; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Csor.00g233000 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g233000
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUbiquitin-like domain-containing protein
Genome locationCsor_Chr11:14079384..14079698
RNA-Seq ExpressionCsor.00g233000
SyntenyCsor.00g233000
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589175.1 hypothetical protein SDJN03_17740, partial [Cucurbita argyrosperma subsp. sororia]5.10e-69100Show/hide
Query:  MKLVAENLTGSLFYVEVDDGATVLDLRTEISSQQSLPSDRLLFVPDHDRGRLISAADDGTSLVDFGLRDGSLIYVFFCPLDDEGVDDLDARQLFFNCPDL
        MKLVAENLTGSLFYVEVDDGATVLDLRTEISSQQSLPSDRLLFVPDHDRGRLISAADDGTSLVDFGLRDGSLIYVFFCPLDDEGVDDLDARQLFFNCPDL
Subjt:  MKLVAENLTGSLFYVEVDDGATVLDLRTEISSQQSLPSDRLLFVPDHDRGRLISAADDGTSLVDFGLRDGSLIYVFFCPLDDEGVDDLDARQLFFNCPDL

Query:  LLFQ
        LLFQ
Subjt:  LLFQ

KGN43536.1 hypothetical protein Csa_020453 [Cucumis sativus]2.49e-3864.49Show/hide
Query:  MKLVAENLTGSLFYVEVDDGATVLDLRTEISS---QQSLPSDRLLFVPDHDRGRLISAADDGTSLVDFGLRDGSLIYVFFCPLDDEGVDDLDARQLFF-N
        MKLV +NLTGSLF+VEV+D ATV DLRT+I++   Q +LPS RL+F+PDH+  RLIS  DDG SLVDFGLRDGS IY+FF PL D+  DD++AR+ FF +
Subjt:  MKLVAENLTGSLFYVEVDDGATVLDLRTEISS---QQSLPSDRLLFVPDHDRGRLISAADDGTSLVDFGLRDGSLIYVFFCPLDDEGVDDLDARQLFF-N

Query:  CPDLLLF
          DLLLF
Subjt:  CPDLLLF

XP_022136124.1 uncharacterized protein LOC111007894 [Momordica charantia]8.31e-3054.78Show/hide
Query:  MKLVAENLTGSLFYVEVDDGATVLDLRTEISSQQS--LPSDRLLFVPDHDRGRLISAADDGTSLVDFGLRDGSLIYVFFCPLD-----DEGVDDLD----
        MKL  ENLTGSLF+++V D ATV DL+ EIS+  +  LPSDRL+F+ D + GR IS  DDG SLVD G++DGS IY+FF PLD     D G DD D    
Subjt:  MKLVAENLTGSLFYVEVDDGATVLDLRTEISSQQS--LPSDRLLFVPDHDRGRLISAADDGTSLVDFGLRDGSLIYVFFCPLD-----DEGVDDLD----

Query:  ARQLFFNCPDLLLFQ
        +R  FF C ++LLF 
Subjt:  ARQLFFNCPDLLLFQ

XP_022930696.1 uncharacterized protein LOC111437093 [Cucurbita moschata]2.08e-6899.04Show/hide
Query:  MKLVAENLTGSLFYVEVDDGATVLDLRTEISSQQSLPSDRLLFVPDHDRGRLISAADDGTSLVDFGLRDGSLIYVFFCPLDDEGVDDLDARQLFFNCPDL
        MKLVAENLTGSLFYVEVDDGATVLDLRTEISSQQSLPSDRLLFVPDHDRGRLISAADDGTSLVDFGLRDGSLIYVFFCPLD+EGVDDLDARQLFFNCPDL
Subjt:  MKLVAENLTGSLFYVEVDDGATVLDLRTEISSQQSLPSDRLLFVPDHDRGRLISAADDGTSLVDFGLRDGSLIYVFFCPLDDEGVDDLDARQLFFNCPDL

