; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Csor.00g217660 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g217660
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionOxysterol-binding protein-related protein 4B-like
Genome locationCsor_Chr10:1930329..1930724
RNA-Seq ExpressionCsor.00g217660
SyntenyCsor.00g217660
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058273.1 oxysterol-binding protein-related protein 4B-like [Cucumis melo var. makuwa]4.04e-4155.63Show/hide
Query:  MGRSSRSYYYRRTSEGVPFQWEMLPGTPKNTPPLVEPVPVRIRPPPVVVSLSLLKPA-TVQNKQPQFLLFRPWRKQSKSN----NNSRPLD----DHRSK
        M RSSR +YYRRT+EGVPFQWEM PGTPK+ PPL E +P  I PPP V+SL   KP   VQNKQ  F+LF PWRKQ K       N  PLD    + R +
Subjt:  MGRSSRSYYYRRTSEGVPFQWEMLPGTPKNTPPLVEPVPVRIRPPPVVVSLSLLKPA-TVQNKQPQFLLFRPWRKQSKSN----NNSRPLD----DHRSK

Query:  FGS-----------PCKAKSPTPAAESPGHWRFGCSPWRINPIKIGTGRRV
        F S            CK +S +P  ES G WR GC PWRINPIKIG GRRV
Subjt:  FGS-----------PCKAKSPTPAAESPGHWRFGCSPWRINPIKIGTGRRV

KAG6589706.1 hypothetical protein SDJN03_15129, partial [Cucurbita argyrosperma subsp. sororia]3.61e-93100Show/hide
Query:  MGRSSRSYYYRRTSEGVPFQWEMLPGTPKNTPPLVEPVPVRIRPPPVVVSLSLLKPATVQNKQPQFLLFRPWRKQSKSNNNSRPLDDHRSKFGSPCKAKS
        MGRSSRSYYYRRTSEGVPFQWEMLPGTPKNTPPLVEPVPVRIRPPPVVVSLSLLKPATVQNKQPQFLLFRPWRKQSKSNNNSRPLDDHRSKFGSPCKAKS
Subjt:  MGRSSRSYYYRRTSEGVPFQWEMLPGTPKNTPPLVEPVPVRIRPPPVVVSLSLLKPATVQNKQPQFLLFRPWRKQSKSNNNSRPLDDHRSKFGSPCKAKS

Query:  PTPAAESPGHWRFGCSPWRINPIKIGTGRRV
        PTPAAESPGHWRFGCSPWRINPIKIGTGRRV
Subjt:  PTPAAESPGHWRFGCSPWRINPIKIGTGRRV

KAG7023386.1 hypothetical protein SDJN02_14411, partial [Cucurbita argyrosperma subsp. argyrosperma]4.59e-8799.2Show/hide
Query:  MGRSSRSYYYRRTSEGVPFQWEMLPGTPKNTPPLVEPVPVRIRPPPVVVSLSLLKPATVQNKQPQFLLFRPWRKQSKSNNNSRPLDDHRSKFGSPCKAKS
        MGRSSRSYYYRRTSEGVPFQWEMLPGTPKNTPPLVEPVPVRIRPPPVVVSLSLLKPATVQNKQPQFLLFRPWRKQSKSNNNSRPLDDHRSKFGSPCKAKS
Subjt:  MGRSSRSYYYRRTSEGVPFQWEMLPGTPKNTPPLVEPVPVRIRPPPVVVSLSLLKPATVQNKQPQFLLFRPWRKQSKSNNNSRPLDDHRSKFGSPCKAKS

Query:  PTPAAESPGHWRFGCSPWRINPIKI
        PTPAAESPGHWRFGC PWRINPIKI
Subjt:  PTPAAESPGHWRFGCSPWRINPIKI

XP_004146363.1 uncharacterized protein LOC101210202 [Cucumis sativus]1.46e-4359.06Show/hide
Query:  MGRSSRSYYYRRTSEGVPFQWEMLPGTPKNTPPLVEPVPVRIRPPPVVVSLSLLKPA-TVQNKQPQFLLFRPWRKQSKSN--NNSRPLD----DHRSKFG
        M RSSR +YYRRT+EGVPFQWEM PGTPKN PPL E +   I PPP V+SL L KP   VQNKQP F+LF PWRKQ K     N  PLD    + R +F 
Subjt:  MGRSSRSYYYRRTSEGVPFQWEMLPGTPKNTPPLVEPVPVRIRPPPVVVSLSLLKPA-TVQNKQPQFLLFRPWRKQSKSN--NNSRPLD----DHRSKFG

Query:  S-----------PCKAKSPTPAAESPGHWRFGCSPWRINPIKIGTGRRV
        S            CK KS  PA  S GHWR GC PWRINPIKIG GRRV
Subjt:  S-----------PCKAKSPTPAAESPGHWRFGCSPWRINPIKIGTGRRV

