; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Csor.00g257580 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g257580
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionPLASMODESMATA CALLOSE-BINDING PROTEIN 3-like
Genome locationCsor_Chr17:512042..513202
RNA-Seq ExpressionCsor.00g257580
SyntenyCsor.00g257580
Gene Ontology termsGO:0009506 - plasmodesma (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR012946 - X8 domain
IPR044788 - Carbohydrate-binding X8 domain-containing protein, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574856.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 3, partial [Cucurbita argyrosperma subsp. sororia]1.27e-111100Show/hide
Query:  MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATI
        MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATI
Subjt:  MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATI

Query:  AQTDPSYGSCVYPSSIRLDTVGSVWLGPREWSDPTVRMAWIYFQIVNQLFPETVRFGES
        AQTDPSYGSCVYPSSIRLDTVGSVWLGPREWSDPTVRMAWIYFQIVNQLFPETVRFGES
Subjt:  AQTDPSYGSCVYPSSIRLDTVGSVWLGPREWSDPTVRMAWIYFQIVNQLFPETVRFGES

XP_004138961.2 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucumis sativus]3.18e-6172.26Show/hide
Query:  MATLVLSH-SFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSAT
        MAT +LSH SF      FL  TS VDGAYWCVARS+A+YE+LQ ALDYACATGA+CTP++ NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSAT
Subjt:  MATLVLSH-SFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSAT

Query:  IAQTDPSYGSCVYPSSIRLDTVGSVWLGPREWSDPTV
        IAQ+DPSYGSCVYPSS+     G++   P   + PT+
Subjt:  IAQTDPSYGSCVYPSSIRLDTVGSVWLGPREWSDPTV

XP_022959424.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucurbita moschata]6.21e-7588.89Show/hide
Query:  MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATI
        MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATI
Subjt:  MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATI

Query:  AQTDPSYGSCVYPSSIRLDTVGSVWLGPREWSDPT
        AQTDPSYGSCVYPSSI     G++   P   + PT
Subjt:  AQTDPSYGSCVYPSSIRLDTVGSVWLGPREWSDPT

XP_023006227.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucurbita maxima]8.81e-7588.15Show/hide
Query:  MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATI
        MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSAT+
Subjt:  MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATI

Query:  AQTDPSYGSCVYPSSIRLDTVGSVWLGPREWSDPT
        AQTDPSYGSCVYPSSI     G++   P   + PT
Subjt:  AQTDPSYGSCVYPSSIRLDTVGSVWLGPREWSDPT

XP_038875835.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Benincasa hispida]3.43e-6477.94Show/hide
Query:  MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATI
        MATLV SHSFLL    FL+ TSAVDGAYWCVARS+ASYEALQ ALDYACATGADC P+L NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATI
Subjt:  MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATI

Query:  AQTDPSYGSCVYPSSIRLDTVGSVWLGPREWSDPTV
        AQ+DPSYGSCVYPSS      G++   P   + PT+
Subjt:  AQTDPSYGSCVYPSSIRLDTVGSVWLGPREWSDPTV

TrEMBL top hitse value%identityAlignment
A0A0A0LND4 X8 domain-containing protein1.54e-6172.26Show/hide
Query:  MATLVLSH-SFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSAT
        MAT +LSH SF      FL  TS VDGAYWCVARS+A+YE+LQ ALDYACATGA+CTP++ NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSAT
Subjt:  MATLVLSH-SFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSAT

Query:  IAQTDPSYGSCVYPSSIRLDTVGSVWLGPREWSDPTV
        IAQ+DPSYGSCVYPSS+     G++   P   + PT+
Subjt:  IAQTDPSYGSCVYPSSIRLDTVGSVWLGPREWSDPTV

A0A1S3C4M3 PLASMODESMATA CALLOSE-BINDING PROTEIN 32.33e-6171.94Show/hide
Query:  MATLVLSHS---FLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGS
        MAT + SH    FL   L FL+ TSAVDGAYWCVARS+A+YE+LQ A+DYACATGADCTP+L NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDF GS
Subjt:  MATLVLSHS---FLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGS

Query:  ATIAQTDPSYGSCVYPSSIRLDTVGSVWLGPREWSDPTV
        ATIAQ+DPSYGSCVYPSS+     G++   P   + PT+
Subjt:  ATIAQTDPSYGSCVYPSSIRLDTVGSVWLGPREWSDPTV

