; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Csor.00g229100 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g229100
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionProtein RER1
Genome locationCsor_Chr20:4187644..4189926
RNA-Seq ExpressionCsor.00g229100
SyntenyCsor.00g229100
Gene Ontology termsGO:0006621 - protein retention in ER lumen (biological process)
GO:0006890 - retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (biological process)
GO:0005783 - endoplasmic reticulum (cellular component)
GO:0030173 - integral component of Golgi membrane (cellular component)
InterPro domainsIPR004932 - Retrieval of early ER protein Rer1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571105.1 Protein RER1B, partial [Cucurbita argyrosperma subsp. sororia]1.30e-84100Show/hide
Query:  MDWNSFCIGNLCIEEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPF
        MDWNSFCIGNLCIEEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPF
Subjt:  MDWNSFCIGNLCIEEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPF

Query:  SLGKQKYGGKKASASSGISNDD
        SLGKQKYGGKKASASSGISNDD
Subjt:  SLGKQKYGGKKASASSGISNDD

XP_022146273.1 protein RER1A-like [Momordica charantia]3.69e-7099.07Show/hide
Query:  EMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYGGKKASA
        EMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQI+HMIKYKYIPFSLGKQKYGGKKASA
Subjt:  EMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYGGKKASA

Query:  SSGISNDD
        SSGISNDD
Subjt:  SSGISNDD

XP_022943556.1 protein RER1A-like [Cucurbita moschata]1.29e-70100Show/hide
Query:  EMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYGGKKASA
        EMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYGGKKASA
Subjt:  EMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYGGKKASA

Query:  SSGISNDD
        SSGISNDD
Subjt:  SSGISNDD

XP_022986614.1 protein RER1A-like [Cucurbita maxima]7.43e-7099.07Show/hide
Query:  EMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYGGKKASA
        EMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFC AFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYGGKKASA
Subjt:  EMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYGGKKASA

Query:  SSGISNDD
        SSGISNDD
Subjt:  SSGISNDD

XP_023513319.1 protein RER1A-like [Cucurbita pepo subsp. pepo]1.06e-6999.07Show/hide
Query:  EMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYGGKKASA
        EMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIP SLGKQKYGGKKASA
Subjt:  EMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYGGKKASA

Query:  SSGISNDD
        SSGISNDD
Subjt:  SSGISNDD

TrEMBL top hitse value%identityAlignment
A0A6J1CY56 Protein RER11.79e-7099.07Show/hide
Query:  EMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYGGKKASA
        EMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQI+HMIKYKYIPFSLGKQKYGGKKASA
Subjt:  EMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYGGKKASA

Query:  SSGISNDD
        SSGISNDD
Subjt:  SSGISNDD

A0A6J1FS15 Protein RER16.24e-71100Show/hide
Query:  EMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYGGKKASA
        EMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYGGKKASA
Subjt:  EMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYGGKKASA

Query:  SSGISNDD
        SSGISNDD
Subjt:  SSGISNDD

A0A6J1G7E1 Protein RER11.98e-6795.37Show/hide
Query:  EMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYGGKKASA
        EMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQI+HMIKYKYIPFSLGKQKYGGKK SA
Subjt:  EMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYGGKKASA

Query:  SSGISNDD
         S ISN+D
Subjt:  SSGISNDD

A0A6J1JGI9 Protein RER13.60e-7099.07Show/hide
Query:  EMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYGGKKASA
        EMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFC AFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYGGKKASA
Subjt:  EMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYGGKKASA

Query:  SSGISNDD
        SSGISNDD
Subjt:  SSGISNDD

A0A6J1L096 Protein RER11.98e-6795.37Show/hide
Query:  EMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYGGKKASA
        EMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQI+HMIKYKYIPFSLGKQKYGGKK SA
Subjt:  EMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYGGKKASA

Query:  SSGISNDD
         S ISN+D
Subjt:  SSGISNDD

SwissProt top hitse value%identityAlignment
O15258 Protein RER13.6e-2965.22Show/hide
Query:  DGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYGGKK
        DGP LPTK ++EF+PFIRRLPEFKFW++ TK   +A V TFF  F+VPVFWPIL+ Y+I+LF +TM+RQI HMIKY+YIPF+ GK++Y GK+
Subjt:  DGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYGGKK

O48670 Protein RER1A3.2e-4689.8Show/hide
Query:  VSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYGGKKASAS
        VSDGP LPT+GSDEFKPFIRRLPEFKFWYS TKAFCIAF+MTFFS+FDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFS GKQKYGG+ +S S
Subjt:  VSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYGGKKASAS

O48671 Protein RER1B2.2e-4786.41Show/hide
Query:  EMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYGGKKASA
        E+EVSDG  LPT+GSDEFKPFIRRLPEFKFWYS TKAFCIAF+MTFFS+FDVPVFWPILLCYW+VLFVLTMRRQIAHMIK+KYIPFS+GKQKY G+K+SA
Subjt:  EMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYGGKKASA

Query:  SSG
        +SG
Subjt:  SSG

Q9ZPV7 Protein RER1D5.5e-3067.78Show/hide
Query:  EMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGK
        E+E  D   LP   SDE+KPF+RRLPEFKFWY+ TKAF +AFVMTFFS  DVPVFWPILLCYW+VL+ LTM+R I HM KY+Y PF + K
Subjt:  EMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGK

Q9ZWI7 Protein RER1C7.0e-3363.73Show/hide
Query:  EMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYGGKKASA
        E  ++ G  LPT+ SDE++PF+RRLPEFKFW S  +AF I F+MTFF +FDVPVFWPILL YW++LF LTMR+QI HMIKY+Y+PFS GK++YG K A  
Subjt:  EMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYGGKKASA

Query:  SS
         S
Subjt:  SS

Arabidopsis top hitse value%identityAlignment
AT2G18240.1 Rer1 family protein3.9e-3167.78Show/hide
Query:  EMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGK
        E+E  D   LP   SDE+KPF+RRLPEFKFWY+ TKAF +AFVMTFFS  DVPVFWPILLCYW+VL+ LTM+R I HM KY+Y PF + K
Subjt:  EMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGK

AT2G21600.1 endoplasmatic reticulum retrieval protein 1B1.6e-4886.41Show/hide
Query:  EMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYGGKKASA
        E+EVSDG  LPT+GSDEFKPFIRRLPEFKFWYS TKAFCIAF+MTFFS+FDVPVFWPILLCYW+VLFVLTMRRQIAHMIK+KYIPFS+GKQKY G+K+SA
Subjt:  EMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYGGKKASA

Query:  SSG
        +SG
Subjt:  SSG

AT2G23310.1 Rer1 family protein5.0e-3463.73Show/hide
Query:  EMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYGGKKASA
        E  ++ G  LPT+ SDE++PF+RRLPEFKFW S  +AF I F+MTFF +FDVPVFWPILL YW++LF LTMR+QI HMIKY+Y+PFS GK++YG K A  
Subjt:  EMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYGGKKASA

Query:  SS
         S
Subjt:  SS

AT2G23310.2 Rer1 family protein5.5e-3364.71Show/hide
Query:  EMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYGGKKASA
        E  ++ G  LPT+ SDE++PF+RRLPEFKFW S  +AF I F+MTFF +FDVPVFWPILL YW++LF LTMR+QI HMIKY+Y+PFS GK KYG K A  
Subjt:  EMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYGGKKASA

Query:  SS
         S
Subjt:  SS

AT4G39220.1 Rer1 family protein2.3e-4789.8Show/hide
Query:  VSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYGGKKASAS
        VSDGP LPT+GSDEFKPFIRRLPEFKFWYS TKAFCIAF+MTFFS+FDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFS GKQKYGG+ +S S
Subjt:  VSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYGGKKASAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTGGAACTCTTTTTGTATTGGCAATTTATGCATTGAGGAGATGGAAGTTTCAGATGGACCATTGCTGCCTACTAAAGGTTCAGATGAATTCAAGCCGTTCATTCG
CCGACTTCCAGAATTTAAGTTCTGGTACTCATTTACAAAGGCCTTTTGCATTGCCTTTGTAATGACCTTCTTTTCCATCTTTGATGTTCCTGTCTTCTGGCCCATTTTAC
TTTGTTACTGGATTGTTCTTTTTGTCCTGACAATGAGGCGTCAGATTGCACATATGATCAAGTACAAATACATACCATTTAGTCTTGGAAAGCAGAAGTATGGTGGCAAA
AAAGCTTCTGCAAGTAGCGGTATCTCGAACGACGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTGGAACTCTTTTTGTATTGGCAATTTATGCATTGAGGAGATGGAAGTTTCAGATGGACCATTGCTGCCTACTAAAGGTTCAGATGAATTCAAGCCGTTCATTCG
CCGACTTCCAGAATTTAAGTTCTGGTACTCATTTACAAAGGCCTTTTGCATTGCCTTTGTAATGACCTTCTTTTCCATCTTTGATGTTCCTGTCTTCTGGCCCATTTTAC
TTTGTTACTGGATTGTTCTTTTTGTCCTGACAATGAGGCGTCAGATTGCACATATGATCAAGTACAAATACATACCATTTAGTCTTGGAAAGCAGAAGTATGGTGGCAAA
AAAGCTTCTGCAAGTAGCGGTATCTCGAACGACGATTGA
Protein sequenceShow/hide protein sequence
MDWNSFCIGNLCIEEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYGGK
KASASSGISNDD