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Csor.00g255100 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g255100
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Descriptionlate embryogenesis abundant protein 6-like
Genome locationCsor_Chr06:8795577..8796480
RNA-Seq ExpressionCsor.00g255100
SyntenyCsor.00g255100
Gene Ontology termsGO:0009793 - embryo development ending in seed dormancy (biological process)
InterPro domainsIPR005513 - Late embryogenesis abundant protein, LEA_1 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597226.1 Late embryogenesis abundant protein 6, partial [Cucurbita argyrosperma subsp. sororia]4.71e-67100Show/hide
Query:  MQAVKEKLHDMSVLRKAKAEAKAEEKVEKELAKARVEVAHEVRLAKEAEAEMDLHVARAGMIAENEMAMYANNPPTSFVPSAAANISMASGMALDGTPCT
        MQAVKEKLHDMSVLRKAKAEAKAEEKVEKELAKARVEVAHEVRLAKEAEAEMDLHVARAGMIAENEMAMYANNPPTSFVPSAAANISMASGMALDGTPCT
Subjt:  MQAVKEKLHDMSVLRKAKAEAKAEEKVEKELAKARVEVAHEVRLAKEAEAEMDLHVARAGMIAENEMAMYANNPPTSFVPSAAANISMASGMALDGTPCT

Query:  IYMAGTPASKKLL
        IYMAGTPASKKLL
Subjt:  IYMAGTPASKKLL

KAG7028698.1 Late embryogenesis abundant protein 6 [Cucurbita argyrosperma subsp. argyrosperma]3.87e-6699.12Show/hide
Query:  MQAVKEKLHDMSVLRKAKAEAKAEEKVEKELAKARVEVAHEVRLAKEAEAEMDLHVARAGMIAENEMAMYANNPPTSFVPSAAANISMASGMALDGTPCT
        MQAVKEKLHDMSVLRKAKAEAKAEEKVEKELAKARVEVAHEVRLAKEAEAEMDLHVARAGMIAENEMAMYA NPPTSFVPSAAANISMASGMALDGTPCT
Subjt:  MQAVKEKLHDMSVLRKAKAEAKAEEKVEKELAKARVEVAHEVRLAKEAEAEMDLHVARAGMIAENEMAMYANNPPTSFVPSAAANISMASGMALDGTPCT

Query:  IYMAGTPASKKLL
        IYMAGTPASKKLL
Subjt:  IYMAGTPASKKLL

XP_008438228.1 PREDICTED: uncharacterized protein LOC103483397 [Cucumis melo]4.96e-3967.48Show/hide
Query:  MQAVKEKLHDMSVLRKAKAEAKAEEKVEKELAKARVEVAHEVRLAKEAEAEMDLHVARAGMIAENEMAMYANNPPTSFV--------PSAAANISMASGM
        MQAVKEKLHDMSV+RKAKAEAKAEEK EKELAKARVEVAHEVRLA+EAEA MDLHVA+AGM AE EMA YA+    +FV        P  +AN+ +A GM
Subjt:  MQAVKEKLHDMSVLRKAKAEAKAEEKVEKELAKARVEVAHEVRLAKEAEAEMDLHVARAGMIAENEMAMYANNPPTSFV--------PSAAANISMASGM

Query:  ALDGTPCTIYMAG--TPASKKLL
         + G P T+ MAG  +PA+KKLL
Subjt:  ALDGTPCTIYMAG--TPASKKLL

XP_022974150.1 late embryogenesis abundant protein 6-like [Cucurbita maxima]2.79e-5693.58Show/hide
Query:  MSVLRKAKAEAKAEEKVEKELAKARVEVAHEVRLAKEAEAEMDLHVARAGMIAENEMAMYANNPPTSFVPSAAA------NISMASGMALDGTPCTIYMA
        MSVLRKAKAEAKAEEKVEKELAKARVEVAHEVRLAKEAEAEMDLHVARAGMIAENEMA YANNPPTSFVPSAAA      NISMASGMALDGTPCTIYMA
Subjt:  MSVLRKAKAEAKAEEKVEKELAKARVEVAHEVRLAKEAEAEMDLHVARAGMIAENEMAMYANNPPTSFVPSAAA------NISMASGMALDGTPCTIYMA

