNPFRSEEIQFQGLLNQGPSNGTFYSNGLSTIQFPQTRLNLQDGLPSPSNLHLSRNWISEGNGLSNATTPPTSRSP-QNRNAVYDPTYESMGLPVDP

Query:  HLRMFLARRDPT
        HLRMFLARRDPT
Subjt:  HLRMFLARRDPT

XP_024926664.1 uncharacterized protein LOC112490671 [Ziziphus jujuba]3.20e-1340.27Show/hide
Query:  GGNNQYPSEFLQTPSSEQWYPLNKIDVQQQPSS-NPFRSEEIQFQGL---LNQGPSNGTF-----YSNGLSTIQFPQTRLNLQDGLPSPSNLHLSRNWIS
        G +N YPS    T +S+   P+  + +QQ  S  N   S  + F+GL    N+    G F     Y  G S+ +  + ++  QD +P   NL L+ +WIS
Subjt:  GGNNQYPSEFLQTPSSEQWYPLNKIDVQQQPSS-NPFRSEEIQFQGL---LNQGPSNGTF-----YSNGLSTIQFPQTRLNLQDGLPSPSNLHLSRNWIS

Query:  EGNGLS--NATTPPTSRSPQNRNAVYDPTYESMGLPVDPHLRMFLARRD
        +G G    N +T  T  S   RN VYDP YE+MGLPVDPHLRMF+ RRD
Subjt:  EGNGLS--NATTPPTSRSPQNRNAVYDPTYESMGLPVDPHLRMFLARRD

TrEMBL top hitse value%identityAlignment
A0A1S3B887 uncharacterized protein LOC103487245 isoform X14.44e-8567.92Show/hide
Query:  EAGRGSLMSEDNAYNNGGQQAGLGVGSSYWGINGYQFAA-TN-MGSEHFPLAVAATTPTAIHLSNAQEGMGGGNNQYPSEFLQTPSSEQWYPLNKIDVQQ
        EAG G+LMSEDNA N                 N YQFA  TN +GS++FPLAV  TTPT +H+SNAQE MGG N+QYP  F QT S +QWYPL K +  Q
Subjt:  EAGRGSLMSEDNAYNNGGQQAGLGVGSSYWGINGYQFAA-TN-MGSEHFPLAVAATTPTAIHLSNAQEGMGGGNNQYPSEFLQTPSSEQWYPLNKIDVQQ

Query:  QPSSNPFRSEEIQFQGLLNQGPSNGTFYSNGLSTIQFPQTRLNLQDGLPSPSNLHLSRNWISEGNGLSNATTPPTSRSP-QNRNAVYDPTYESMGLPVDP
         PSS PF +EEIQF GLLNQG SNG FY +GLS  QFPQ RLNLQD LPS SNLHL RNWISE N LSNATTPPTSRS  ++RNAVYDPTYESMGLP+DP
Subjt:  QPSSNPFRSEEIQFQGLLNQGPSNGTFYSNGLSTIQFPQTRLNLQDGLPSPSNLHLSRNWISEGNGLSNATTPPTSRSP-QNRNAVYDPTYESMGLPVDP

Query:  HLRMFLARRDPT
        HLRMFLARRDPT
Subjt:  HLRMFLARRDPT

A0A1S3B8P4 uncharacterized protein LOC103487245 isoform X22.28e-8567.92Show/hide
Query:  EAGRGSLMSEDNAYNNGGQQAGLGVGSSYWGINGYQFAA-TN-MGSEHFPLAVAATTPTAIHLSNAQEGMGGGNNQYPSEFLQTPSSEQWYPLNKIDVQQ
        EAG G+LMSEDNA N                 N YQFA  TN +GS++FPLAV  TTPT +H+SNAQE MGG N+QYP  F QT S +QWYPL K +  Q
Subjt:  EAGRGSLMSEDNAYNNGGQQAGLGVGSSYWGINGYQFAA-TN-MGSEHFPLAVAATTPTAIHLSNAQEGMGGGNNQYPSEFLQTPSSEQWYPLNKIDVQQ

Query:  QPSSNPFRSEEIQFQGLLNQGPSNGTFYSNGLSTIQFPQTRLNLQDGLPSPSNLHLSRNWISEGNGLSNATTPPTSRSP-QNRNAVYDPTYESMGLPVDP
         PSS PF +EEIQF GLLNQG SNG FY +GLS  QFPQ RLNLQD LPS SNLHL RNWISE N LSNATTPPTSRS  ++RNAVYDPTYESMGLP+DP
Subjt:  QPSSNPFRSEEIQFQGLLNQGPSNGTFYSNGLSTIQFPQTRLNLQDGLPSPSNLHLSRNWISEGNGLSNATTPPTSRSP-QNRNAVYDPTYESMGLPVDP