XP_038878338.1 uncharacterized protein LOC120070597 [Benincasa hispida]2.10e-4761.22Show/hide
Query:  MGRSSRSYYYRRTSEGVPFQWEMLPGTPKNTPPLVEPVPVRIRPPPVVVSLSLLKPA-TVQNKQPQFLLFRPWRKQSKSNNNSRPLDDHRSKFG------
        M RSSR +YYRRT+EGVPFQWEM PGTPKNTPPL + VP  I PPP ++SLSL KP   VQNKQP F+LF PW KQ K   N  PLD +  K        
Subjt:  MGRSSRSYYYRRTSEGVPFQWEMLPGTPKNTPPLVEPVPVRIRPPPVVVSLSLLKPA-TVQNKQPQFLLFRPWRKQSKSNNNSRPLDDHRSKFG------

Query:  ---------SPCKAKSPTPAAESPGHWRFGCSPWRINPIKIGTGRRV
                 S CKAKS   AAES GHWR GC PWRINPIKI TGRRV
Subjt:  ---------SPCKAKSPTPAAESPGHWRFGCSPWRINPIKIGTGRRV

TrEMBL top hitse value%identityAlignment
A0A0A0LUL8 Uncharacterized protein7.05e-4459.06Show/hide
Query:  MGRSSRSYYYRRTSEGVPFQWEMLPGTPKNTPPLVEPVPVRIRPPPVVVSLSLLKPA-TVQNKQPQFLLFRPWRKQSKSN--NNSRPLD----DHRSKFG
        M RSSR +YYRRT+EGVPFQWEM PGTPKN PPL E +   I PPP V+SL L KP   VQNKQP F+LF PWRKQ K     N  PLD    + R +F 
Subjt:  MGRSSRSYYYRRTSEGVPFQWEMLPGTPKNTPPLVEPVPVRIRPPPVVVSLSLLKPA-TVQNKQPQFLLFRPWRKQSKSN--NNSRPLD----DHRSKFG

Query:  S-----------PCKAKSPTPAAESPGHWRFGCSPWRINPIKIGTGRRV
        S            CK KS  PA  S GHWR GC PWRINPIKIG GRRV
Subjt:  S-----------PCKAKSPTPAAESPGHWRFGCSPWRINPIKIGTGRRV

A0A5D3CJV8 Oxysterol-binding protein-related protein 4B-like1.95e-4155.63Show/hide
Query:  MGRSSRSYYYRRTSEGVPFQWEMLPGTPKNTPPLVEPVPVRIRPPPVVVSLSLLKPA-TVQNKQPQFLLFRPWRKQSKSN----NNSRPLD----DHRSK
        M RSSR +YYRRT+EGVPFQWEM PGTPK+ PPL E +P  I PPP V+SL   KP   VQNKQ  F+LF PWRKQ K       N  PLD    + R +
Subjt:  MGRSSRSYYYRRTSEGVPFQWEMLPGTPKNTPPLVEPVPVRIRPPPVVVSLSLLKPA-TVQNKQPQFLLFRPWRKQSKSN----NNSRPLD----DHRSK

Query:  FGS-----------PCKAKSPTPAAESPGHWRFGCSPWRINPIKIGTGRRV
        F S            CK +S +P  ES G WR GC PWRINPIKIG GRRV
Subjt:  FGS-----------PCKAKSPTPAAESPGHWRFGCSPWRINPIKIGTGRRV

A0A6J1EQV3 uncharacterized protein LOC1114366865.71e-4154.97Show/hide
Query:  MGRSSRSYYYRRTSEGVPFQWEMLPGTPKNTPPLVEPVPVRIRPPPVVVSLSLLKPATVQNKQPQFLLFRPWRKQSKSNNNSRPLD---DHRSKFGS---
        +G SSR YYYRRT+EGVPFQWEM PGTPK+ PP  E V + I PPP  +SL   KPA    KQ  FLLFRPWRKQSKS  +S   D   D R++FGS   
Subjt:  MGRSSRSYYYRRTSEGVPFQWEMLPGTPKNTPPLVEPVPVRIRPPPVVVSLSLLKPATVQNKQPQFLLFRPWRKQSKSNNNSRPLD---DHRSKFGS---

Query:  -------PCKAKSPT-------PAAESPGHWRFGCSPWRINPIKIGTGRRV
               PC+ KS +       PAAES  H R GC PWRINP++I  GRRV
Subjt:  -------PCKAKSPT-------PAAESPGHWRFGCSPWRINPIKIGTGRRV

A0A6J1KZJ1 uncharacterized protein LOC1114996804.03e-4154.3Show/hide
Query:  MGRSSRSYYYRRTSEGVPFQWEMLPGTPKNTPPLVEPVPVRIRPPPVVVSLSLLKPATVQNKQPQFLLFRPWRKQSKSNNNS---RPLDDHRSKFGS---
        +G SSR YYYRRT+EGVPFQWEM PGTPK+ PP  E V + I PPP  +SL   KPA    KQ  FLLFRPWRKQSKS  +S      +D R++FGS   
Subjt:  MGRSSRSYYYRRTSEGVPFQWEMLPGTPKNTPPLVEPVPVRIRPPPVVVSLSLLKPATVQNKQPQFLLFRPWRKQSKSNNNS---RPLDDHRSKFGS---