Query:  GTPASKKLL
        GTPASKKLL
Subjt:  GTPASKKLL

XP_023538811.1 late embryogenesis abundant protein 6-like [Cucurbita pepo subsp. pepo]7.99e-5691.74Show/hide
Query:  MSVLRKAKAEAKAEEKVEKELAKARVEVAHEVRLAKEAEAEMDLHVARAGMIAENEMAMYANNPPTSFVPS------AAANISMASGMALDGTPCTIYMA
        MSVLRKAKAEAKAEEKVEKELAKARVEVAHEVRLAKEAEAEMDLHVARAGMIAENEMAMYANNPPTSFVPS      AAANISMASG+ +DGTPCTIYMA
Subjt:  MSVLRKAKAEAKAEEKVEKELAKARVEVAHEVRLAKEAEAEMDLHVARAGMIAENEMAMYANNPPTSFVPS------AAANISMASGMALDGTPCTIYMA

Query:  GTPASKKLL
        GTPASKKLL
Subjt:  GTPASKKLL

TrEMBL top hitse value%identityAlignment
A0A0A0L6I7 Uncharacterized protein5.02e-3664.46Show/hide
Query:  MQAVKEKLHDMSVLRKAKAEAKAEEKVEKELAKARVEVAHEVRLAKEAEAEMDLHVARAGMIAENEMAMYANNPPTSFVPSAAA------NISMASGMAL
        MQAV+EKLHDMSV+RKAKAEAKAEEK EKELAKARVEVAHEVRLA+EAEA MDLHVA+AGM AE EMA YA+    +FV           ++ +A GM +
Subjt:  MQAVKEKLHDMSVLRKAKAEAKAEEKVEKELAKARVEVAHEVRLAKEAEAEMDLHVARAGMIAENEMAMYANNPPTSFVPSAAA------NISMASGMAL

Query:  DGTPCTIYMAGTPA--SKKLL
         G P T+ MAG P+  +KKLL
Subjt:  DGTPCTIYMAGTPA--SKKLL

A0A1S3AWI7 uncharacterized protein LOC1034833972.40e-3967.48Show/hide
Query:  MQAVKEKLHDMSVLRKAKAEAKAEEKVEKELAKARVEVAHEVRLAKEAEAEMDLHVARAGMIAENEMAMYANNPPTSFV--------PSAAANISMASGM
        MQAVKEKLHDMSV+RKAKAEAKAEEK EKELAKARVEVAHEVRLA+EAEA MDLHVA+AGM AE EMA YA+    +FV        P  +AN+ +A GM
Subjt:  MQAVKEKLHDMSVLRKAKAEAKAEEKVEKELAKARVEVAHEVRLAKEAEAEMDLHVARAGMIAENEMAMYANNPPTSFV--------PSAAANISMASGM

Query:  ALDGTPCTIYMAG--TPASKKLL
         + G P T+ MAG  +PA+KKLL
Subjt:  ALDGTPCTIYMAG--TPASKKLL

A0A5A7U624 Late embryogenesis abundant protein2.40e-3967.48Show/hide
Query:  MQAVKEKLHDMSVLRKAKAEAKAEEKVEKELAKARVEVAHEVRLAKEAEAEMDLHVARAGMIAENEMAMYANNPPTSFV--------PSAAANISMASGM
        MQAVKEKLHDMSV+RKAKAEAKAEEK EKELAKARVEVAHEVRLA+EAEA MDLHVA+AGM AE EMA YA+    +FV        P  +AN+ +A GM
Subjt:  MQAVKEKLHDMSVLRKAKAEAKAEEKVEKELAKARVEVAHEVRLAKEAEAEMDLHVARAGMIAENEMAMYANNPPTSFV--------PSAAANISMASGM

Query:  ALDGTPCTIYMAG--TPASKKLL
         + G P T+ MAG  +PA+KKLL
Subjt:  ALDGTPCTIYMAG--TPASKKLL

A0A6J1CZ67 late embryogenesis abundant protein 6-like3.43e-3566.09Show/hide
Query:  MQAVKEKLHDMSVLRKAKAEAKAEEKVEKELAKARVEVAHEVRLAKEAEAEMDLHVARAGMIAENEMAMYANNPPTSFV-PSAAANISMAS-GMALDGTP
        MQAVK+KLHDMS +RKAKAEAKAEEK EKELAKARVEVAHEVRLA+EAEA MDLHVA+AG  AE EMA YA+  PT+FV P    N++ A   + + G P
Subjt:  MQAVKEKLHDMSVLRKAKAEAKAEEKVEKELAKARVEVAHEVRLAKEAEAEMDLHVARAGMIAENEMAMYANNPPTSFV-PSAAANISMAS-GMALDGTP

