CuGenDBv2

Gene ID	Csor.00g219640
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	ferredoxin-thioredoxin reductase, variable chain
Genome location	Csor_Chr04:6600478..6601011
RNA-Seq Expression	Csor.00g219640
Synteny	Csor.00g219640
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0016310 - phosphorylation (biological process) GO:0030148 - sphingolipid biosynthetic process (biological process) GO:0003951 - NAD+ kinase activity (molecular function) GO:0017050 - D-erythro-sphingosine kinase activity (molecular function)
InterPro domains	IPR004207 - Ferredoxin thioredoxin reductase, alpha chain IPR008990 - Electron transport accessory-like domain superfamily IPR044166 - Ferredoxin-thioredoxin reductase, variable chain

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6601079.1 hypothetical protein SDJN03_06312, partial [Cucurbita argyrosperma subsp. sororia]

3.11e-114

100

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Query:  MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAAR
        MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAAR
Subjt:  MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAAR

Query:  IGARVRVKVPLKLYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV
        IGARVRVKVPLKLYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV
Subjt:  IGARVRVKVPLKLYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV

KAG7031885.1 hypothetical protein SDJN02_05926, partial [Cucurbita argyrosperma subsp. argyrosperma]

8.91e-114

99.44

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Query:  MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAAR
        MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAAR
Subjt:  MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAAR

Query:  IGARVRVKVPLKLYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV
        IGARVRVKVPLK+YHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV
Subjt:  IGARVRVKVPLKLYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV

XP_022957590.1 ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like [Cucurbita moschata]

3.63e-113

98.31

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Query:  MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAAR
        MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCS+TRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAAR
Subjt:  MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAAR

Query:  IGARVRVKVPLKLYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV
        IGARVRVKVPLK+YHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKF+AHLKEEEFEYV
Subjt:  IGARVRVKVPLKLYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV

XP_022999561.1 ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like [Cucurbita maxima]

2.86e-110

96.61

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Query:  MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAAR
        MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYS SVSSLSSVVVNPFNCS+TRGRRFFSEVTVKSDSGTLSSAAAVSAA TSLSEDETDEAAAAR
Subjt:  MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAAR

Query:  IGARVRVKVPLKLYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV
        IGARVRVKVPL +YHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKF+AHLKEEEFEYV
Subjt:  IGARVRVKVPLKLYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV

XP_023549490.1 ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like [Cucurbita pepo subsp. pepo]

2.98e-112

97.74

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Query:  MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAAR
        MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCS+ RGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAAR
Subjt:  MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAAR

Query:  IGARVRVKVPLKLYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV
        IGARVRVKVPLK+YHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKF+AHLKEEEFEYV
Subjt:  IGARVRVKVPLKLYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KV36 FeThRed_A domain-containing protein

1.13e-94

83.98

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Query:  MITMANSIGVIPTPAPT----AARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEA
        MI++ANSIGVIP+PAP+    AAR ACSMTVFS+ D KSS+S SV SLSS+VVNPFNCS+ RGRR FSEV V+SDSGT SSA AVSAATTSLSE+ETDEA
Subjt:  MITMANSIGVIPTPAPT----AARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEA

Query:  AAARIGARVRVKVPLKLYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV
        AAARIGARVRVKVPLK+YHVAKLP+A+LEGMEGV+KDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKF+AHLKEEEFEYV
Subjt:  AAARIGARVRVKVPLKLYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV

A0A1S3BEI2 ferredoxin-thioredoxin reductase, variable chain

1.31e-93

82.87

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Query:  MITMANSIGVIPTPAPT----AARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEA
        MI +ANSIG++P P P+    AAR ACSMTVFS++D +SS+S SV SLSSVVVNPFNCS+ RGRR FSEV+V+SDSGT SSA AVSAATTSLSE+ETDEA
Subjt:  MITMANSIGVIPTPAPT----AARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEA

Query:  AAARIGARVRVKVPLKLYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV
        AAARIGARVRVKVPLK+YHVAKLPEA+LEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPP+KF+AHLKEEEFEYV
Subjt:  AAARIGARVRVKVPLKLYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV

A0A6J1CCI1 ferredoxin-thioredoxin reductase, variable chain

6.76e-91

82.68

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Query:  MITMANSIGVIP--TPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAA
        MI +A+SIGVI    PAP AARPACSM VFSS D KSSYS S  SLSSVVVNPFNCS+ RGRR  SEVTV+SDSGT SSA AVSAATTSLS +ETDEAAA
Subjt:  MITMANSIGVIP--TPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAA

Query:  ARIGARVRVKVPLKLYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV
        ARIGARVRV VPLK+YHVAKLPE D+ GMEGV+KDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHL+EEEFEY+
Subjt:  ARIGARVRVKVPLKLYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV

A0A6J1H0Z6 ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like

1.76e-113

98.31

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Query:  MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAAR
        MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCS+TRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAAR
Subjt:  MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAAR

Query:  IGARVRVKVPLKLYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV
        IGARVRVKVPLK+YHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKF+AHLKEEEFEYV
Subjt:  IGARVRVKVPLKLYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV

A0A6J1KDF2 ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like

1.38e-110

96.61

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Query:  MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAAR
        MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYS SVSSLSSVVVNPFNCS+TRGRRFFSEVTVKSDSGTLSSAAAVSAA TSLSEDETDEAAAAR
Subjt:  MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAAR

Query:  IGARVRVKVPLKLYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV
        IGARVRVKVPL +YHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKF+AHLKEEEFEYV
Subjt:  IGARVRVKVPLKLYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV

SwissProt top hits

e value

%identity

Alignment

P38365 Ferredoxin-thioredoxin reductase, variable chain, chloroplastic

2.0e-17

36.36

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Query:  MANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGR-RFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAARIG
        M   + V+ +    +   A +        F S  + S +  S++       + TR R     EV +KSDS T       S++++   EDE  +    ++G
Subjt:  MANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGR-RFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAARIG

Query:  ARVRVKVPLKLYHVAKLPEADL-EGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV
         +V+VK PLK+YHV KLPE +L   M GV+K YV  WKGK +S N P+KVE+ + V  R  VK + HLKEEEFE +
Subjt:  ARVRVKVPLKLYHVAKLPEADL-EGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV

P80680 Ferredoxin-thioredoxin reductase, variable chain

6.0e-25

63.53

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Query:  DEAAAARIGARVRVKVPLKLYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRP-PVKFLAHLKEEEFEYV
        + AAA +IG RVRV  PL++YHV K P+ D++GMEGV+K YV VWKGKRV+AN P+KVEF + VEG+P PV+F AHL+E+EFE+V
Subjt:  DEAAAARIGARVRVKVPLKLYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRP-PVKFLAHLKEEEFEYV

Arabidopsis top hits

e value

%identity

Alignment

AT5G08410.1 ferredoxin/thioredoxin reductase subunit A (variable subunit) 2

4.1e-29

44.32

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Query:  MANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGR--------RFFSEVTVKSDSGTLSSAAAVSAATTSLS---EDE
        M NS  + P     A RP  S     +     S   S++S SS +  P + S + GR        R   + T++ D    S+A+  + A  S S   E E
Subjt:  MANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGR--------RFFSEVTVKSDSGTLSSAAAVSAATTSLS---EDE

Query:  TDEAAAARIGARVRVKVPLKLYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV
         DE A  +IGARVRV VPLK+YHV ++PE +L GMEG +KDYV +WKGK++SANLP+KV+FV  +EGR PVKF  HLKE+EFE +
Subjt:  TDEAAAARIGARVRVKVPLKLYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV

AT5G23440.1 ferredoxin/thioredoxin reductase subunit A (variable subunit) 1

3.1e-29

42.93

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Query:  MANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGR------RFFSEVTVKSDSGTLSSAAAVSA----ATTSLSEDET
        M++ I + P  A    RP+ S    S++   ++ +P   +L S +V P +   ++ +      R  S  T++ D   + SA +++A    +++  SE+E 
Subjt:  MANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGR------RFFSEVTVKSDSGTLSSAAAVSA----ATTSLSEDET

Query:  DEAAAARIGARVRVKVPLKLYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV
        +  A A+IG+RVRV  PLK+YHV ++PE DLEGMEG LKDYV VWKGKR+SANLPYK+EF   +EGR  VKF++HLKE+EFE++
Subjt:  DEAAAARIGARVRVKVPLKLYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV

Sequences

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CDS sequence

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ATGATCACTATGGCGAACAGTATCGGCGTGATACCAACGCCGGCGCCCACGGCCGCTCGTCCTGCCTGTTCTATGACGGTATTCTCTAGTACTGATTTCAAATCGTCCTA
TTCCCCGTCCGTGAGTTCTCTATCGTCAGTTGTTGTTAATCCTTTCAACTGCTCGGTTACAAGAGGGAGAAGATTCTTCAGCGAAGTTACTGTCAAATCAGATTCCGGTA
CTTTGTCTTCAGCTGCTGCTGTTTCGGCGGCGACGACGTCATTGTCGGAGGATGAGACGGATGAAGCGGCTGCCGCTAGAATTGGAGCCAGAGTTAGGGTTAAGGTGCCT
TTGAAGTTGTATCATGTTGCTAAGTTACCGGAGGCGGATCTTGAGGGGATGGAAGGAGTGCTGAAGGATTATGTACGTGTTTGGAAGGGGAAGCGTGTATCTGCTAATCT
TCCGTATAAGGTGGAGTTTGTTGTTCCAGTCGAAGGCCGTCCACCGGTCAAATTCCTAGCTCATCTTAAGGAGGAAGAATTTGAATACGTTTAA

mRNA sequence

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Protein sequence

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MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAARIGARVRVKVP
LKLYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV

Csor.00g219640 (gene) of Silver-seed gourd (wild; sororia) v1 genome