; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Csor.00g232020 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g232020
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionEmbryo defective 1381 isoform 1
Genome locationCsor_Chr11:14538902..14541476
RNA-Seq ExpressionCsor.00g232020
SyntenyCsor.00g232020
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061652.1 Embryo defective 1381 isoform 1 [Cucumis melo var. makuwa]5.00e-1760.27Show/hide
Query:  SKEAIKVRQGWRANAIA------GFSPSLAHSCTDWPCLLIELLSQATEIDHFQ---YLDRARKLMNGLVSED
        +KE I+++QGWRANAIA      GFS SLAHSCTDWPCLLIELLSQA EI+HFQ    ++    L N ++S+D
Subjt:  SKEAIKVRQGWRANAIA------GFSPSLAHSCTDWPCLLIELLSQATEIDHFQ---YLDRARKLMNGLVSED
KAG6589273.1 hypothetical protein SDJN03_17838, partial [Cucurbita argyrosperma subsp. sororia]4.12e-96100Show/hide
Query:  MGLSYWAVWAEKVFVLRSEPSSVMWIKQFLLYLLVVMPPRLFGSLTLPSKEAIKVRQGWRANAIAGFSPSLAHSCTDWPCLLIELLSQATEIDHFQYLDR
        MGLSYWAVWAEKVFVLRSEPSSVMWIKQFLLYLLVVMPPRLFGSLTLPSKEAIKVRQGWRANAIAGFSPSLAHSCTDWPCLLIELLSQATEIDHFQYLDR
Subjt:  MGLSYWAVWAEKVFVLRSEPSSVMWIKQFLLYLLVVMPPRLFGSLTLPSKEAIKVRQGWRANAIAGFSPSLAHSCTDWPCLLIELLSQATEIDHFQYLDR

Query:  ARKLMNGLVSEDRLCFDSADGFVNSLVDVEFGGRVDSGT
        ARKLMNGLVSEDRLCFDSADGFVNSLVDVEFGGRVDSGT
Subjt:  ARKLMNGLVSEDRLCFDSADGFVNSLVDVEFGGRVDSGT
XP_008449481.2 PREDICTED: uncharacterized protein LOC103491354, partial [Cucumis melo]4.81e-1760.27Show/hide
Query:  SKEAIKVRQGWRANAIA------GFSPSLAHSCTDWPCLLIELLSQATEIDHFQ---YLDRARKLMNGLVSED
        +KE I+++QGWRANAIA      GFS SLAHSCTDWPCLLIELLSQA EI+HFQ    ++    L N ++S+D
Subjt:  SKEAIKVRQGWRANAIA------GFSPSLAHSCTDWPCLLIELLSQATEIDHFQ---YLDRARKLMNGLVSED
XP_022148028.1 uncharacterized protein LOC111016816 [Momordica charantia]2.46e-1965.75Show/hide
Query:  SKEAIKVRQGWRANAIA------GFSPSLAHSCTDWPCLLIELLSQATEIDHFQ---YLDRARKLMNGLVSED
        +KE IK++QGWRANAIA      GFSPSLAHSCTDWPCLLIELLSQA EIDHFQ    ++    L N  VS+D
Subjt:  SKEAIKVRQGWRANAIA------GFSPSLAHSCTDWPCLLIELLSQATEIDHFQ---YLDRARKLMNGLVSED
XP_038887701.1 uncharacterized protein LOC120077765 [Benincasa hispida]1.59e-1864.38Show/hide
Query:  SKEAIKVRQGWRANAIA------GFSPSLAHSCTDWPCLLIELLSQATEIDHFQ---YLDRARKLMNGLVSED
        +KE IK++QGWRANAIA      GFSPSLAHSCTDWPCLLIELLSQA EIDHFQ    ++    L N  +S+D
Subjt:  SKEAIKVRQGWRANAIA------GFSPSLAHSCTDWPCLLIELLSQATEIDHFQ---YLDRARKLMNGLVSED
TrEMBL top hitse value%identityAlignment
A0A1S3BM46 uncharacterized protein LOC1034913542.33e-1760.27Show/hide
Query:  SKEAIKVRQGWRANAIA------GFSPSLAHSCTDWPCLLIELLSQATEIDHFQ---YLDRARKLMNGLVSED
        +KE I+++QGWRANAIA      GFS SLAHSCTDWPCLLIELLSQA EI+HFQ    ++    L N ++S+D
Subjt:  SKEAIKVRQGWRANAIA------GFSPSLAHSCTDWPCLLIELLSQATEIDHFQ---YLDRARKLMNGLVSED