Query:  CTIYMAGTPASKKLL
         T+ M GT   KK+L
Subjt:  CTIYMAGTPASKKLL

A0A6J1ID82 late embryogenesis abundant protein 6-like1.35e-5693.58Show/hide
Query:  MSVLRKAKAEAKAEEKVEKELAKARVEVAHEVRLAKEAEAEMDLHVARAGMIAENEMAMYANNPPTSFVPSAAA------NISMASGMALDGTPCTIYMA
        MSVLRKAKAEAKAEEKVEKELAKARVEVAHEVRLAKEAEAEMDLHVARAGMIAENEMA YANNPPTSFVPSAAA      NISMASGMALDGTPCTIYMA
Subjt:  MSVLRKAKAEAKAEEKVEKELAKARVEVAHEVRLAKEAEAEMDLHVARAGMIAENEMAMYANNPPTSFVPSAAA------NISMASGMALDGTPCTIYMA

Query:  GTPASKKLL
        GTPASKKLL
Subjt:  GTPASKKLL

SwissProt top hitse value%identityAlignment
Q39138 Late embryogenesis abundant protein 61.7e-0441.18Show/hide
Query:  MQAVKEKLHDMSVLRKAK---AEAKAEEKVEKELA--KARVEVAHEVRLAKEAEAEMDLHVARAGMIAENEMAMYANNPPTSFVP
        MQ+ K+K+ DM+   K K    +AKA+EK E+ +A  K   E+AH+ R AKEAEA MD+H+A+A    +  MA  ++   T   P
Subjt:  MQAVKEKLHDMSVLRKAK---AEAKAEEKVEKELA--KARVEVAHEVRLAKEAEAEMDLHVARAGMIAENEMAMYANNPPTSFVP

Arabidopsis top hitse value%identityAlignment
AT1G32560.1 Late embryogenesis abundant protein, group 1 protein1.2e-0541.18Show/hide
Query:  MQAVKEKLHDMSVLRKAK---AEAKAEEKVEKELA--KARVEVAHEVRLAKEAEAEMDLHVARAGMIAENEMAMYANNPPTSFVP
        MQ+ K+K+ DM+   K K    +AKA+EK E+ +A  K   E+AH+ R AKEAEA MD+H+A+A    +  MA  ++   T   P
Subjt:  MQAVKEKLHDMSVLRKAK---AEAKAEEKVEKELA--KARVEVAHEVRLAKEAEAEMDLHVARAGMIAENEMAMYANNPPTSFVP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGCCGTCAAGGAAAAACTCCACGACATGAGCGTCCTGCGCAAGGCCAAGGCCGAGGCAAAGGCCGAAGAGAAGGTTGAGAAGGAGCTAGCAAAGGCAAGA
GTGGAGGTGGCTCATGAGGTAAGACTAGCAAAAGAGGCGGAAGCTGAAATGGATCTTCATGTGGCGAGAGCTGGAATGATTGCTGAGAATGAAATGGCTATGTAT
GCCAATAATCCTCCCACTTCCTTTGTACCTTCCGCCGCCGCCAACATTTCCATGGCCTCCGGCATGGCACTGGACGGAACCCCCTGCACCATCTACATGGCCGGA
ACTCCTGCCTCTAAGAAGTTACTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAGCCGTCAAGGAAAAACTCCACGACATGAGCGTCCTGCGCAAGGCCAAGGCCGAGGCAAAGGCCGAAGAGAAGGTTGAGAAGGAGCTAGCAAAGGCAAGA
GTGGAGGTGGCTCATGAGGTAAGACTAGCAAAAGAGGCGGAAGCTGAAATGGATCTTCATGTGGCGAGAGCTGGAATGATTGCTGAGAATGAAATGGCTATGTAT
GCCAATAATCCTCCCACTTCCTTTGTACCTTCCGCCGCCGCCAACATTTCCATGGCCTCCGGCATGGCACTGGACGGAACCCCCTGCACCATCTACATGGCCGGA
ACTCCTGCCTCTAAGAAGTTACTGTAG
Protein sequenceShow/hide protein sequence
MQAVKEKLHDMSVLRKAKAEAKAEEKVEKELAKARVEVAHEVRLAKEAEAEMDLHVARAGMIAENEMAMYANNPPTSFVPSAAANISMASGMALDGTPCTIYMAG
TPASKKLL