Query:  HLRMFLARRDPT
        HLRMFLARRDPT
Subjt:  HLRMFLARRDPT

A0A2P5AJ85 Uncharacterized protein1.12e-1029.88Show/hide
Query:  GSSYWGI-NGYQFAATNMGSEHFPLAVAATTPTAIHLSNAQEGMGGGNNQYPSEFLQTPSSEQW--YPL-NKIDVQQQPSSNPFRSEEIQFQGLLNQGPS
        G+  +GI N Y    +N+  E F L  ++         N++     G+  +P  F++T    QW  +PL N+I + +  SS    ++EIQFQGLLNQ   
Subjt:  GSSYWGI-NGYQFAATNMGSEHFPLAVAATTPTAIHLSNAQEGMGGGNNQYPSEFLQTPSSEQW--YPL-NKIDVQQQPSSNPFRSEEIQFQGLLNQGPS

Query:  NGTFYSN----------------------------------------------------GLSTIQFPQTRLNLQDG---LPSPSNLHLSRNWISEGNGLS
          TFY N                                                    G S+++ P+ ++  +D    +PSP NL L+       + LS
Subjt:  NGTFYSN----------------------------------------------------GLSTIQFPQTRLNLQDG---LPSPSNLHLSRNWISEGNGLS

Query:  NATTPPTSRSPQNRNAVYDPTYESMGLPVDPHLRMFLARRD
             PT      RN VYDP YE MGLPVDPHLR+F+ RRD
Subjt:  NATTPPTSRSPQNRNAVYDPTYESMGLPVDPHLRMFLARRD

A0A2P5B9L5 Uncharacterized protein4.58e-1337.95Show/hide
Query:  ATTPTAIHLSNAQEGMGGGNNQYPSEFLQTPSSEQWYPLNKIDVQQQPSSNPF---RSEEIQFQGLLNQGPSNGTFYSN-----GLSTIQFPQTRLNLQD
        AT    I        + G N  YP+      SS    P   I    QP  NPF    S     +GL     + G F ++     G S+++ P+ R+  QD
Subjt:  ATTPTAIHLSNAQEGMGGGNNQYPSEFLQTPSSEQWYPLNKIDVQQQPSSNPF---RSEEIQFQGLLNQGPSNGTFYSN-----GLSTIQFPQTRLNLQD

Query:  G---LPSPSNLHLSRNWISEGNGLSNATTPPTSRSPQNRNAVYDPTYESMGLPVDPHLRMFLARRD
            LPSP NL L+ +W+S+G+ LS  +  PT  S   RN VYDP YE MGLPVDPHLR+F+  RD
Subjt:  G---LPSPSNLHLSRNWISEGNGLSNATTPPTSRSPQNRNAVYDPTYESMGLPVDPHLRMFLARRD

A0A6P6FXF1 uncharacterized protein LOC1124906711.55e-1340.27Show/hide
Query:  GGNNQYPSEFLQTPSSEQWYPLNKIDVQQQPSS-NPFRSEEIQFQGL---LNQGPSNGTF-----YSNGLSTIQFPQTRLNLQDGLPSPSNLHLSRNWIS
        G +N YPS    T +S+   P+  + +QQ  S  N   S  + F+GL    N+    G F     Y  G S+ +  + ++  QD +P   NL L+ +WIS
Subjt:  GGNNQYPSEFLQTPSSEQWYPLNKIDVQQQPSS-NPFRSEEIQFQGL---LNQGPSNGTF-----YSNGLSTIQFPQTRLNLQDGLPSPSNLHLSRNWIS