Query:  LLFQ
        LLFQ
Subjt:  LLFQ

XP_022989504.1 uncharacterized protein LOC111486561 [Cucurbita maxima]2.34e-6594.23Show/hide
Query:  MKLVAENLTGSLFYVEVDDGATVLDLRTEISSQQSLPSDRLLFVPDHDRGRLISAADDGTSLVDFGLRDGSLIYVFFCPLDDEGVDDLDARQLFFNCPDL
        MKLVAENLTGSLFYVEVDDGATVLDLRTEISSQQSLPSDRLLFVPDHDRGRLIS ADDG SLVDFGLRDGSLIY+FFCPLDD+G DD+DARQLFFNCPDL
Subjt:  MKLVAENLTGSLFYVEVDDGATVLDLRTEISSQQSLPSDRLLFVPDHDRGRLISAADDGTSLVDFGLRDGSLIYVFFCPLDDEGVDDLDARQLFFNCPDL

Query:  LLFQ
        LLFQ
Subjt:  LLFQ

TrEMBL top hitse value%identityAlignment
A0A0A0K6V6 Ubiquitin-like domain-containing protein1.21e-3864.49Show/hide
Query:  MKLVAENLTGSLFYVEVDDGATVLDLRTEISS---QQSLPSDRLLFVPDHDRGRLISAADDGTSLVDFGLRDGSLIYVFFCPLDDEGVDDLDARQLFF-N
        MKLV +NLTGSLF+VEV+D ATV DLRT+I++   Q +LPS RL+F+PDH+  RLIS  DDG SLVDFGLRDGS IY+FF PL D+  DD++AR+ FF +
Subjt:  MKLVAENLTGSLFYVEVDDGATVLDLRTEISS---QQSLPSDRLLFVPDHDRGRLISAADDGTSLVDFGLRDGSLIYVFFCPLDDEGVDDLDARQLFF-N

Query:  CPDLLLF
          DLLLF
Subjt:  CPDLLLF

A0A6J1C3E5 uncharacterized protein LOC1110078944.02e-3054.78Show/hide
Query:  MKLVAENLTGSLFYVEVDDGATVLDLRTEISSQQS--LPSDRLLFVPDHDRGRLISAADDGTSLVDFGLRDGSLIYVFFCPLD-----DEGVDDLD----
        MKL  ENLTGSLF+++V D ATV DL+ EIS+  +  LPSDRL+F+ D + GR IS  DDG SLVD G++DGS IY+FF PLD     D G DD D    
Subjt:  MKLVAENLTGSLFYVEVDDGATVLDLRTEISSQQS--LPSDRLLFVPDHDRGRLISAADDGTSLVDFGLRDGSLIYVFFCPLD-----DEGVDDLD----

Query:  ARQLFFNCPDLLLFQ
        +R  FF C ++LLF 
Subjt:  ARQLFFNCPDLLLFQ

A0A6J1ERN4 uncharacterized protein LOC1114370931.01e-6899.04Show/hide
Query:  MKLVAENLTGSLFYVEVDDGATVLDLRTEISSQQSLPSDRLLFVPDHDRGRLISAADDGTSLVDFGLRDGSLIYVFFCPLDDEGVDDLDARQLFFNCPDL
        MKLVAENLTGSLFYVEVDDGATVLDLRTEISSQQSLPSDRLLFVPDHDRGRLISAADDGTSLVDFGLRDGSLIYVFFCPLD+EGVDDLDARQLFFNCPDL
Subjt:  MKLVAENLTGSLFYVEVDDGATVLDLRTEISSQQSLPSDRLLFVPDHDRGRLISAADDGTSLVDFGLRDGSLIYVFFCPLDDEGVDDLDARQLFFNCPDL