A0A2N9ESZ4 Uncharacterized protein2.21e-1761.64Show/hide
Query:  SKEAIKVRQGWRANAIA------GFSPSLAHSCTDWPCLLIELLSQATEIDHFQ---YLDRARKLMNGLVSED
        +KE IKV+QGWRANAIA      GFS SLAHSCTDWPCLL+ELLSQA EIDHFQ    ++    L N  +++D
Subjt:  SKEAIKVRQGWRANAIA------GFSPSLAHSCTDWPCLLIELLSQATEIDHFQ---YLDRARKLMNGLVSED
A0A5D3C3G7 Embryo defective 1381 isoform 12.42e-1760.27Show/hide
Query:  SKEAIKVRQGWRANAIA------GFSPSLAHSCTDWPCLLIELLSQATEIDHFQ---YLDRARKLMNGLVSED
        +KE I+++QGWRANAIA      GFS SLAHSCTDWPCLLIELLSQA EI+HFQ    ++    L N ++S+D
Subjt:  SKEAIKVRQGWRANAIA------GFSPSLAHSCTDWPCLLIELLSQATEIDHFQ---YLDRARKLMNGLVSED
A0A6A6KY01 Uncharacterized protein1.09e-1653.41Show/hide
Query:  SKEAIKVRQGWRANAIA------GFSPSLAHSCTDWPCLLIELLSQATEIDHFQ---YLDRARKLMNGLVSEDRLCFDSADGFVNSLV
        +KE IKV+QGWRANAIA      GFS SLA+SCTDWPCLL+ELLSQA EID+FQ    ++    L N ++++D +   SA  + +SL+
Subjt:  SKEAIKVRQGWRANAIA------GFSPSLAHSCTDWPCLLIELLSQATEIDHFQ---YLDRARKLMNGLVSEDRLCFDSADGFVNSLV
A0A6J1D2X8 uncharacterized protein LOC1110168161.19e-1965.75Show/hide
Query:  SKEAIKVRQGWRANAIA------GFSPSLAHSCTDWPCLLIELLSQATEIDHFQ---YLDRARKLMNGLVSED
        +KE IK++QGWRANAIA      GFSPSLAHSCTDWPCLLIELLSQA EIDHFQ    ++    L N  VS+D
Subjt:  SKEAIKVRQGWRANAIA------GFSPSLAHSCTDWPCLLIELLSQATEIDHFQ---YLDRARKLMNGLVSED
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G31340.1 embryo defective 13815.5e-1364.81Show/hide
Query:  SKEAIKVRQGWRANAIA------GFSPSLAHSCTDWPCLLIELLSQATEIDHFQ
        +KE IKV QGW+ANAIA      GFS +LA+SCTDWP L++ELLSQA EI  FQ
Subjt:  SKEAIKVRQGWRANAIA------GFSPSLAHSCTDWPCLLIELLSQATEIDHFQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCTTTCTTATTGGGCCGTCTGGGCCGAAAAAGTGTTTGTCTTGCGCAGCGAGCCAAGCTCGGTAATGTGGATCAAGCAGTTCTTGCTCTATCTGCTCGTT
GTAATGCCGCCGAGGTTGTTCGGGTCCTTAACGCTGCCCTCCAAGGAGGCGATCAAAGTTCGGCAAGGCTGGCGAGCTAATGCCATTGCTGGTTTTTCGCCGTCA
TTGGCACATTCCTGTACCGATTGGCCTTGTTTGCTGATAGAGTTACTGTCACAAGCTACTGAAATTGATCATTTTCAGTACTTGGACAGGGCAAGGAAACTAATG
AATGGATTGGTTTCAGAAGATAGATTATGCTTTGATTCAGCTGATGGATTTGTGAATTCTCTTGTGGATGTGGAATTTGGGGGACGGGTGGATTCAGGAACGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCCTTTCTTATTGGGCCGTCTGGGCCGAAAAAGTGTTTGTCTTGCGCAGCGAGCCAAGCTCGGTAATGTGGATCAAGCAGTTCTTGCTCTATCTGCTCGTT
GTAATGCCGCCGAGGTTGTTCGGGTCCTTAACGCTGCCCTCCAAGGAGGCGATCAAAGTTCGGCAAGGCTGGCGAGCTAATGCCATTGCTGGTTTTTCGCCGTCA
TTGGCACATTCCTGTACCGATTGGCCTTGTTTGCTGATAGAGTTACTGTCACAAGCTACTGAAATTGATCATTTTCAGTACTTGGACAGGGCAAGGAAACTAATG
AATGGATTGGTTTCAGAAGATAGATTATGCTTTGATTCAGCTGATGGATTTGTGAATTCTCTTGTGGATGTGGAATTTGGGGGACGGGTGGATTCAGGAACGTGA
Protein sequenceShow/hide protein sequence
MGLSYWAVWAEKVFVLRSEPSSVMWIKQFLLYLLVVMPPRLFGSLTLPSKEAIKVRQGWRANAIAGFSPSLAHSCTDWPCLLIELLSQATEIDHFQYLDRARKLM
NGLVSEDRLCFDSADGFVNSLVDVEFGGRVDSGT