Query:  EGNGLS--NATTPPTSRSPQNRNAVYDPTYESMGLPVDPHLRMFLARRD
        +G G    N +T  T  S   RN VYDP YE+MGLPVDPHLRMF+ RRD
Subjt:  EGNGLS--NATTPPTSRSPQNRNAVYDPTYESMGLPVDPHLRMFLARRD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAATGAAGAAGGTGATCCTATGGTGAGATTCACTAGGGAGACCATGCAACATGAAGTGGAGCATTTGGAGGAAGGAGAATCGTCTTCTACATCAGCTACTAATTT
AGTTATCGATACGATAAAATCGAACGCATTTGAAACTGACCAAGCTGAAGCTCAATCGACAACTTTAGTACTTCCCTCGTCTGAAGCAGGAAGGGGGAGTTTGATGAGTG
AGGATAATGCATACAATAATGGGGGCCAACAGGCAGGACTTGGTGTTGGGAGTTCATATTGGGGTATCAATGGGTATCAGTTTGCAGCAACCAATATGGGCTCAGAGCAC
TTCCCTTTGGCTGTGGCTGCTACTACTCCCACTGCCATCCACCTCTCCAACGCTCAGGAGGGTATGGGTGGTGGGAACAATCAATACCCATCAGAGTTCTTACAAACGCC
ATCGAGTGAACAATGGTATCCACTCAACAAGATTGATGTCCAACAACAACCCTCCTCAAATCCATTTAGGTCAGAAGAAATACAATTTCAAGGACTACTAAACCAAGGAC
CATCAAATGGCACCTTTTACTCAAATGGTCTCTCAACCATCCAATTTCCTCAGACAAGATTGAATCTGCAAGATGGGCTGCCATCACCTTCCAATCTTCACCTCTCAAGG
AATTGGATCTCTGAAGGCAATGGCTTGAGCAATGCTACCACCCCTCCAACTTCAAGATCACCACAGAATAGAAATGCAGTTTATGACCCAACATATGAGTCGATGGGACT
ACCGGTAGATCCTCATTTACGCATGTTTCTGGCGAGACGTGATCCAACAGATCAAAGATGCGAATGGGATGTGGAGGCTCCTCGACACCTATCGTCTGCTACCGGCATAC
GTAATACCTTAATTTCTTTCGAAGTTGTTGTGGTGATCGTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAAATGAAGAAGGTGATCCTATGGTGAGATTCACTAGGGAGACCATGCAACATGAAGTGGAGCATTTGGAGGAAGGAGAATCGTCTTCTACATCAGCTACTAATTT
AGTTATCGATACGATAAAATCGAACGCATTTGAAACTGACCAAGCTGAAGCTCAATCGACAACTTTAGTACTTCCCTCGTCTGAAGCAGGAAGGGGGAGTTTGATGAGTG
AGGATAATGCATACAATAATGGGGGCCAACAGGCAGGACTTGGTGTTGGGAGTTCATATTGGGGTATCAATGGGTATCAGTTTGCAGCAACCAATATGGGCTCAGAGCAC
TTCCCTTTGGCTGTGGCTGCTACTACTCCCACTGCCATCCACCTCTCCAACGCTCAGGAGGGTATGGGTGGTGGGAACAATCAATACCCATCAGAGTTCTTACAAACGCC
ATCGAGTGAACAATGGTATCCACTCAACAAGATTGATGTCCAACAACAACCCTCCTCAAATCCATTTAGGTCAGAAGAAATACAATTTCAAGGACTACTAAACCAAGGAC
CATCAAATGGCACCTTTTACTCAAATGGTCTCTCAACCATCCAATTTCCTCAGACAAGATTGAATCTGCAAGATGGGCTGCCATCACCTTCCAATCTTCACCTCTCAAGG
AATTGGATCTCTGAAGGCAATGGCTTGAGCAATGCTACCACCCCTCCAACTTCAAGATCACCACAGAATAGAAATGCAGTTTATGACCCAACATATGAGTCGATGGGACT
ACCGGTAGATCCTCATTTACGCATGTTTCTGGCGAGACGTGATCCAACAGATCAAAGATGCGAATGGGATGTGGAGGCTCCTCGACACCTATCGTCTGCTACCGGCATAC
GTAATACCTTAATTTCTTTCGAAGTTGTTGTGGTGATCGTCTAG
Protein sequenceShow/hide protein sequence
MANEEGDPMVRFTRETMQHEVEHLEEGESSSTSATNLVIDTIKSNAFETDQAEAQSTTLVLPSSEAGRGSLMSEDNAYNNGGQQAGLGVGSSYWGINGYQFAATNMGSEH
FPLAVAATTPTAIHLSNAQEGMGGGNNQYPSEFLQTPSSEQWYPLNKIDVQQQPSSNPFRSEEIQFQGLLNQGPSNGTFYSNGLSTIQFPQTRLNLQDGLPSPSNLHLSR
NWISEGNGLSNATTPPTSRSPQNRNAVYDPTYESMGLPVDPHLRMFLARRDPTDQRCEWDVEAPRHLSSATGIRNTLISFEVVVVIV