; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Csor.00g219210 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g219210
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionTranscription factor IIIA
Genome locationCsor_Chr04:6804388..6806607
RNA-Seq ExpressionCsor.00g219210
SyntenyCsor.00g219210
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601122.1 Transcription factor IIIA, partial [Cucurbita argyrosperma subsp. sororia]1.44e-95100Show/hide
Query:  MQMKHPWDGMGDGFITVRSPRCMVDSLEGRREQPSNTAESSVGDVAISAITVPSSLLLPSVVAVAAAWWHSSHSIFLTHVPKMESGKHNDGGGDKTINGK
        MQMKHPWDGMGDGFITVRSPRCMVDSLEGRREQPSNTAESSVGDVAISAITVPSSLLLPSVVAVAAAWWHSSHSIFLTHVPKMESGKHNDGGGDKTINGK
Subjt:  MQMKHPWDGMGDGFITVRSPRCMVDSLEGRREQPSNTAESSVGDVAISAITVPSSLLLPSVVAVAAAWWHSSHSIFLTHVPKMESGKHNDGGGDKTINGK

Query:  SNICQECGAEFKKPAYLKQHMQSHSLEEQLLKYIEIM
        SNICQECGAEFKKPAYLKQHMQSHSLEEQLLKYIEIM
Subjt:  SNICQECGAEFKKPAYLKQHMQSHSLEEQLLKYIEIM
KAG7031920.1 Transcription factor IIIA, partial [Cucurbita argyrosperma subsp. argyrosperma]2.89e-63100Show/hide
Query:  LEGRREQPSNTAESSVGDVAISAITVPSSLLLPSVVAVAAAWWHSSHSIFLTHVPKMESGKHNDGGGDKTINGKSNICQECGAEFKKPAYLKQHMQSHSL
        LEGRREQPSNTAESSVGDVAISAITVPSSLLLPSVVAVAAAWWHSSHSIFLTHVPKMESGKHNDGGGDKTINGKSNICQECGAEFKKPAYLKQHMQSHSL
Subjt:  LEGRREQPSNTAESSVGDVAISAITVPSSLLLPSVVAVAAAWWHSSHSIFLTHVPKMESGKHNDGGGDKTINGKSNICQECGAEFKKPAYLKQHMQSHSL

Query:  E
        E
Subjt:  E
XP_022957350.1 transcription factor IIIA isoform X1 [Cucurbita moschata]2.54e-1997.78Show/hide
Query:  MESGKHNDGGGDKTINGKSNICQECGAEFKKPAYLKQHMQSHSLE
        MESGKHNDGG DKTINGKSNICQECGAEFKKPAYLKQHMQSHSLE
Subjt:  MESGKHNDGGGDKTINGKSNICQECGAEFKKPAYLKQHMQSHSLE
XP_022988268.1 transcription factor IIIA isoform X1 [Cucurbita maxima]3.63e-1993.33Show/hide
Query:  MESGKHNDGGGDKTINGKSNICQECGAEFKKPAYLKQHMQSHSLE
        MESGKHND GGD+T NGKSNICQECGAEFKKPAYLKQHMQSHSLE
Subjt:  MESGKHNDGGGDKTINGKSNICQECGAEFKKPAYLKQHMQSHSLE
XP_023526833.1 transcription factor IIIA isoform X1 [Cucurbita pepo subsp. pepo]3.58e-1993.33Show/hide
Query:  MESGKHNDGGGDKTINGKSNICQECGAEFKKPAYLKQHMQSHSLE
        MESGKHND GGDKT NGKSNICQECGAEF+KPAYLKQHMQSHSLE
Subjt:  MESGKHNDGGGDKTINGKSNICQECGAEFKKPAYLKQHMQSHSLE
TrEMBL top hitse value%identityAlignment
A0A0A0KV54 Uncharacterized protein6.22e-1575Show/hide
Query:  VPKMESGKHNDGGGDKTINGKSNICQECGAEFKKPAYLKQHMQSHSLE
        + +ME GKHND G DKT +GK NICQ+CGA F+KPAYLKQHMQSHSLE
Subjt:  VPKMESGKHNDGGGDKTINGKSNICQECGAEFKKPAYLKQHMQSHSLE
A0A1S3BH74 transcription factor IIIA2.30e-1377.78Show/hide