Query:  -------PCKAKSPT-------PAAESPGHWRFGCSPWRINPIKIGTGRRV
               PC+ KS +       PAAES  H R GC PWRINP++I  GRRV
Subjt:  -------PCKAKSPT-------PAAESPGHWRFGCSPWRINPIKIGTGRRV

A0A7J9CW56 Uncharacterized protein4.06e-1535.44Show/hide
Query:  MGRSSRSYYYRRTSEGVPFQWEMLPGTPKNTPPLVEPVPVRIRPPPVVVSLSLLKP---ATVQNKQPQFLLFRPWRKQSKSNNNSRPLDDHRSK------
        +G SSR YYYR +SEG+PF WEM PGTPK   P  E V   I PPP ++SL L KP      +NK  +  +F+ W K  + N+N + +DDH+S       
Subjt:  MGRSSRSYYYRRTSEGVPFQWEMLPGTPKNTPPLVEPVPVRIRPPPVVVSLSLLKP---ATVQNKQPQFLLFRPWRKQSKSNNNSRPLDDHRSK------

Query:  ----------FGSPCKAKSP----------TPAAESPGHWRFGCSPWRINPIKIGTGR
                   GSPC + S           TP+ +S  +  +GC P       +   R
Subjt:  ----------FGSPCKAKSP----------TPAAESPGHWRFGCSPWRINPIKIGTGR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G25845.1 BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 4B (TAIR:AT4G25850.2)8.6e-0850Show/hide
Query:  SSRSYYYRRTSEGVPFQWEMLPGTPKNTPPLVEPVPVRIRPPPVVVSLSLLKPATVQNKQPQFLLF
        SS  YY  R  EGVPF+WEM PGTP NT P  E VP  + PPP ++SL L KP ++  ++P+  +F
Subjt:  SSRSYYYRRTSEGVPFQWEMLPGTPKNTPPLVEPVPVRIRPPPVVVSLSLLKPATVQNKQPQFLLF

AT4G25850.2 OSBP(oxysterol binding protein)-related protein 4B8.6e-0850Show/hide
Query:  SSRSYYYRRTSEGVPFQWEMLPGTPKNTPPLVEPVPVRIRPPPVVVSLSLLKPATVQNKQPQFLLF
        SS  YY  R  EGVPF+WEM PGTP NT P  E VP  + PPP ++SL L KP ++  ++P+  +F
Subjt:  SSRSYYYRRTSEGVPFQWEMLPGTPKNTPPLVEPVPVRIRPPPVVVSLSLLKPATVQNKQPQFLLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCGTTCCTCTCGTTCGTACTACTACAGAAGGACTTCTGAAGGGGTTCCGTTTCAGTGGGAGATGCTACCGGGGACCCCCAAGAATACTCCGCCGCTCGTGGAGCC
GGTTCCAGTGCGCATCCGCCCGCCGCCGGTTGTGGTCAGCCTTAGCCTCTTGAAGCCGGCCACGGTTCAGAATAAACAGCCGCAGTTTCTGTTATTTCGGCCGTGGAGGA
AGCAGTCCAAGTCCAACAACAATTCTCGTCCGTTGGATGACCATCGTTCGAAATTTGGATCTCCATGCAAAGCAAAATCTCCTACGCCGGCGGCGGAATCTCCCGGGCAC
TGGCGGTTTGGATGCAGTCCGTGGAGGATCAACCCTATTAAAATAGGTACTGGAAGGCGAGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTCGTTCCTCTCGTTCGTACTACTACAGAAGGACTTCTGAAGGGGTTCCGTTTCAGTGGGAGATGCTACCGGGGACCCCCAAGAATACTCCGCCGCTCGTGGAGCC
GGTTCCAGTGCGCATCCGCCCGCCGCCGGTTGTGGTCAGCCTTAGCCTCTTGAAGCCGGCCACGGTTCAGAATAAACAGCCGCAGTTTCTGTTATTTCGGCCGTGGAGGA
AGCAGTCCAAGTCCAACAACAATTCTCGTCCGTTGGATGACCATCGTTCGAAATTTGGATCTCCATGCAAAGCAAAATCTCCTACGCCGGCGGCGGAATCTCCCGGGCAC
TGGCGGTTTGGATGCAGTCCGTGGAGGATCAACCCTATTAAAATAGGTACTGGAAGGCGAGTTTAA
Protein sequenceShow/hide protein sequence
MGRSSRSYYYRRTSEGVPFQWEMLPGTPKNTPPLVEPVPVRIRPPPVVVSLSLLKPATVQNKQPQFLLFRPWRKQSKSNNNSRPLDDHRSKFGSPCKAKSPTPAAESPGH
WRFGCSPWRINPIKIGTGRRV