Query:  LLFQ
        LLFQ
Subjt:  LLFQ

A0A6J1JPI4 uncharacterized protein LOC1114865611.13e-6594.23Show/hide
Query:  MKLVAENLTGSLFYVEVDDGATVLDLRTEISSQQSLPSDRLLFVPDHDRGRLISAADDGTSLVDFGLRDGSLIYVFFCPLDDEGVDDLDARQLFFNCPDL
        MKLVAENLTGSLFYVEVDDGATVLDLRTEISSQQSLPSDRLLFVPDHDRGRLIS ADDG SLVDFGLRDGSLIY+FFCPLDD+G DD+DARQLFFNCPDL
Subjt:  MKLVAENLTGSLFYVEVDDGATVLDLRTEISSQQSLPSDRLLFVPDHDRGRLISAADDGTSLVDFGLRDGSLIYVFFCPLDDEGVDDLDARQLFFNCPDL

Query:  LLFQ
        LLFQ
Subjt:  LLFQ

A0A6P5RKW0 uncharacterized protein LOC1107456953.31e-2653.27Show/hide
Query:  MKLVAENLTGSLFYVEVDDGATVLDLRTEISSQQSLPSDRLLFV-----PDHDRGRLISAADDGTSLVDFGLRDGSLIYVFFCPLDDEGVDDLDARQLFF
        MK+V ENLTG+LFYV+V + ATV DL+ EI +QQ LP DRL+F+      DH R +LI    DG  LVD+G++DGS IY+F  PLDDE  D        F
Subjt:  MKLVAENLTGSLFYVEVDDGATVLDLRTEISSQQSLPSDRLLFV-----PDHDRGRLISAADDGTSLVDFGLRDGSLIYVFFCPLDDEGVDDLDARQLFF

Query:  NCPDLLL
        N PD LL
Subjt:  NCPDLLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G32360.1 Ubiquitin-like superfamily protein2.9e-0634.62Show/hide
Query:  MKLVAENLTGSLFYVEVDDGATVLDLRTEISSQQSLPSDRL-LFVPDHDRGRLISAADDGTSLVDFGLRDGSLIYVFF
        MK+  E +TG+    +V + ATV  ++ +I+ +  LP  RL L + D +  RL+   +D   L D G+ + S IY+FF
Subjt:  MKLVAENLTGSLFYVEVDDGATVLDLRTEISSQQSLPSDRL-LFVPDHDRGRLISAADDGTSLVDFGLRDGSLIYVFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATTGGTGGCCGAGAACTTGACTGGTTCTCTGTTCTACGTTGAGGTTGACGACGGCGCCACCGTTCTTGATCTGAGAACCGAGATCAGTTCCCAGCAGAGCCTCCC
TTCCGACCGTCTCCTCTTCGTTCCCGACCACGACCGTGGCCGTCTCATCTCCGCCGCCGACGACGGAACCTCGCTCGTTGATTTTGGGCTCCGAGATGGGTCGCTGATTT
ACGTCTTTTTCTGTCCACTTGATGACGAGGGTGTGGATGATCTTGATGCTCGTCAGCTGTTCTTTAACTGTCCTGATCTTCTTCTCTTTCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAATTGGTGGCCGAGAACTTGACTGGTTCTCTGTTCTACGTTGAGGTTGACGACGGCGCCACCGTTCTTGATCTGAGAACCGAGATCAGTTCCCAGCAGAGCCTCCC
TTCCGACCGTCTCCTCTTCGTTCCCGACCACGACCGTGGCCGTCTCATCTCCGCCGCCGACGACGGAACCTCGCTCGTTGATTTTGGGCTCCGAGATGGGTCGCTGATTT
ACGTCTTTTTCTGTCCACTTGATGACGAGGGTGTGGATGATCTTGATGCTCGTCAGCTGTTCTTTAACTGTCCTGATCTTCTTCTCTTTCAGTAG
Protein sequenceShow/hide protein sequence
MKLVAENLTGSLFYVEVDDGATVLDLRTEISSQQSLPSDRLLFVPDHDRGRLISAADDGTSLVDFGLRDGSLIYVFFCPLDDEGVDDLDARQLFFNCPDLLLFQ