Query:  MESGKHNDGGGDKTINGKSNICQECGAEFKKPAYLKQHMQSHSLE
        ME  KHND G DKT  GK NICQ+CGA F+KPAYLKQHMQSHSLE
Subjt:  MESGKHNDGGGDKTINGKSNICQECGAEFKKPAYLKQHMQSHSLE
A0A5A7SY16 Transcription factor IIIA2.04e-1376.09Show/hide
Query:  KMESGKHNDGGGDKTINGKSNICQECGAEFKKPAYLKQHMQSHSLE
        +ME  KHND G DKT  GK NICQ+CGA F+KPAYLKQHMQSHSLE
Subjt:  KMESGKHNDGGGDKTINGKSNICQECGAEFKKPAYLKQHMQSHSLE
A0A6J1H0A5 transcription factor IIIA isoform X11.23e-1997.78Show/hide
Query:  MESGKHNDGGGDKTINGKSNICQECGAEFKKPAYLKQHMQSHSLE
        MESGKHNDGG DKTINGKSNICQECGAEFKKPAYLKQHMQSHSLE
Subjt:  MESGKHNDGGGDKTINGKSNICQECGAEFKKPAYLKQHMQSHSLE
A0A6J1JLR2 transcription factor IIIA isoform X11.76e-1993.33Show/hide
Query:  MESGKHNDGGGDKTINGKSNICQECGAEFKKPAYLKQHMQSHSLE
        MESGKHND GGD+T NGKSNICQECGAEFKKPAYLKQHMQSHSLE
Subjt:  MESGKHNDGGGDKTINGKSNICQECGAEFKKPAYLKQHMQSHSLE
SwissProt top hitse value%identityAlignment
Q84MZ4 Transcription factor IIIA4.3e-0745.61Show/hide
Query:  HVPKMESGKHNDGGGDKTINGKSNICQECGAEFKKPAYLKQHMQSHSLEEQLLKYIE
        H  ++E  + ++       +  ++ CQECGAEFKKPA+LKQHMQSHSLE     Y++
Subjt:  HVPKMESGKHNDGGGDKTINGKSNICQECGAEFKKPAYLKQHMQSHSLEEQLLKYIE
Arabidopsis top hitse value%identityAlignment
AT1G72050.2 transcription factor IIIA3.1e-0845.61Show/hide
Query:  HVPKMESGKHNDGGGDKTINGKSNICQECGAEFKKPAYLKQHMQSHSLEEQLLKYIE
        H  ++E  + ++       +  ++ CQECGAEFKKPA+LKQHMQSHSLE     Y++
Subjt:  HVPKMESGKHNDGGGDKTINGKSNICQECGAEFKKPAYLKQHMQSHSLEEQLLKYIE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAATGAAACATCCTTGGGACGGTATGGGAGACGGGTTTATTACCGTTCGTAGTCCGAGATGTATGGTGGATAGTTTGGAGGGAAGACGAGAGCAGCCGAGCAACAC
AGCTGAATCCTCAGTGGGGGACGTAGCTATTTCTGCAATTACTGTACCTTCGAGCCTCCTTCTTCCTTCCGTCGTTGCCGTCGCAGCTGCTTGGTGGCATTCCAGCCACT
CAATCTTTCTGACGCACGTCCCGAAGATGGAGAGCGGGAAACATAATGATGGAGGAGGAGATAAGACAATAAACGGAAAATCCAATATCTGTCAGGAATGTGGCGCTGAG
TTCAAAAAACCTGCTTACTTGAAGCAACATATGCAAAGCCATTCGCTTGAGGAACAACTCCTTAAATATATTGAAATAATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAATGAAACATCCTTGGGACGGTATGGGAGACGGGTTTATTACCGTTCGTAGTCCGAGATGTATGGTGGATAGTTTGGAGGGAAGACGAGAGCAGCCGAGCAACAC
AGCTGAATCCTCAGTGGGGGACGTAGCTATTTCTGCAATTACTGTACCTTCGAGCCTCCTTCTTCCTTCCGTCGTTGCCGTCGCAGCTGCTTGGTGGCATTCCAGCCACT
CAATCTTTCTGACGCACGTCCCGAAGATGGAGAGCGGGAAACATAATGATGGAGGAGGAGATAAGACAATAAACGGAAAATCCAATATCTGTCAGGAATGTGGCGCTGAG
TTCAAAAAACCTGCTTACTTGAAGCAACATATGCAAAGCCATTCGCTTGAGGAACAACTCCTTAAATATATTGAAATAATGTGA
Protein sequenceShow/hide protein sequence
MQMKHPWDGMGDGFITVRSPRCMVDSLEGRREQPSNTAESSVGDVAISAITVPSSLLLPSVVAVAAAWWHSSHSIFLTHVPKMESGKHNDGGGDKTINGKSNICQECGAE
FKKPAYLKQHMQSHSLEEQLLKYIEIM