A0A6J1H812 PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like3.00e-7588.89Show/hide
Query:  MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATI
        MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATI
Subjt:  MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATI

Query:  AQTDPSYGSCVYPSSIRLDTVGSVWLGPREWSDPT
        AQTDPSYGSCVYPSSI     G++   P   + PT
Subjt:  AQTDPSYGSCVYPSSIRLDTVGSVWLGPREWSDPT

A0A6J1KGS7 PLASMODESMATA CALLOSE-BINDING PROTEIN 1-like isoform X29.51e-6082.05Show/hide
Query:  MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATI
        MATL LSHSFLLLL+     TSAV   +WCVARS+ SYEALQTAL+YACATGADCTP+L NG+CFLPNTIQAHASYAFNSFFQRKAMAPGSC+FAGSATI
Subjt:  MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATI

Query:  AQTDPSYGSCVYPSSIR
        A ++PSYGSCVYPSSIR
Subjt:  AQTDPSYGSCVYPSSIR

A0A6J1KVB1 PLASMODESMATA CALLOSE-BINDING PROTEIN 34.27e-7588.15Show/hide
Query:  MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATI
        MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSAT+
Subjt:  MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATI

Query:  AQTDPSYGSCVYPSSIRLDTVGSVWLGPREWSDPT
        AQTDPSYGSCVYPSSI     G++   P   + PT
Subjt:  AQTDPSYGSCVYPSSIRLDTVGSVWLGPREWSDPT

SwissProt top hitse value%identityAlignment
Q84V39 Major pollen allergen Ole e 107.5e-1949.43Show/hide
Query:  WCVARSEASYEALQTALDYACA-TGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQTDPSYGSCVYPS
        WCV ++EA+   LQ+ +DY C+ +G DC P+ +NG CF PNT++AHASYA NS++Q K      CDF+G+  I  +DPS GSC + S
Subjt:  WCVARSEASYEALQTALDYACA-TGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQTDPSYGSCVYPS

Q9FNQ2 PLASMODESMATA CALLOSE-BINDING PROTEIN 19.4e-2247.12Show/hide
Query:  LLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQTDPSYGSCV
        L+L L LL  +    A WCV ++  S   LQ  LDYAC  GADC P      CF P+ +++H +YA NSFFQ+K  +PGSC+F G+AT   +DPSY  C 
Subjt:  LLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQTDPSYGSCV

Query:  YPSS
        +P+S
Subjt:  YPSS

Q9FZ86 PLASMODESMATA CALLOSE-BINDING PROTEIN 35.0e-2347.62Show/hide
Query:  LLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQTDPSYGSC
        + +L++ LL  +      WCV +   S   LQ  LDYAC  GADC P+   G CF PNT+++H SYA NSFFQ+K  + G+CDFAG+AT + +DPSY +C
Subjt:  LLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQTDPSYGSC

Query:  VYPSS
         +P+S
Subjt:  VYPSS

Q9M069 Glucan endo-1,3-beta-glucosidase 72.0e-1943.62Show/hide
Query:  PTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQTDPSYGSCVYP
        P+  V  + WCV +  A+ E LQ +LD+AC  G DC  +   G CF PN + +HA+YA N +FQ+    P  CDF+ +AT+   +PSY +CVYP
Subjt:  PTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQTDPSYGSCVYP

Q9SD84 PLASMODESMATA CALLOSE-BINDING PROTEIN 24.2e-2249.04Show/hide
Query:  LLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQTDPSYGSCV
        L+L L  L  +    A WCV ++  S   LQ  LDYAC  GADC P    G CF P+ ++AH +YA NSFFQ+K  A  SC+F G+AT+  TDPSY  C 
Subjt:  LLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQTDPSYGSCV

Query:  YPSS
        +PSS
Subjt:  YPSS

Arabidopsis top hitse value%identityAlignment
AT1G18650.1 plasmodesmata callose-binding protein 33.6e-2447.62Show/hide
Query:  LLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQTDPSYGSC
        + +L++ LL  +      WCV +   S   LQ  LDYAC  GADC P+   G CF PNT+++H SYA NSFFQ+K  + G+CDFAG+AT + +DPSY +C
Subjt:  LLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQTDPSYGSC

Query:  VYPSS
         +P+S
Subjt:  VYPSS

AT2G05790.1 O-Glycosyl hydrolases family 17 protein3.7e-2146.32Show/hide
Query:  TSAVDGAYWCVARSEASYEALQTALDYACAT-GADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQTDPSYGSCVYPS
        + +++G  WCVA  +A  E LQ  LDYAC   GADC P+     C+ P+T++AHAS+AFNS++Q+K  A GSC F G+A +    P YG C +P+
Subjt:  TSAVDGAYWCVARSEASYEALQTALDYACAT-GADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQTDPSYGSCVYPS

AT4G13600.1 Carbohydrate-binding X8 domain superfamily protein3.3e-3866.67Show/hide
Query:  MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATI
        MA  + + SFLLLLL           A WCVAR + + +ALQ ALDYACA GADC P+  NGLCFLPNT+QAHASYAFNS+FQR AMAPGSC+FAG++TI
Subjt:  MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATI

Query:  AQTDPSYGSCVYPSSIR
        A+TDPSYGSCVYP+S+R
Subjt:  AQTDPSYGSCVYPSSIR

AT5G08000.1 glucan endo-1,3-beta-glucosidase-like protein 33.0e-2349.04Show/hide
Query:  LLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQTDPSYGSCV
        L+L L  L  +    A WCV ++  S   LQ  LDYAC  GADC P    G CF P+ ++AH +YA NSFFQ+K  A  SC+F G+AT+  TDPSY  C 
Subjt:  LLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQTDPSYGSCV

Query:  YPSS
        +PSS
Subjt:  YPSS

AT5G61130.1 plasmodesmata callose-binding protein 16.7e-2347.12Show/hide
Query:  LLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQTDPSYGSCV
        L+L L LL  +    A WCV ++  S   LQ  LDYAC  GADC P      CF P+ +++H +YA NSFFQ+K  +PGSC+F G+AT   +DPSY  C 
Subjt:  LLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQTDPSYGSCV

Query:  YPSS
        +P+S
Subjt:  YPSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACACTTGTTCTCTCCCACTCCTTCCTCCTCCTCCTCCTCCTCTTCCTCCTCCCAACCTCCGCCGTCGACGGCGCGTACTGGTGCGTGGCCCGCAGCGAGGCCAG
CTACGAAGCCCTTCAAACCGCCCTCGACTACGCATGCGCCACCGGCGCCGACTGCACTCCGCTTCTGTCGAACGGACTCTGCTTCCTCCCGAACACCATCCAGGCCCACG
CCTCCTACGCTTTCAACAGCTTCTTCCAGCGCAAGGCTATGGCCCCTGGCTCCTGTGACTTCGCCGGCTCCGCCACCATCGCCCAGACTGACCCCAGTTATGGATCTTGT
GTTTATCCATCTTCAATCAGGTTAGACACCGTTGGATCAGTCTGGCTGGGGCCCAGGGAGTGGTCAGATCCAACGGTGAGGATGGCATGGATTTACTTTCAAATTGTAAA
TCAGCTTTTTCCTGAAACGGTGCGTTTTGGGGAGTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCACACTTGTTCTCTCCCACTCCTTCCTCCTCCTCCTCCTCCTCTTCCTCCTCCCAACCTCCGCCGTCGACGGCGCGTACTGGTGCGTGGCCCGCAGCGAGGCCAG
CTACGAAGCCCTTCAAACCGCCCTCGACTACGCATGCGCCACCGGCGCCGACTGCACTCCGCTTCTGTCGAACGGACTCTGCTTCCTCCCGAACACCATCCAGGCCCACG
CCTCCTACGCTTTCAACAGCTTCTTCCAGCGCAAGGCTATGGCCCCTGGCTCCTGTGACTTCGCCGGCTCCGCCACCATCGCCCAGACTGACCCCAGTTATGGATCTTGT
GTTTATCCATCTTCAATCAGGTTAGACACCGTTGGATCAGTCTGGCTGGGGCCCAGGGAGTGGTCAGATCCAACGGTGAGGATGGCATGGATTTACTTTCAAATTGTAAA
TCAGCTTTTTCCTGAAACGGTGCGTTTTGGGGAGTCTTGA
Protein sequenceShow/hide protein sequence
MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQTDPSYGSC
VYPSSIRLDTVGSVWLGPREWSDPTVRMAWIYFQIVNQLFPETVRFGES