; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Csor.00g224680 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g224680
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein isoform 1
Genome locationCsor_Chr10:4638268..4638891
RNA-Seq ExpressionCsor.00g224680
SyntenyCsor.00g224680
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056017.1 DUF4228 domain protein [Cucumis melo var. makuwa]1.11e-11679.25Show/hide
Query:  MGNAMSPCLIPPSIT-NRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHANSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSS
        MGNA+SPCLI  SI+  RHR SAVKL+F+ GPT+ L G+HHFAGEIMFQFPDM+VCHA SFFIGH IPSL+I+D+LL GETYLVLPIDRF+  DVLSTSS
Subjt:  MGNAMSPCLIPPSIT-NRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHANSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSS

Query:  LAAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSP----GGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPC
        LA IGAGN +AEKFS  CPFEYVRG NG+ LIKVMPEFIVRL+SP    GG  GG GGGFLCSTPELKKHYDQLVG++KGQVWSP LETISEYKIRYSPC
Subjt:  LAAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSP----GGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPC

Query:  RFVGFKVKQKEG
        RFVGFK+KQKEG
Subjt:  RFVGFKVKQKEG

KAG6590171.1 hypothetical protein SDJN03_15594, partial [Cucurbita argyrosperma subsp. sororia]2.60e-148100Show/hide
Query:  MGNAMSPCLIPPSITNRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHANSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSL
        MGNAMSPCLIPPSITNRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHANSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSL
Subjt:  MGNAMSPCLIPPSITNRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHANSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSL

Query:  AAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGF
        AAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGF
Subjt:  AAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGF

Query:  KVKQKEG
        KVKQKEG
Subjt:  KVKQKEG

XP_022961145.1 uncharacterized protein LOC111461744 [Cucurbita moschata]1.51e-14799.52Show/hide
Query:  MGNAMSPCLIPPSITNRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHANSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSL
        MGNAMSPCLIPPSITNRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHA+SFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSL
Subjt:  MGNAMSPCLIPPSITNRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHANSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSL

Query:  AAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGF
        AAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGF
Subjt:  AAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGF

Query:  KVKQKEG
        KVKQKEG
Subjt:  KVKQKEG

XP_022988214.1 uncharacterized protein LOC111485518 [Cucurbita maxima]2.05e-14597.58Show/hide
Query:  MGNAMSPCLIPPSITNRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHANSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSL
        MGNA+SPC+IPPSITNRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHA+SFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSL
Subjt:  MGNAMSPCLIPPSITNRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHANSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSL

Query:  AAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGF
        AAIGAGNEAAEKFSSSCPF+YVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGT KGQVWSPSLETISEYKIRYSPCRFVGF
Subjt:  AAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGF

Query:  KVKQKEG
        KVKQKEG
Subjt:  KVKQKEG

XP_023516713.1 uncharacterized protein LOC111780520 [Cucurbita pepo subsp. pepo]1.02e-14598.55Show/hide
Query:  MGNAMSPCLIPPSITNRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHANSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSL
        MGNAMSPCLIPPSIT RHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHA+SFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSL
Subjt:  MGNAMSPCLIPPSITNRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHANSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSL

Query:  AAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGF
        AAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVG 
Subjt:  AAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGF

Query:  KVKQKEG
        KVKQKEG
Subjt:  KVKQKEG

TrEMBL top hitse value%identityAlignment
A0A0A0LZV5 Uncharacterized protein1.71e-11376.89Show/hide
Query:  MGNAMSPCLIPPSITNRHRS-SAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHANSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSS
        MGNA+SPCL+  SI+  HR  S VKL+F++GPT+ LAG HHFAGEIMFQFPDM+VCHA SFFIGH IPSL+I+D+L+AGETYL+LPIDRF+  DVLSTSS
Subjt:  MGNAMSPCLIPPSITNRHRS-SAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHANSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSS

Query:  LAAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPGGAYGGE----GGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPC
        LA IGAGN + EKFS  CPFEYVRG NGK LIKVMPEFIVRL+S     GGE    GGGFLCSTPELKKHYDQLVG++KGQVWSP LETISEYKIRYSPC
Subjt:  LAAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPGGAYGGE----GGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPC

Query:  RFVGFKVKQKEG
        RFVGFK+KQKEG
Subjt:  RFVGFKVKQKEG

A0A1S3BP11 uncharacterized protein LOC1034919835.38e-11779.25Show/hide
Query:  MGNAMSPCLIPPSIT-NRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHANSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSS
        MGNA+SPCLI  SI+  RHR SAVKL+F+ GPT+ L G+HHFAGEIMFQFPDM+VCHA SFFIGH IPSL+I+D+LL GETYLVLPIDRF+  DVLSTSS
Subjt:  MGNAMSPCLIPPSIT-NRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHANSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSS

Query:  LAAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSP----GGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPC
        LA IGAGN +AEKFS  CPFEYVRG NG+ LIKVMPEFIVRL+SP    GG  GG GGGFLCSTPELKKHYDQLVG++KGQVWSP LETISEYKIRYSPC
Subjt:  LAAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSP----GGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPC

Query:  RFVGFKVKQKEG
        RFVGFK+KQKEG
Subjt:  RFVGFKVKQKEG

A0A5A7UN34 DUF4228 domain protein5.38e-11779.25Show/hide
Query:  MGNAMSPCLIPPSIT-NRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHANSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSS
        MGNA+SPCLI  SI+  RHR SAVKL+F+ GPT+ L G+HHFAGEIMFQFPDM+VCHA SFFIGH IPSL+I+D+LL GETYLVLPIDRF+  DVLSTSS
Subjt:  MGNAMSPCLIPPSIT-NRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHANSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSS

Query:  LAAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSP----GGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPC
        LA IGAGN +AEKFS  CPFEYVRG NG+ LIKVMPEFIVRL+SP    GG  GG GGGFLCSTPELKKHYDQLVG++KGQVWSP LETISEYKIRYSPC
Subjt:  LAAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSP----GGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPC

Query:  RFVGFKVKQKEG
        RFVGFK+KQKEG
Subjt:  RFVGFKVKQKEG

A0A6J1HB88 uncharacterized protein LOC1114617447.29e-14899.52Show/hide
Query:  MGNAMSPCLIPPSITNRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHANSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSL
        MGNAMSPCLIPPSITNRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHA+SFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSL
Subjt:  MGNAMSPCLIPPSITNRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHANSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSL

Query:  AAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGF
        AAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGF
Subjt:  AAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGF

Query:  KVKQKEG
        KVKQKEG
Subjt:  KVKQKEG

A0A6J1JKY3 uncharacterized protein LOC1114855189.94e-14697.58Show/hide
Query:  MGNAMSPCLIPPSITNRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHANSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSL
        MGNA+SPC+IPPSITNRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHA+SFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSL
Subjt:  MGNAMSPCLIPPSITNRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHANSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSL

Query:  AAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGF
        AAIGAGNEAAEKFSSSCPF+YVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGT KGQVWSPSLETISEYKIRYSPCRFVGF
Subjt:  AAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGF

Query:  KVKQKEG
        KVKQKEG
Subjt:  KVKQKEG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G28190.1 unknown protein4.3e-1432.32Show/hide
Query:  CLIP-PSITNRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHANSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDV--LSTSSLAAIG
        CL P P  T+      +KL+ S G  ++         E+   FP   +C ++  +IG + P L+  + L  G  Y +LP D F  ND+  L+ ++L    
Subjt:  CLIP-PSITNRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHANSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDV--LSTSSLAAIG

Query:  AGNEAAEKFSSS-CPFEYVRGRNGKAL-IKVMPEFIVRLVSPGGAY-----------GGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYK
         G    +K      PF   +G  G+ L I+V  EF+  L+  G              GGEG G +C+T +LKK Y QLVG  +   W P LETI+E K
Subjt:  AGNEAAEKFSSS-CPFEYVRGRNGKAL-IKVMPEFIVRLVSPGGAY-----------GGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYK

AT5G12340.1 unknown protein5.8e-4345.29Show/hide
Query:  MGNAMSPCLIPPSITNRHRSSAVKLIFSSGPTRILAG-SHHFAGEIMFQFPDMIVCHANSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSS
        MG ++     P  I  R +     + F    T+ L G   H AGEIMF+FPD IVCHA+SF+IG +IP+LA++D L+ G+TY VLPI+RF    +L+TS 
Subjt:  MGNAMSPCLIPPSITNRHRSSAVKLIFSSGPTRILAG-SHHFAGEIMFQFPDMIVCHANSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSS

Query:  LAAIGAGNEAAEKF---------SSSCPFEYVRGRNGKALIKVMPEFIVRLVSPG-------GAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLE
        L+   +  E              SS  PFEY +G NGK LIKV PEFI+ L+              GE    +C++PELKK YDQLVGT +  +WSP+L+
Subjt:  LAAIGAGNEAAEKF---------SSSCPFEYVRGRNGKALIKVMPEFIVRLVSPG-------GAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLE

Query:  TISEYKIRYSPCRFVGFKVKQKE
        TISE+KIR SP RF G   KQ E
Subjt:  TISEYKIRYSPCRFVGFKVKQKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAATGCAATGTCTCCATGTCTTATACCCCCTTCCATTACCAACCGCCACCGCTCCTCCGCCGTGAAGCTCATATTCTCCAGCGGGCCCACCAGAATCCTC
GCCGGAAGCCACCACTTCGCCGGAGAAATAATGTTCCAATTTCCCGACATGATAGTCTGCCACGCTAACTCCTTCTTCATCGGCCACCGAATTCCATCCTTAGCC
ATTGAAGACAAGCTTCTCGCCGGCGAAACCTACTTGGTTCTCCCCATCGACCGATTCTCCTTGAACGACGTTCTCTCAACGTCGTCGCTCGCTGCTATCGGCGCC
GGGAATGAGGCGGCGGAGAAATTCTCTAGTTCGTGTCCGTTTGAGTACGTCCGAGGGCGGAATGGGAAAGCGCTGATTAAGGTCATGCCGGAGTTTATTGTTCGG
TTGGTCTCTCCCGGCGGCGCGTACGGCGGAGAGGGTGGTGGGTTTTTGTGTAGCACGCCGGAGTTGAAGAAGCATTACGATCAACTCGTCGGAACATCGAAGGGG
CAGGTTTGGTCGCCGTCGTTGGAGACTATTTCGGAGTATAAAATTAGGTATTCGCCCTGTAGATTTGTTGGGTTTAAAGTCAAACAAAAGGAAGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAATGCAATGTCTCCATGTCTTATACCCCCTTCCATTACCAACCGCCACCGCTCCTCCGCCGTGAAGCTCATATTCTCCAGCGGGCCCACCAGAATCCTC
GCCGGAAGCCACCACTTCGCCGGAGAAATAATGTTCCAATTTCCCGACATGATAGTCTGCCACGCTAACTCCTTCTTCATCGGCCACCGAATTCCATCCTTAGCC
ATTGAAGACAAGCTTCTCGCCGGCGAAACCTACTTGGTTCTCCCCATCGACCGATTCTCCTTGAACGACGTTCTCTCAACGTCGTCGCTCGCTGCTATCGGCGCC
GGGAATGAGGCGGCGGAGAAATTCTCTAGTTCGTGTCCGTTTGAGTACGTCCGAGGGCGGAATGGGAAAGCGCTGATTAAGGTCATGCCGGAGTTTATTGTTCGG
TTGGTCTCTCCCGGCGGCGCGTACGGCGGAGAGGGTGGTGGGTTTTTGTGTAGCACGCCGGAGTTGAAGAAGCATTACGATCAACTCGTCGGAACATCGAAGGGG
CAGGTTTGGTCGCCGTCGTTGGAGACTATTTCGGAGTATAAAATTAGGTATTCGCCCTGTAGATTTGTTGGGTTTAAAGTCAAACAAAAGGAAGGCTAA
Protein sequenceShow/hide protein sequence
MGNAMSPCLIPPSITNRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHANSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGA
GNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGFKVKQKEG